RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
USP35-206ENST00000530535 PPP6R1Q9UPN7 881 aa20.98■□□□□ 0.95
USP35-206ENST00000530535 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
USP35-206ENST00000530535 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
USP35-206ENST00000530535 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
USP35-206ENST00000530535 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
USP35-206ENST00000530535 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
USP35-206ENST00000530535 KDM2AQ9Y2K7 1162 aa20.96■□□□□ 0.95
USP35-206ENST00000530535 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
USP35-206ENST00000530535 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
USP35-206ENST00000530535 ARHGAP31Q2M1Z3 1444 aa20.95■□□□□ 0.94
USP35-206ENST00000530535 TMC1Q8TDI8 760 aa20.95■□□□□ 0.94
USP35-206ENST00000530535 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
USP35-206ENST00000530535 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
USP35-206ENST00000530535 MLECQ14165 292 aa20.93■□□□□ 0.94
USP35-206ENST00000530535 RALBP1Q15311 655 aa20.92■□□□□ 0.94
USP35-206ENST00000530535 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
USP35-206ENST00000530535 LAMC1P11047 1609 aa20.91■□□□□ 0.94
USP35-206ENST00000530535 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
USP35-206ENST00000530535 GPRASP1Q5JY77 1395 aa20.9■□□□□ 0.94
USP35-206ENST00000530535 NOS1P29475 1434 aa20.89■□□□□ 0.94
USP35-206ENST00000530535 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
USP35-206ENST00000530535 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.93
USP35-206ENST00000530535 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
USP35-206ENST00000530535 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
USP35-206ENST00000530535 CLTCQ00610 1675 aaKnown RBP20.84■□□□□ 0.93
USP35-206ENST00000530535 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
USP35-206ENST00000530535 KIF1BO60333 1816 aa20.84■□□□□ 0.93
USP35-206ENST00000530535 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
USP35-206ENST00000530535 ERICH6Q7L0X2 663 aa20.83■□□□□ 0.93
USP35-206ENST00000530535 STAC3Q96MF2 364 aa20.83■□□□□ 0.93
USP35-206ENST00000530535 NBPF1Q3BBV0 1214 aa20.83■□□□□ 0.92
USP35-206ENST00000530535 SYNMO15061 1565 aa20.82■□□□□ 0.92
USP35-206ENST00000530535 FBXO31Q5XUX0 539 aaPredicted RBP20.82■□□□□ 0.92
USP35-206ENST00000530535 NLRP13Q86W25 1043 aa20.81■□□□□ 0.92
USP35-206ENST00000530535 SLC52A1Q9NWF4 448 aa20.81■□□□□ 0.92
USP35-206ENST00000530535 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
USP35-206ENST00000530535 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
USP35-206ENST00000530535 IDI1Q13907 227 aa20.79■□□□□ 0.92
USP35-206ENST00000530535 TESK2Q96S53 571 aa20.79■□□□□ 0.92
USP35-206ENST00000530535 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
USP35-206ENST00000530535 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
USP35-206ENST00000530535 ADGRB3O60242 1522 aa20.78■□□□□ 0.92
USP35-206ENST00000530535 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
USP35-206ENST00000530535 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
USP35-206ENST00000530535 ZMYM3Q14202 1370 aa20.78■□□□□ 0.92
USP35-206ENST00000530535 RRP1P56182 461 aaKnown RBP20.77■□□□□ 0.92
USP35-206ENST00000530535 BCL11AQ9H165 835 aa20.76■□□□□ 0.91
USP35-206ENST00000530535 INSRP06213 1382 aa20.74■□□□□ 0.91
USP35-206ENST00000530535 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
USP35-206ENST00000530535 RPGRIP1LQ68CZ1 1315 aa20.73■□□□□ 0.91
USP35-206ENST00000530535 SPATA31D1Q6ZQQ2 1576 aa20.73■□□□□ 0.91
USP35-206ENST00000530535 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
USP35-206ENST00000530535 MADDQ8WXG6 1647 aa20.72■□□□□ 0.91
USP35-206ENST00000530535 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
USP35-206ENST00000530535 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
USP35-206ENST00000530535 MYOM2P54296 1465 aa20.71■□□□□ 0.91
USP35-206ENST00000530535 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
USP35-206ENST00000530535 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
USP35-206ENST00000530535 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
USP35-206ENST00000530535 EXOC6Q8TAG9 804 aa20.69■□□□□ 0.9
USP35-206ENST00000530535 PANK3Q9H999 370 aa20.66■□□□□ 0.9
USP35-206ENST00000530535 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
USP35-206ENST00000530535 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
USP35-206ENST00000530535 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
USP35-206ENST00000530535 PPLO60437 1756 aa20.66■□□□□ 0.9
USP35-206ENST00000530535 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
USP35-206ENST00000530535 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
USP35-206ENST00000530535 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
USP35-206ENST00000530535 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
USP35-206ENST00000530535 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
USP35-206ENST00000530535 TMF1P82094 1093 aa20.63■□□□□ 0.89
USP35-206ENST00000530535 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
USP35-206ENST00000530535 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
USP35-206ENST00000530535 TNRQ92752 1358 aa20.62■□□□□ 0.89
USP35-206ENST00000530535 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
USP35-206ENST00000530535 IPO9Q96P70 1041 aaKnown RBP20.62■□□□□ 0.89
USP35-206ENST00000530535 MYO5BQ9ULV0 1848 aa20.62■□□□□ 0.89
USP35-206ENST00000530535 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
USP35-206ENST00000530535 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
USP35-206ENST00000530535 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
USP35-206ENST00000530535 ANP32AP39687 249 aaKnown RBP20.6■□□□□ 0.89
USP35-206ENST00000530535 PIK3C2GO75747 1445 aa20.6■□□□□ 0.89
USP35-206ENST00000530535 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
USP35-206ENST00000530535 A2ML1A8K2U0 1454 aa20.59■□□□□ 0.89
USP35-206ENST00000530535 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
USP35-206ENST00000530535 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
USP35-206ENST00000530535 C3P01024 1663 aa20.57■□□□□ 0.88
USP35-206ENST00000530535 SCAF11Q99590 1463 aaKnown RBP20.55■□□□□ 0.88
USP35-206ENST00000530535 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
USP35-206ENST00000530535 MYOM1P52179 1685 aa20.54■□□□□ 0.88
USP35-206ENST00000530535 SETBP1Q9Y6X0 1596 aa20.52■□□□□ 0.87
USP35-206ENST00000530535 PLIN1O60240 522 aa20.51■□□□□ 0.87
USP35-206ENST00000530535 AMER1Q5JTC6 1135 aaPredicted RBP20.51■□□□□ 0.87
USP35-206ENST00000530535 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
USP35-206ENST00000530535 NLRP1Q9C000 1473 aa20.51■□□□□ 0.87
USP35-206ENST00000530535 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
USP35-206ENST00000530535 MS4A1P11836 297 aa20.5■□□□□ 0.87
USP35-206ENST00000530535 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
USP35-206ENST00000530535 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms