RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MAP3K4Q9Y6R4 1608 aa23.1■■□□□ 1.29
BRCA2-204ENST00000530893 IFT172Q9UG01 1749 aa23.08■■□□□ 1.28
BRCA2-204ENST00000530893 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.28
BRCA2-204ENST00000530893 PPRC1Q5VV67 1664 aaKnown RBP23.07■■□□□ 1.28
BRCA2-204ENST00000530893 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
BRCA2-204ENST00000530893 CD109Q6YHK3 1445 aa23.06■■□□□ 1.28
BRCA2-204ENST00000530893 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
BRCA2-204ENST00000530893 CC2D1BQ5T0F9 858 aaKnown RBP23.05■■□□□ 1.28
BRCA2-204ENST00000530893 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
BRCA2-204ENST00000530893 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
BRCA2-204ENST00000530893 ABCA6Q8N139 1617 aa23.02■■□□□ 1.28
BRCA2-204ENST00000530893 B4GALNT3Q6L9W6 998 aa23.02■■□□□ 1.28
BRCA2-204ENST00000530893 KNSTRNQ9Y448 316 aa23.02■■□□□ 1.28
BRCA2-204ENST00000530893 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
BRCA2-204ENST00000530893 KDM5AP29375 1690 aaKnown RBP23.01■■□□□ 1.27
BRCA2-204ENST00000530893 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
BRCA2-204ENST00000530893 MYOM1P52179 1685 aa23■■□□□ 1.27
BRCA2-204ENST00000530893 ADGRB3O60242 1522 aa22.99■■□□□ 1.27
BRCA2-204ENST00000530893 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
BRCA2-204ENST00000530893 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
BRCA2-204ENST00000530893 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
BRCA2-204ENST00000530893 NEO1Q92859 1461 aa22.97■■□□□ 1.27
BRCA2-204ENST00000530893 MYO3AQ8NEV4 1616 aa22.97■■□□□ 1.27
BRCA2-204ENST00000530893 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
BRCA2-204ENST00000530893 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
BRCA2-204ENST00000530893 SBNO2Q9Y2G9 1366 aa22.96■■□□□ 1.27
BRCA2-204ENST00000530893 FANCIQ9NVI1 1328 aa22.96■■□□□ 1.27
BRCA2-204ENST00000530893 PIK3C2GO75747 1445 aa22.93■■□□□ 1.26
BRCA2-204ENST00000530893 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
BRCA2-204ENST00000530893 NPATQ14207 1427 aa22.93■■□□□ 1.26
BRCA2-204ENST00000530893 CFAP70Q5T0N1 1121 aa22.92■■□□□ 1.26
BRCA2-204ENST00000530893 RCAN3Q9UKA8 241 aa22.92■■□□□ 1.26
BRCA2-204ENST00000530893 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
BRCA2-204ENST00000530893 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
BRCA2-204ENST00000530893 CCDC136Q96JN2 1154 aa22.92■■□□□ 1.26
BRCA2-204ENST00000530893 ANP32EQ9BTT0 268 aa22.91■■□□□ 1.26
BRCA2-204ENST00000530893 ERVK-7P63135 1459 aa22.91■■□□□ 1.26
BRCA2-204ENST00000530893 PPLO60437 1756 aa22.9■■□□□ 1.26
BRCA2-204ENST00000530893 RPGRIP1LQ68CZ1 1315 aa22.89■■□□□ 1.25
BRCA2-204ENST00000530893 ABCC3O15438 1527 aa22.89■■□□□ 1.25
BRCA2-204ENST00000530893 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.25
BRCA2-204ENST00000530893 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
BRCA2-204ENST00000530893 NOS1P29475 1434 aa22.87■■□□□ 1.25
BRCA2-204ENST00000530893 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
BRCA2-204ENST00000530893 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.25
BRCA2-204ENST00000530893 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
BRCA2-204ENST00000530893 GGT6Q6P531 493 aa22.84■■□□□ 1.25
BRCA2-204ENST00000530893 SALL2Q9Y467 1007 aaPredicted RBP22.84■■□□□ 1.25
BRCA2-204ENST00000530893 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
BRCA2-204ENST00000530893 C14orf93Q9H972 538 aaKnown RBP22.82■■□□□ 1.24
BRCA2-204ENST00000530893 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
BRCA2-204ENST00000530893 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
BRCA2-204ENST00000530893 CENPJQ9HC77 1338 aaPredicted RBP22.81■■□□□ 1.24
BRCA2-204ENST00000530893 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
BRCA2-204ENST00000530893 CDCA7LQ96GN5 454 aa22.81■■□□□ 1.24
BRCA2-204ENST00000530893 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
BRCA2-204ENST00000530893 RICTORQ6R327 1708 aa22.79■■□□□ 1.24
BRCA2-204ENST00000530893 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
BRCA2-204ENST00000530893 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
BRCA2-204ENST00000530893 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
BRCA2-204ENST00000530893 SIGLEC1Q9BZZ2 1709 aa22.76■■□□□ 1.23
BRCA2-204ENST00000530893 ZNF521Q96K83 1311 aa22.74■■□□□ 1.23
BRCA2-204ENST00000530893 GLI2P10070 1586 aa22.74■■□□□ 1.23
BRCA2-204ENST00000530893 RAPGEF3O95398 923 aa22.74■■□□□ 1.23
BRCA2-204ENST00000530893 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
BRCA2-204ENST00000530893 PUS7Q96PZ0 661 aaKnown RBP22.73■■□□□ 1.23
BRCA2-204ENST00000530893 EXOC6Q8TAG9 804 aa22.72■■□□□ 1.23
BRCA2-204ENST00000530893 CARD14Q9BXL6 1004 aa22.72■■□□□ 1.23
BRCA2-204ENST00000530893 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
BRCA2-204ENST00000530893 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
BRCA2-204ENST00000530893 PLEKHH1Q9ULM0 1364 aa22.71■■□□□ 1.23
BRCA2-204ENST00000530893 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
BRCA2-204ENST00000530893 MSH5O43196 834 aa22.7■■□□□ 1.22
BRCA2-204ENST00000530893 ZFYVE9O95405 1425 aa22.7■■□□□ 1.22
BRCA2-204ENST00000530893 GOLGA2Q08379 1002 aa22.69■■□□□ 1.22
BRCA2-204ENST00000530893 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
BRCA2-204ENST00000530893 POLR3AO14802 1390 aaPredicted RBP22.68■■□□□ 1.22
BRCA2-204ENST00000530893 SLC52A1Q9NWF4 448 aa22.68■■□□□ 1.22
BRCA2-204ENST00000530893 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
BRCA2-204ENST00000530893 ARHGEF28Q8N1W1 1705 aaKnown RBP22.65■■□□□ 1.22
BRCA2-204ENST00000530893 NSD3Q9BZ95 1437 aa22.64■■□□□ 1.21
BRCA2-204ENST00000530893 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 TRMT2AQ8IZ69 625 aaKnown RBP22.62■■□□□ 1.21
BRCA2-204ENST00000530893 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 YEATS2Q9ULM3 1422 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 TCERG1O14776 1098 aaKnown RBP22.62■■□□□ 1.21
BRCA2-204ENST00000530893 TMEM132EQ6IEE7 984 aa22.62■■□□□ 1.21
BRCA2-204ENST00000530893 EVC2Q86UK5 1308 aa22.61■■□□□ 1.21
BRCA2-204ENST00000530893 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
BRCA2-204ENST00000530893 IDI1Q13907 227 aa22.59■■□□□ 1.21
BRCA2-204ENST00000530893 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
BRCA2-204ENST00000530893 NSD2O96028 1365 aa22.58■■□□□ 1.21
BRCA2-204ENST00000530893 TMEM131LA2VDJ0 1609 aa22.58■■□□□ 1.21
BRCA2-204ENST00000530893 PLIN1O60240 522 aa22.58■■□□□ 1.2
BRCA2-204ENST00000530893 MORC1Q86VD1 984 aa22.58■■□□□ 1.2
BRCA2-204ENST00000530893 SLC12A5Q9H2X9 1139 aa22.58■■□□□ 1.2
BRCA2-204ENST00000530893 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 264.9 ms