RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
CAPN1-221ENST00000531068 IQGAP3Q86VI3 1631 aa16.4■□□□□ 0.22
CAPN1-221ENST00000531068 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
CAPN1-221ENST00000531068 KDM5AP29375 1690 aaKnown RBP16.39■□□□□ 0.21
CAPN1-221ENST00000531068 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
CAPN1-221ENST00000531068 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-221ENST00000531068 ZFYVE9O95405 1425 aa16.37■□□□□ 0.21
CAPN1-221ENST00000531068 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
CAPN1-221ENST00000531068 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-221ENST00000531068 GCC2Q8IWJ2 1684 aa16.35■□□□□ 0.21
CAPN1-221ENST00000531068 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-221ENST00000531068 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-221ENST00000531068 E9PCH4 1651 aa16.33■□□□□ 0.2
CAPN1-221ENST00000531068 TMEM94Q12767 1356 aa16.32■□□□□ 0.2
CAPN1-221ENST00000531068 MPHOSPH9Q99550 1183 aa16.32■□□□□ 0.2
CAPN1-221ENST00000531068 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
CAPN1-221ENST00000531068 HSPA1LP34931 641 aa16.31■□□□□ 0.2
CAPN1-221ENST00000531068 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-221ENST00000531068 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
CAPN1-221ENST00000531068 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
CAPN1-221ENST00000531068 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
CAPN1-221ENST00000531068 FOXD1Q16676 465 aa16.27■□□□□ 0.2
CAPN1-221ENST00000531068 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
CAPN1-221ENST00000531068 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
CAPN1-221ENST00000531068 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
CAPN1-221ENST00000531068 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
CAPN1-221ENST00000531068 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
CAPN1-221ENST00000531068 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
CAPN1-221ENST00000531068 NCOA3Q9Y6Q9 1424 aa16.25■□□□□ 0.19
CAPN1-221ENST00000531068 MSH6P52701 1360 aa16.25■□□□□ 0.19
CAPN1-221ENST00000531068 TRPM2O94759 1503 aa16.24■□□□□ 0.19
CAPN1-221ENST00000531068 HRCP23327 699 aa16.23■□□□□ 0.19
CAPN1-221ENST00000531068 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
CAPN1-221ENST00000531068 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
CAPN1-221ENST00000531068 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
CAPN1-221ENST00000531068 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
CAPN1-221ENST00000531068 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
CAPN1-221ENST00000531068 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.18
CAPN1-221ENST00000531068 ATF3P18847 181 aa16.2■□□□□ 0.18
CAPN1-221ENST00000531068 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
CAPN1-221ENST00000531068 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
CAPN1-221ENST00000531068 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
CAPN1-221ENST00000531068 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
CAPN1-221ENST00000531068 METP08581 1390 aa16.18■□□□□ 0.18
CAPN1-221ENST00000531068 SPHKAPQ2M3C7 1700 aa16.18■□□□□ 0.18
CAPN1-221ENST00000531068 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
CAPN1-221ENST00000531068 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
CAPN1-221ENST00000531068 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
CAPN1-221ENST00000531068 PTPRUQ92729 1446 aa16.16■□□□□ 0.18
CAPN1-221ENST00000531068 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
CAPN1-221ENST00000531068 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
CAPN1-221ENST00000531068 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
CAPN1-221ENST00000531068 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
CAPN1-221ENST00000531068 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
CAPN1-221ENST00000531068 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
CAPN1-221ENST00000531068 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-221ENST00000531068 CHD2O14647 1828 aaKnown RBP16.08■□□□□ 0.17
CAPN1-221ENST00000531068 ILDR2Q71H61 639 aa16.08■□□□□ 0.16
CAPN1-221ENST00000531068 DCCP43146 1447 aa16.08■□□□□ 0.16
CAPN1-221ENST00000531068 STAC3Q96MF2 364 aa16.06■□□□□ 0.16
CAPN1-221ENST00000531068 KIF1BO60333 1816 aa16.05■□□□□ 0.16
CAPN1-221ENST00000531068 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
CAPN1-221ENST00000531068 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
CAPN1-221ENST00000531068 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
CAPN1-221ENST00000531068 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
CAPN1-221ENST00000531068 STK26Q9P289 416 aa16.04■□□□□ 0.16
CAPN1-221ENST00000531068 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
CAPN1-221ENST00000531068 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
CAPN1-221ENST00000531068 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
CAPN1-221ENST00000531068 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
CAPN1-221ENST00000531068 JCADQ9P266 1359 aa16.02■□□□□ 0.16
CAPN1-221ENST00000531068 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.16
CAPN1-221ENST00000531068 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
CAPN1-221ENST00000531068 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
CAPN1-221ENST00000531068 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
CAPN1-221ENST00000531068 SOCS7O14512 581 aa16■□□□□ 0.15
CAPN1-221ENST00000531068 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
CAPN1-221ENST00000531068 DCAF11Q8TEB1 546 aa16■□□□□ 0.15
CAPN1-221ENST00000531068 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
CAPN1-221ENST00000531068 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
CAPN1-221ENST00000531068 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
CAPN1-221ENST00000531068 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
CAPN1-221ENST00000531068 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
CAPN1-221ENST00000531068 MST1RQ04912 1400 aa15.99■□□□□ 0.15
CAPN1-221ENST00000531068 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
CAPN1-221ENST00000531068 MED1Q15648 1581 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-221ENST00000531068 WAPLQ7Z5K2 1190 aa15.98■□□□□ 0.15
CAPN1-221ENST00000531068 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
CAPN1-221ENST00000531068 TECPR2O15040 1411 aa15.96■□□□□ 0.15
CAPN1-221ENST00000531068 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-221ENST00000531068 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
CAPN1-221ENST00000531068 MYOM2P54296 1465 aa15.95■□□□□ 0.14
CAPN1-221ENST00000531068 C1orf167Q5SNV9 1468 aa15.95■□□□□ 0.14
CAPN1-221ENST00000531068 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
CAPN1-221ENST00000531068 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
CAPN1-221ENST00000531068 PPLO60437 1756 aa15.93■□□□□ 0.14
CAPN1-221ENST00000531068 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
CAPN1-221ENST00000531068 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
CAPN1-221ENST00000531068 POGKQ9P215 609 aa15.93■□□□□ 0.14
CAPN1-221ENST00000531068 RGS17Q9UGC6 210 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms