RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
PACSIN3-206ENST00000530405 BCANQ96GW7 911 aa25.67■■□□□ 1.7
PACSIN3-206ENST00000530405 CHD2O14647 1828 aaKnown RBP25.67■■□□□ 1.7
PACSIN3-206ENST00000530405 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
PACSIN3-206ENST00000530405 PLEKHG1Q9ULL1 1385 aa25.65■■□□□ 1.7
PACSIN3-206ENST00000530405 ZFYVE9O95405 1425 aa25.64■■□□□ 1.7
PACSIN3-206ENST00000530405 COL16A1Q07092 1604 aaPredicted RBP25.64■■□□□ 1.7
PACSIN3-206ENST00000530405 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
PACSIN3-206ENST00000530405 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.69
PACSIN3-206ENST00000530405 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
PACSIN3-206ENST00000530405 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
PACSIN3-206ENST00000530405 HDGFP51858 240 aaKnown RBP25.61■■□□□ 1.69
PACSIN3-206ENST00000530405 SPATA31A6Q5VVP1 1343 aa25.61■■□□□ 1.69
PACSIN3-206ENST00000530405 MYO5BQ9ULV0 1848 aa25.59■■□□□ 1.69
PACSIN3-206ENST00000530405 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.69
PACSIN3-206ENST00000530405 TBX22Q9Y458 520 aa25.58■■□□□ 1.69
PACSIN3-206ENST00000530405 ADGRL2O95490 1459 aa25.58■■□□□ 1.69
PACSIN3-206ENST00000530405 LRP6O75581 1613 aa25.57■■□□□ 1.68
PACSIN3-206ENST00000530405 PPP1R15AO75807 674 aaPredicted RBP25.57■■□□□ 1.68
PACSIN3-206ENST00000530405 APLP2Q06481 763 aa25.57■■□□□ 1.68
PACSIN3-206ENST00000530405 GCC2Q8IWJ2 1684 aa25.57■■□□□ 1.68
PACSIN3-206ENST00000530405 TMEM131LA2VDJ0 1609 aa25.56■■□□□ 1.68
PACSIN3-206ENST00000530405 ZNF772Q68DY9 489 aaPredicted RBP25.55■■□□□ 1.68
PACSIN3-206ENST00000530405 AHDC1Q5TGY3 1603 aaPredicted RBP25.54■■□□□ 1.68
PACSIN3-206ENST00000530405 SHPRHQ149N8 1683 aa25.52■■□□□ 1.68
PACSIN3-206ENST00000530405 MEX3CQ5U5Q3 659 aaKnown RBP25.52■■□□□ 1.68
PACSIN3-206ENST00000530405 CADPS2Q86UW7 1296 aa25.52■■□□□ 1.68
PACSIN3-206ENST00000530405 UPF1Q92900 1129 aaKnown RBP eCLIP25.52■■□□□ 1.68
PACSIN3-206ENST00000530405 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.68
PACSIN3-206ENST00000530405 C14orf37Q86TY3 774 aa25.51■■□□□ 1.67
PACSIN3-206ENST00000530405 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.51■■□□□ 1.67
PACSIN3-206ENST00000530405 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
PACSIN3-206ENST00000530405 C19orf44Q9H6X5 657 aa25.5■■□□□ 1.67
PACSIN3-206ENST00000530405 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
PACSIN3-206ENST00000530405 ADAMTS13Q76LX8 1427 aa25.49■■□□□ 1.67
PACSIN3-206ENST00000530405 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
PACSIN3-206ENST00000530405 ATF3P18847 181 aa25.48■■□□□ 1.67
PACSIN3-206ENST00000530405 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
PACSIN3-206ENST00000530405 RXRBP28702 533 aa25.43■■□□□ 1.66
PACSIN3-206ENST00000530405 CDK12Q9NYV4 1490 aaPredicted RBP25.42■■□□□ 1.66
PACSIN3-206ENST00000530405 CHGAP10645 457 aaKnown RBP25.42■■□□□ 1.66
PACSIN3-206ENST00000530405 UNC13BO14795 1591 aa25.41■■□□□ 1.66
PACSIN3-206ENST00000530405 BRINP3Q76B58 766 aa25.4■■□□□ 1.66
PACSIN3-206ENST00000530405 TRPM2O94759 1503 aa25.4■■□□□ 1.66
PACSIN3-206ENST00000530405 E9PCH4 1651 aa25.39■■□□□ 1.66
PACSIN3-206ENST00000530405 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
PACSIN3-206ENST00000530405 DCCP43146 1447 aa25.38■■□□□ 1.65
PACSIN3-206ENST00000530405 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
PACSIN3-206ENST00000530405 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
PACSIN3-206ENST00000530405 PTPRUQ92729 1446 aa25.36■■□□□ 1.65
PACSIN3-206ENST00000530405 SETD5Q9C0A6 1442 aa25.35■■□□□ 1.65
PACSIN3-206ENST00000530405 NUTM2BA6NNL0 878 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-206ENST00000530405 NUTM2EB1AL46 878 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-206ENST00000530405 NUTM2AQ8IVF1 878 aaPredicted RBP25.34■■□□□ 1.65
PACSIN3-206ENST00000530405 ASXL1Q8IXJ9 1541 aa25.33■■□□□ 1.65
PACSIN3-206ENST00000530405 AFF2P51816 1311 aa25.33■■□□□ 1.64
PACSIN3-206ENST00000530405 NHSL1Q5SYE7 1610 aa25.31■■□□□ 1.64
PACSIN3-206ENST00000530405 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
PACSIN3-206ENST00000530405 XRN1Q8IZH2 1706 aaKnown RBP25.3■■□□□ 1.64
PACSIN3-206ENST00000530405 MST1RQ04912 1400 aa25.29■■□□□ 1.64
PACSIN3-206ENST00000530405 LRRC59Q96AG4 307 aaKnown RBP25.28■■□□□ 1.64
PACSIN3-206ENST00000530405 SETBP1Q9Y6X0 1596 aa25.27■■□□□ 1.64
PACSIN3-206ENST00000530405 NRXN3Q9Y4C0 1643 aa25.26■■□□□ 1.63
PACSIN3-206ENST00000530405 ROCK1Q13464 1354 aa25.25■■□□□ 1.63
PACSIN3-206ENST00000530405 RGS12O14924 1447 aa25.23■■□□□ 1.63
PACSIN3-206ENST00000530405 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
PACSIN3-206ENST00000530405 QTRT2Q9H974 415 aaKnown RBP25.22■■□□□ 1.63
PACSIN3-206ENST00000530405 NUP155O75694 1391 aa25.21■■□□□ 1.63
PACSIN3-206ENST00000530405 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
PACSIN3-206ENST00000530405 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
PACSIN3-206ENST00000530405 ADGRL3Q9HAR2 1447 aa25.2■■□□□ 1.62
PACSIN3-206ENST00000530405 METP08581 1390 aa25.19■■□□□ 1.62
PACSIN3-206ENST00000530405 SRCAPQ6ZRS2 3230 aa25.19■■□□□ 1.62
PACSIN3-206ENST00000530405 DDX17Q92841 729 aaKnown RBP25.16■■□□□ 1.62
PACSIN3-206ENST00000530405 SPHKAPQ2M3C7 1700 aa25.15■■□□□ 1.62
PACSIN3-206ENST00000530405 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
PACSIN3-206ENST00000530405 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
PACSIN3-206ENST00000530405 NGLY1Q96IV0 654 aa25.13■■□□□ 1.61
PACSIN3-206ENST00000530405 LAMC1P11047 1609 aa25.12■■□□□ 1.61
PACSIN3-206ENST00000530405 C1orf167Q5SNV9 1468 aa25.1■■□□□ 1.61
PACSIN3-206ENST00000530405 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
PACSIN3-206ENST00000530405 ADAMTS2O95450 1211 aa25.09■■□□□ 1.61
PACSIN3-206ENST00000530405 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
PACSIN3-206ENST00000530405 SOS2Q07890 1332 aaPredicted RBP25.06■■□□□ 1.6
PACSIN3-206ENST00000530405 USP21Q9UK80 565 aa25.04■■□□□ 1.6
PACSIN3-206ENST00000530405 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
PACSIN3-206ENST00000530405 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
PACSIN3-206ENST00000530405 FNBP4Q8N3X1 1017 aaPredicted RBP25.03■■□□□ 1.6
PACSIN3-206ENST00000530405 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
PACSIN3-206ENST00000530405 FOXD1Q16676 465 aa25.01■■□□□ 1.59
PACSIN3-206ENST00000530405 ORAI2Q96SN7 254 aa25■■□□□ 1.59
PACSIN3-206ENST00000530405 EP400Q96L91 3159 aa24.99■■□□□ 1.59
PACSIN3-206ENST00000530405 ATRNO75882 1429 aa24.99■■□□□ 1.59
PACSIN3-206ENST00000530405 COL22A1Q8NFW1 1626 aaPredicted RBP24.99■■□□□ 1.59
PACSIN3-206ENST00000530405 KIF1BO60333 1816 aa24.98■■□□□ 1.59
PACSIN3-206ENST00000530405 PRAG1Q86YV5 1406 aa24.98■■□□□ 1.59
PACSIN3-206ENST00000530405 ITGAEP38570 1179 aa24.98■■□□□ 1.59
PACSIN3-206ENST00000530405 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
PACSIN3-206ENST00000530405 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
PACSIN3-206ENST00000530405 VGFO15240 615 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms