RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
LTBP3-216ENST00000530426 PPP1R15AO75807 674 aaPredicted RBP22.01■■□□□ 1.11
LTBP3-216ENST00000530426 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
LTBP3-216ENST00000530426 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
LTBP3-216ENST00000530426 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
LTBP3-216ENST00000530426 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
LTBP3-216ENST00000530426 EID1Q9Y6B2 187 aa21.99■■□□□ 1.11
LTBP3-216ENST00000530426 PPLO60437 1756 aa21.99■■□□□ 1.11
LTBP3-216ENST00000530426 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
LTBP3-216ENST00000530426 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
LTBP3-216ENST00000530426 TXNDC2Q86VQ3 553 aa21.97■■□□□ 1.11
LTBP3-216ENST00000530426 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
LTBP3-216ENST00000530426 BCANQ96GW7 911 aa21.96■■□□□ 1.11
LTBP3-216ENST00000530426 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
LTBP3-216ENST00000530426 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.1
LTBP3-216ENST00000530426 ZFYVE9O95405 1425 aa21.94■■□□□ 1.1
LTBP3-216ENST00000530426 MYOM2P54296 1465 aa21.94■■□□□ 1.1
LTBP3-216ENST00000530426 SLIT1O75093 1534 aa21.94■■□□□ 1.1
LTBP3-216ENST00000530426 HSPA2P54652 639 aa21.93■■□□□ 1.1
LTBP3-216ENST00000530426 ANKLE2Q86XL3 938 aa21.93■■□□□ 1.1
LTBP3-216ENST00000530426 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
LTBP3-216ENST00000530426 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
LTBP3-216ENST00000530426 LTKP29376 864 aa21.92■■□□□ 1.1
LTBP3-216ENST00000530426 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
LTBP3-216ENST00000530426 PRAG1Q86YV5 1406 aa21.9■■□□□ 1.1
LTBP3-216ENST00000530426 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.09
LTBP3-216ENST00000530426 NCKAP5LQ9HCH0 1330 aa21.87■■□□□ 1.09
LTBP3-216ENST00000530426 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
LTBP3-216ENST00000530426 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
LTBP3-216ENST00000530426 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
LTBP3-216ENST00000530426 PLEKHG1Q9ULL1 1385 aa21.85■■□□□ 1.09
LTBP3-216ENST00000530426 POLR1AO95602 1720 aaPredicted RBP21.83■■□□□ 1.08
LTBP3-216ENST00000530426 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
LTBP3-216ENST00000530426 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
LTBP3-216ENST00000530426 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
LTBP3-216ENST00000530426 IQGAP1P46940 1657 aa21.8■■□□□ 1.08
LTBP3-216ENST00000530426 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
LTBP3-216ENST00000530426 SLC26A8Q96RN1 970 aa21.8■■□□□ 1.08
LTBP3-216ENST00000530426 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
LTBP3-216ENST00000530426 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
LTBP3-216ENST00000530426 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
LTBP3-216ENST00000530426 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
LTBP3-216ENST00000530426 LAMC1P11047 1609 aa21.78■■□□□ 1.08
LTBP3-216ENST00000530426 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
LTBP3-216ENST00000530426 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
LTBP3-216ENST00000530426 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.07
LTBP3-216ENST00000530426 TMEM132EQ6IEE7 984 aa21.76■■□□□ 1.07
LTBP3-216ENST00000530426 MED14O60244 1454 aa21.75■■□□□ 1.07
LTBP3-216ENST00000530426 ADAMTS13Q76LX8 1427 aa21.74■■□□□ 1.07
LTBP3-216ENST00000530426 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
LTBP3-216ENST00000530426 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
LTBP3-216ENST00000530426 STK26Q9P289 416 aa21.72■■□□□ 1.07
LTBP3-216ENST00000530426 DIP2AQ14689 1571 aa21.71■■□□□ 1.07
LTBP3-216ENST00000530426 METP08581 1390 aa21.7■■□□□ 1.06
LTBP3-216ENST00000530426 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
LTBP3-216ENST00000530426 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
LTBP3-216ENST00000530426 GPRASP1Q5JY77 1395 aa21.68■■□□□ 1.06
LTBP3-216ENST00000530426 ASXL1Q8IXJ9 1541 aa21.68■■□□□ 1.06
LTBP3-216ENST00000530426 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
LTBP3-216ENST00000530426 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
LTBP3-216ENST00000530426 YTHDC2Q9H6S0 1430 aaKnown RBP21.66■■□□□ 1.06
LTBP3-216ENST00000530426 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
LTBP3-216ENST00000530426 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
LTBP3-216ENST00000530426 USP47Q96K76 1375 aa21.64■■□□□ 1.06
LTBP3-216ENST00000530426 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
LTBP3-216ENST00000530426 PIK3R4Q99570 1358 aa21.62■■□□□ 1.05
LTBP3-216ENST00000530426 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
LTBP3-216ENST00000530426 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
LTBP3-216ENST00000530426 HIRIP3Q9BW71 556 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-216ENST00000530426 PTPRUQ92729 1446 aa21.61■■□□□ 1.05
LTBP3-216ENST00000530426 POGKQ9P215 609 aa21.6■■□□□ 1.05
LTBP3-216ENST00000530426 ABCC11Q96J66 1382 aa21.59■■□□□ 1.05
LTBP3-216ENST00000530426 ST20-MTHFSA0A0A6YYL1 179 aa21.58■■□□□ 1.05
LTBP3-216ENST00000530426 KCNA6P17658 529 aa21.58■■□□□ 1.05
LTBP3-216ENST00000530426 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
LTBP3-216ENST00000530426 CHD2O14647 1828 aaKnown RBP21.57■■□□□ 1.04
LTBP3-216ENST00000530426 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
LTBP3-216ENST00000530426 PRAM1Q96QH2 718 aa21.56■■□□□ 1.04
LTBP3-216ENST00000530426 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-216ENST00000530426 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
LTBP3-216ENST00000530426 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
LTBP3-216ENST00000530426 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
LTBP3-216ENST00000530426 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
LTBP3-216ENST00000530426 SIRT1Q96EB6 747 aa21.53■■□□□ 1.04
LTBP3-216ENST00000530426 CPS1P31327 1500 aa21.53■■□□□ 1.04
LTBP3-216ENST00000530426 TECPR2O15040 1411 aa21.53■■□□□ 1.04
LTBP3-216ENST00000530426 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
LTBP3-216ENST00000530426 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
LTBP3-216ENST00000530426 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-216ENST00000530426 NWD1Q149M9 1564 aa21.51■■□□□ 1.03
LTBP3-216ENST00000530426 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
LTBP3-216ENST00000530426 FAM135BQ49AJ0 1406 aa21.5■■□□□ 1.03
LTBP3-216ENST00000530426 QRICH2Q9H0J4 1663 aa21.5■■□□□ 1.03
LTBP3-216ENST00000530426 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
LTBP3-216ENST00000530426 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
LTBP3-216ENST00000530426 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
LTBP3-216ENST00000530426 C14orf37Q86TY3 774 aa21.47■■□□□ 1.03
LTBP3-216ENST00000530426 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
LTBP3-216ENST00000530426 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
LTBP3-216ENST00000530426 ZNF316A6NFI3 1004 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms