RNA–Protein interactions for RNA: ENST00000530869.1

CHRNA6-203, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 4

Gene CHRNA6, Length 608 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-203ENST00000530869 TICAM2Q86XR7 235 aa8.18□□□□□ -1.1
CHRNA6-203ENST00000530869 GAPVD1Q14C86 1478 aa8.18□□□□□ -1.1
CHRNA6-203ENST00000530869 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
CHRNA6-203ENST00000530869 HOXB1P14653 301 aaPredicted RBP8.17□□□□□ -1.1
CHRNA6-203ENST00000530869 FECHP22830 423 aa8.17□□□□□ -1.1
CHRNA6-203ENST00000530869 ZNF710Q8N1W2 664 aa8.17□□□□□ -1.1
CHRNA6-203ENST00000530869 IFT140Q96RY7 1462 aa8.17□□□□□ -1.1
CHRNA6-203ENST00000530869 IRF6O14896 467 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 TRIM66O15016 1216 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 MAP3K7O43318 606 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 RAD21O60216 631 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 KCTD17Q8N5Z5 321 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
CHRNA6-203ENST00000530869 CLSTN1O94985 981 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 LHX8Q68G74 356 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 ZNF454Q8N9F8 522 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 CCDC102AQ96A19 550 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 LHX6Q9UPM6 363 aa8.15□□□□□ -1.1
CHRNA6-203ENST00000530869 SPATA31D1Q6ZQQ2 1576 aa8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 PSDA5PKW4 1024 aaPredicted RBP8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 ADAM33Q9BZ11 813 aa8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.14□□□□□ -1.11
CHRNA6-203ENST00000530869 NEUROD2Q15784 382 aa8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 AMHR2Q16671 573 aa8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 CERKQ8TCT0 537 aa8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 KDM6BO15054 1643 aa8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHRNA6-203ENST00000530869 PDE4DQ08499 809 aa8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 TTC13Q8NBP0 860 aa8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 CCDC136Q96JN2 1154 aa8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 PSMD1Q99460 953 aa8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 EIF4G3O43432 1585 aaKnown RBP8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
CHRNA6-203ENST00000530869 PPP4R3BQ5MIZ7 849 aa8.11□□□□□ -1.11
CHRNA6-203ENST00000530869 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
CHRNA6-203ENST00000530869 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
CHRNA6-203ENST00000530869 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
CHRNA6-203ENST00000530869 TOPBP1Q92547 1522 aa8.09□□□□□ -1.11
CHRNA6-203ENST00000530869 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
CHRNA6-203ENST00000530869 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
CHRNA6-203ENST00000530869 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
CHRNA6-203ENST00000530869 PARP9Q8IXQ6 854 aa8.07□□□□□ -1.12
CHRNA6-203ENST00000530869 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
CHRNA6-203ENST00000530869 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
CHRNA6-203ENST00000530869 ARID4BQ4LE39 1312 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 A0A0U1RQG5 324 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 PPP1R3GB7ZBB8 358 aa8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 C1orf115Q9H7X2 142 aa8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 MTMR7Q9Y216 660 aa8.06□□□□□ -1.12
CHRNA6-203ENST00000530869 COL9A1P20849 921 aa8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 PRSS12P56730 875 aa8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 ABCC10Q5T3U5 1492 aa8.05□□□□□ -1.12
CHRNA6-203ENST00000530869 WRNQ14191 1432 aaPredicted RBP eCLIP8.04□□□□□ -1.12
CHRNA6-203ENST00000530869 ADGRG1Q9Y653 693 aa8.04□□□□□ -1.12
CHRNA6-203ENST00000530869 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 CUX1P39880 1505 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 SYNJ1O43426 1573 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 POLA1P09884 1462 aaPredicted RBP8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 PTPREP23469 700 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 METTL3Q86U44 580 aaKnown RBP8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 CDCA7LQ96GN5 454 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 SOGA1O94964 1423 aa8.03□□□□□ -1.12
CHRNA6-203ENST00000530869 ST18O60284 1047 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 AAMPQ13685 434 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 CC2D2BQ6DHV5 1058 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 FAM177A1Q8N128 213 aaPredicted RBP8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 FAM198AQ9UFP1 575 aa8.02□□□□□ -1.13
CHRNA6-203ENST00000530869 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 OATP04181 439 aa8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 FOXD4L5Q5VV16 416 aaPredicted RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 FOXD4L4Q8WXT5 416 aaPredicted RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 ZNF428Q96B54 188 aa8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 CWC22Q9HCG8 908 aaKnown RBP8.01□□□□□ -1.13
CHRNA6-203ENST00000530869 GIGYF2Q6Y7W6 1299 aaKnown RBP8□□□□□ -1.13
CHRNA6-203ENST00000530869 TSKSQ9UJT2 592 aa8□□□□□ -1.13
CHRNA6-203ENST00000530869 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
CHRNA6-203ENST00000530869 ONECUT3O60422 494 aaPredicted RBP7.99□□□□□ -1.13
CHRNA6-203ENST00000530869 TOP2BQ02880 1626 aa7.99□□□□□ -1.13
CHRNA6-203ENST00000530869 TARBP1Q13395 1621 aaKnown RBP7.99□□□□□ -1.13
CHRNA6-203ENST00000530869 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
CHRNA6-203ENST00000530869 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms