RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 TMEM131LA2VDJ0 1609 aa29.38■■■□□ 2.29
SYVN1-212ENST00000530451 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
SYVN1-212ENST00000530451 NUP155O75694 1391 aa29.35■■■□□ 2.29
SYVN1-212ENST00000530451 RIMS2Q9UQ26 1411 aa29.31■■■□□ 2.28
SYVN1-212ENST00000530451 ZFYVE9O95405 1425 aa29.3■■■□□ 2.28
SYVN1-212ENST00000530451 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
SYVN1-212ENST00000530451 KCNA6P17658 529 aa29.3■■■□□ 2.28
SYVN1-212ENST00000530451 RBM33Q96EV2 1170 aaKnown RBP29.3■■■□□ 2.28
SYVN1-212ENST00000530451 MED1Q15648 1581 aaPredicted RBP29.29■■■□□ 2.28
SYVN1-212ENST00000530451 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
SYVN1-212ENST00000530451 TMEM94Q12767 1356 aa29.27■■■□□ 2.28
SYVN1-212ENST00000530451 CHD2O14647 1828 aaKnown RBP29.27■■■□□ 2.28
SYVN1-212ENST00000530451 PROSER2Q86WR7 435 aaPredicted RBP29.27■■■□□ 2.28
SYVN1-212ENST00000530451 NWD1Q149M9 1564 aa29.25■■■□□ 2.27
SYVN1-212ENST00000530451 HDGFP51858 240 aaKnown RBP29.24■■■□□ 2.27
SYVN1-212ENST00000530451 SPHKAPQ2M3C7 1700 aa29.24■■■□□ 2.27
SYVN1-212ENST00000530451 PLEKHG1Q9ULL1 1385 aa29.24■■■□□ 2.27
SYVN1-212ENST00000530451 RRBP1Q9P2E9 1410 aaKnown RBP29.22■■■□□ 2.27
SYVN1-212ENST00000530451 SOCS7O14512 581 aa29.22■■■□□ 2.27
SYVN1-212ENST00000530451 NKTRP30414 1462 aaKnown RBP29.19■■■□□ 2.26
SYVN1-212ENST00000530451 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.18■■■□□ 2.26
SYVN1-212ENST00000530451 ROBO1Q9Y6N7 1651 aa29.15■■■□□ 2.26
SYVN1-212ENST00000530451 TBX22Q9Y458 520 aa29.12■■■□□ 2.25
SYVN1-212ENST00000530451 NAIPQ13075 1403 aa29.11■■■□□ 2.25
SYVN1-212ENST00000530451 ADAMTS13Q76LX8 1427 aa29.11■■■□□ 2.25
SYVN1-212ENST00000530451 PHF23Q9BUL5 403 aaPredicted RBP29.1■■■□□ 2.25
SYVN1-212ENST00000530451 MSH6P52701 1360 aa29.1■■■□□ 2.25
SYVN1-212ENST00000530451 FAM135BQ49AJ0 1406 aa29.1■■■□□ 2.25
SYVN1-212ENST00000530451 DIP2AQ14689 1571 aa29.08■■■□□ 2.25
SYVN1-212ENST00000530451 KIF1BO60333 1816 aa29.07■■■□□ 2.24
SYVN1-212ENST00000530451 CLTCL1P53675 1640 aa29.07■■■□□ 2.24
SYVN1-212ENST00000530451 ZNF326Q5BKZ1 582 aaKnown RBP29.07■■■□□ 2.24
SYVN1-212ENST00000530451 TRIM52Q96A61 297 aa29.04■■■□□ 2.24
SYVN1-212ENST00000530451 C14orf37Q86TY3 774 aa29.03■■■□□ 2.24
SYVN1-212ENST00000530451 TRPM2O94759 1503 aa29.03■■■□□ 2.24
SYVN1-212ENST00000530451 NRXN3Q9Y4C0 1643 aa29.02■■■□□ 2.24
SYVN1-212ENST00000530451 SLAIN2Q9P270 581 aa29■■■□□ 2.23
SYVN1-212ENST00000530451 PHLPP1O60346 1717 aa29■■■□□ 2.23
SYVN1-212ENST00000530451 SIPA1L2Q9P2F8 1722 aaPredicted RBP29■■■□□ 2.23
SYVN1-212ENST00000530451 HFM1A2PYH4 1435 aa28.98■■■□□ 2.23
SYVN1-212ENST00000530451 PTPRUQ92729 1446 aa28.98■■■□□ 2.23
SYVN1-212ENST00000530451 AMOTL2Q9Y2J4 779 aa28.98■■■□□ 2.23
SYVN1-212ENST00000530451 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
SYVN1-212ENST00000530451 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
SYVN1-212ENST00000530451 NEXMIFQ5QGS0 1516 aa28.94■■■□□ 2.22
SYVN1-212ENST00000530451 NCOA3Q9Y6Q9 1424 aa28.93■■■□□ 2.22
SYVN1-212ENST00000530451 XRN1Q8IZH2 1706 aaKnown RBP28.92■■■□□ 2.22
SYVN1-212ENST00000530451 SLC4A1APQ9BWU0 796 aaKnown RBP28.91■■■□□ 2.22
SYVN1-212ENST00000530451 C19orf44Q9H6X5 657 aa28.89■■■□□ 2.22
SYVN1-212ENST00000530451 METP08581 1390 aa28.88■■■□□ 2.21
SYVN1-212ENST00000530451 ATF3P18847 181 aa28.88■■■□□ 2.21
SYVN1-212ENST00000530451 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
SYVN1-212ENST00000530451 RGS17Q9UGC6 210 aaPredicted RBP28.86■■■□□ 2.21
SYVN1-212ENST00000530451 COL16A1Q07092 1604 aaPredicted RBP28.84■■■□□ 2.21
SYVN1-212ENST00000530451 FOXD1Q16676 465 aa28.84■■■□□ 2.21
SYVN1-212ENST00000530451 PPLO60437 1756 aa28.82■■■□□ 2.2
SYVN1-212ENST00000530451 SETD1AO15047 1707 aaKnown RBP28.79■■■□□ 2.2
SYVN1-212ENST00000530451 JCADQ9P266 1359 aa28.78■■■□□ 2.2
SYVN1-212ENST00000530451 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
SYVN1-212ENST00000530451 VGFO15240 615 aaPredicted RBP28.76■■■□□ 2.19
SYVN1-212ENST00000530451 AHDC1Q5TGY3 1603 aaPredicted RBP28.76■■■□□ 2.19
SYVN1-212ENST00000530451 DCCP43146 1447 aa28.73■■■□□ 2.19
SYVN1-212ENST00000530451 BRINP3Q76B58 766 aa28.73■■■□□ 2.19
SYVN1-212ENST00000530451 RPGRIP1LQ68CZ1 1315 aa28.71■■■□□ 2.19
SYVN1-212ENST00000530451 POTEAQ6S8J7 498 aa28.71■■■□□ 2.19
SYVN1-212ENST00000530451 MST1RQ04912 1400 aa28.7■■■□□ 2.19
SYVN1-212ENST00000530451 SHPRHQ149N8 1683 aa28.7■■■□□ 2.18
SYVN1-212ENST00000530451 ADGRL3Q9HAR2 1447 aa28.69■■■□□ 2.18
SYVN1-212ENST00000530451 MPHOSPH9Q99550 1183 aa28.69■■■□□ 2.18
SYVN1-212ENST00000530451 ASXL1Q8IXJ9 1541 aa28.69■■■□□ 2.18
SYVN1-212ENST00000530451 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
SYVN1-212ENST00000530451 CCDC144AA2RUR9 1427 aa28.67■■■□□ 2.18
SYVN1-212ENST00000530451 LRP6O75581 1613 aa28.66■■■□□ 2.18
SYVN1-212ENST00000530451 NHSL1Q5SYE7 1610 aa28.66■■■□□ 2.18
SYVN1-212ENST00000530451 IFT172Q9UG01 1749 aa28.65■■■□□ 2.18
SYVN1-212ENST00000530451 ROBO2Q9HCK4 1378 aa28.64■■■□□ 2.18
SYVN1-212ENST00000530451 SPATA31A6Q5VVP1 1343 aa28.63■■■□□ 2.17
SYVN1-212ENST00000530451 MEX3CQ5U5Q3 659 aaKnown RBP28.62■■■□□ 2.17
SYVN1-212ENST00000530451 DDX17Q92841 729 aaKnown RBP28.62■■■□□ 2.17
SYVN1-212ENST00000530451 PTCH1Q13635 1447 aa28.61■■■□□ 2.17
SYVN1-212ENST00000530451 ADGRF5Q8IZF2 1346 aa28.61■■■□□ 2.17
SYVN1-212ENST00000530451 NUTM2BA6NNL0 878 aaPredicted RBP28.59■■■□□ 2.17
SYVN1-212ENST00000530451 NUTM2EB1AL46 878 aaPredicted RBP28.59■■■□□ 2.17
SYVN1-212ENST00000530451 NUTM2AQ8IVF1 878 aaPredicted RBP28.59■■■□□ 2.17
SYVN1-212ENST00000530451 SPATA31E1Q6ZUB1 1445 aa28.59■■■□□ 2.17
SYVN1-212ENST00000530451 SETD5Q9C0A6 1442 aa28.58■■■□□ 2.17
SYVN1-212ENST00000530451 C1orf167Q5SNV9 1468 aa28.55■■■□□ 2.16
SYVN1-212ENST00000530451 STK26Q9P289 416 aa28.52■■■□□ 2.16
SYVN1-212ENST00000530451 LRRC59Q96AG4 307 aaKnown RBP28.51■■■□□ 2.15
SYVN1-212ENST00000530451 ORAI2Q96SN7 254 aa28.51■■■□□ 2.15
SYVN1-212ENST00000530451 PRAG1Q86YV5 1406 aa28.51■■■□□ 2.15
SYVN1-212ENST00000530451 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
SYVN1-212ENST00000530451 RAB3GAP2Q9H2M9 1393 aa28.49■■■□□ 2.15
SYVN1-212ENST00000530451 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
SYVN1-212ENST00000530451 ZNF772Q68DY9 489 aaPredicted RBP28.46■■■□□ 2.15
SYVN1-212ENST00000530451 LAMC1P11047 1609 aa28.45■■■□□ 2.14
SYVN1-212ENST00000530451 WAPLQ7Z5K2 1190 aa28.45■■■□□ 2.14
SYVN1-212ENST00000530451 KNDC1Q76NI1 1749 aa28.45■■■□□ 2.14
SYVN1-212ENST00000530451 PIK3C2GO75747 1445 aa28.44■■■□□ 2.14
SYVN1-212ENST00000530451 PNPLA6Q8IY17 1366 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms