RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 KDM2AQ9Y2K7 1162 aa35.62■■■■□ 3.29
ME3-209ENST00000530520 TMEM2Q9UHN6 1383 aa35.61■■■■□ 3.29
ME3-209ENST00000530520 RIMS2Q9UQ26 1411 aa35.61■■■■□ 3.29
ME3-209ENST00000530520 SLIT1O75093 1534 aa35.58■■■■□ 3.29
ME3-209ENST00000530520 ZFYVE9O95405 1425 aa35.57■■■■□ 3.28
ME3-209ENST00000530520 NUTM2DQ5VT03 806 aaPredicted RBP35.56■■■■□ 3.28
ME3-209ENST00000530520 MYOM2P54296 1465 aa35.56■■■■□ 3.28
ME3-209ENST00000530520 LMTK3Q96Q04 1460 aa35.55■■■■□ 3.28
ME3-209ENST00000530520 ARHGAP23Q9P227 1491 aa35.55■■■■□ 3.28
ME3-209ENST00000530520 HDGFP51858 240 aaKnown RBP35.53■■■■□ 3.28
ME3-209ENST00000530520 STAC3Q96MF2 364 aa35.53■■■■□ 3.28
ME3-209ENST00000530520 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.52■■■■□ 3.28
ME3-209ENST00000530520 VGFO15240 615 aaPredicted RBP35.51■■■■□ 3.28
ME3-209ENST00000530520 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
ME3-209ENST00000530520 EID1Q9Y6B2 187 aa35.5■■■■□ 3.27
ME3-209ENST00000530520 ADGRF5Q8IZF2 1346 aa35.48■■■■□ 3.27
ME3-209ENST00000530520 TXNDC2Q86VQ3 553 aa35.47■■■■□ 3.27
ME3-209ENST00000530520 PRAG1Q86YV5 1406 aa35.46■■■■□ 3.27
ME3-209ENST00000530520 SCAF11Q99590 1463 aaKnown RBP35.46■■■■□ 3.27
ME3-209ENST00000530520 NRXN1Q9ULB1 1477 aa35.45■■■■□ 3.27
ME3-209ENST00000530520 LTKP29376 864 aa35.44■■■■□ 3.26
ME3-209ENST00000530520 POLR1AO95602 1720 aaPredicted RBP35.44■■■■□ 3.26
ME3-209ENST00000530520 HSPA2P54652 639 aa35.42■■■■□ 3.26
ME3-209ENST00000530520 ANKLE2Q86XL3 938 aa35.42■■■■□ 3.26
ME3-209ENST00000530520 PIK3C2GO75747 1445 aa35.4■■■■□ 3.26
ME3-209ENST00000530520 NBPF8Q3BBV2 869 aa35.4■■■■□ 3.26
ME3-209ENST00000530520 SENP3Q9H4L4 574 aaPredicted RBP35.4■■■■□ 3.26
ME3-209ENST00000530520 AEBP2Q6ZN18 517 aaPredicted RBP35.38■■■■□ 3.25
ME3-209ENST00000530520 PLEKHG1Q9ULL1 1385 aa35.36■■■■□ 3.25
ME3-209ENST00000530520 TRPM1Q7Z4N2 1603 aa35.36■■■■□ 3.25
ME3-209ENST00000530520 IQGAP1P46940 1657 aa35.36■■■■□ 3.25
ME3-209ENST00000530520 BCANQ96GW7 911 aa35.35■■■■□ 3.25
ME3-209ENST00000530520 LAMC1P11047 1609 aa35.34■■■■□ 3.25
ME3-209ENST00000530520 SETBP1Q9Y6X0 1596 aa35.34■■■■□ 3.25
ME3-209ENST00000530520 KIAA1210Q9ULL0 1709 aa35.33■■■■□ 3.25
ME3-209ENST00000530520 NRXN3Q9Y4C0 1643 aa35.33■■■■□ 3.25
ME3-209ENST00000530520 NCKAP5LQ9HCH0 1330 aa35.31■■■■□ 3.24
ME3-209ENST00000530520 RALGAPBQ86X10 1494 aa35.3■■■■□ 3.24
ME3-209ENST00000530520 ALKQ9UM73 1620 aa35.28■■■■□ 3.24
ME3-209ENST00000530520 CFAP70Q5T0N1 1121 aa35.28■■■■□ 3.24
ME3-209ENST00000530520 MED14O60244 1454 aa35.27■■■■□ 3.24
ME3-209ENST00000530520 NPHP4O75161 1426 aaPredicted RBP35.27■■■■□ 3.24
ME3-209ENST00000530520 STRCQ7RTU9 1775 aa35.26■■■■□ 3.23
ME3-209ENST00000530520 C14orf93Q9H972 538 aaKnown RBP35.25■■■■□ 3.23
ME3-209ENST00000530520 ROCK2O75116 1388 aaKnown RBP35.24■■■■□ 3.23
ME3-209ENST00000530520 SETD1AO15047 1707 aaKnown RBP35.24■■■■□ 3.23
ME3-209ENST00000530520 ADAMTS13Q76LX8 1427 aa35.22■■■■□ 3.23
ME3-209ENST00000530520 DIP2AQ14689 1571 aa35.22■■■■□ 3.23
ME3-209ENST00000530520 NBPF1Q3BBV0 1214 aa35.21■■■■□ 3.23
ME3-209ENST00000530520 SLC26A8Q96RN1 970 aa35.19■■■■□ 3.22
ME3-209ENST00000530520 ADGRB1O14514 1584 aa35.16■■■■□ 3.22
ME3-209ENST00000530520 ASXL1Q8IXJ9 1541 aa35.15■■■■□ 3.22
ME3-209ENST00000530520 CARD11Q9BXL7 1154 aa35.14■■■■□ 3.22
ME3-209ENST00000530520 GPRASP1Q5JY77 1395 aa35.14■■■■□ 3.22
ME3-209ENST00000530520 TMEM132EQ6IEE7 984 aa35.13■■■■□ 3.21
ME3-209ENST00000530520 TBX22Q9Y458 520 aa35.13■■■■□ 3.21
ME3-209ENST00000530520 METP08581 1390 aa35.11■■■■□ 3.21
ME3-209ENST00000530520 YTHDC2Q9H6S0 1430 aaKnown RBP35.05■■■■□ 3.2
ME3-209ENST00000530520 PIK3R4Q99570 1358 aa35.03■■■■□ 3.2
ME3-209ENST00000530520 STK26Q9P289 416 aa35.02■■■■□ 3.2
ME3-209ENST00000530520 DMRT2Q9Y5R5 561 aa35.01■■■■□ 3.2
ME3-209ENST00000530520 CHD2O14647 1828 aaKnown RBP35.01■■■■□ 3.19
ME3-209ENST00000530520 LRPPRCP42704 1394 aaKnown RBP35■■■■□ 3.19
ME3-209ENST00000530520 KNDC1Q76NI1 1749 aa35■■■■□ 3.19
ME3-209ENST00000530520 USP47Q96K76 1375 aa35■■■■□ 3.19
ME3-209ENST00000530520 TRAK1Q9UPV9 953 aa34.98■■■■□ 3.19
ME3-209ENST00000530520 PTPRUQ92729 1446 aa34.98■■■■□ 3.19
ME3-209ENST00000530520 ARHGEF28Q8N1W1 1705 aaKnown RBP34.97■■■■□ 3.19
ME3-209ENST00000530520 XRN1Q8IZH2 1706 aaKnown RBP34.96■■■■□ 3.19
ME3-209ENST00000530520 EIF3AQ14152 1382 aaKnown RBP34.95■■■■□ 3.19
ME3-209ENST00000530520 EIF4G2P78344 907 aaKnown RBP eCLIP34.95■■■■□ 3.18
ME3-209ENST00000530520 ABCC11Q96J66 1382 aa34.94■■■■□ 3.18
ME3-209ENST00000530520 AMOTL2Q9Y2J4 779 aa34.93■■■■□ 3.18
ME3-209ENST00000530520 CPS1P31327 1500 aa34.92■■■■□ 3.18
ME3-209ENST00000530520 DLC1Q96QB1 1528 aa34.92■■■■□ 3.18
ME3-209ENST00000530520 TECPR2O15040 1411 aa34.91■■■■□ 3.18
ME3-209ENST00000530520 NWD1Q149M9 1564 aa34.91■■■■□ 3.18
ME3-209ENST00000530520 HSPA5P11021 654 aaKnown RBP34.89■■■■□ 3.18
ME3-209ENST00000530520 KCNA6P17658 529 aa34.87■■■■□ 3.17
ME3-209ENST00000530520 PTCH1Q13635 1447 aa34.85■■■■□ 3.17
ME3-209ENST00000530520 STRCP1A6NGW2 1772 aa34.84■■■■□ 3.17
ME3-209ENST00000530520 ST20-MTHFSA0A0A6YYL1 179 aa34.84■■■■□ 3.17
ME3-209ENST00000530520 QRICH2Q9H0J4 1663 aa34.84■■■■□ 3.17
ME3-209ENST00000530520 PRAM1Q96QH2 718 aa34.83■■■■□ 3.17
ME3-209ENST00000530520 POGKQ9P215 609 aa34.83■■■■□ 3.17
ME3-209ENST00000530520 ROBO2Q9HCK4 1378 aa34.83■■■■□ 3.17
ME3-209ENST00000530520 CENPJQ9HC77 1338 aaPredicted RBP34.83■■■■□ 3.17
ME3-209ENST00000530520 HIRIP3Q9BW71 556 aaPredicted RBP34.83■■■■□ 3.17
ME3-209ENST00000530520 FAM135BQ49AJ0 1406 aa34.82■■■■□ 3.16
ME3-209ENST00000530520 NKTRP30414 1462 aaKnown RBP34.81■■■■□ 3.16
ME3-209ENST00000530520 SIRT1Q96EB6 747 aa34.79■■■■□ 3.16
ME3-209ENST00000530520 ZNF335Q9H4Z2 1342 aaPredicted RBP34.79■■■■□ 3.16
ME3-209ENST00000530520 SAFB2Q14151 953 aaKnown RBP eCLIP34.79■■■■□ 3.16
ME3-209ENST00000530520 WAPLQ7Z5K2 1190 aa34.79■■■■□ 3.16
ME3-209ENST00000530520 PLEKHH1Q9ULM0 1364 aa34.78■■■■□ 3.16
ME3-209ENST00000530520 PROSER2Q86WR7 435 aaPredicted RBP34.7■■■■□ 3.15
ME3-209ENST00000530520 TESK2Q96S53 571 aa34.7■■■■□ 3.14
ME3-209ENST00000530520 SBNO2Q9Y2G9 1366 aa34.7■■■■□ 3.14
ME3-209ENST00000530520 MINK1Q8N4C8 1332 aaPredicted RBP34.69■■■■□ 3.14
ME3-209ENST00000530520 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms