RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS26B-205ENST00000530402 TK2O00142 265 aa12.31□□□□□ -0.44
VPS26B-205ENST00000530402 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
VPS26B-205ENST00000530402 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
VPS26B-205ENST00000530402 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
VPS26B-205ENST00000530402 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
VPS26B-205ENST00000530402 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
VPS26B-205ENST00000530402 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
VPS26B-205ENST00000530402 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
VPS26B-205ENST00000530402 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
VPS26B-205ENST00000530402 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
VPS26B-205ENST00000530402 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
VPS26B-205ENST00000530402 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
VPS26B-205ENST00000530402 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
VPS26B-205ENST00000530402 CD46P15529 392 aa12.26□□□□□ -0.45
VPS26B-205ENST00000530402 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
VPS26B-205ENST00000530402 RNF40O75150 1001 aa12.25□□□□□ -0.45
VPS26B-205ENST00000530402 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
VPS26B-205ENST00000530402 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
VPS26B-205ENST00000530402 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
VPS26B-205ENST00000530402 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
VPS26B-205ENST00000530402 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
VPS26B-205ENST00000530402 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
VPS26B-205ENST00000530402 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
VPS26B-205ENST00000530402 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
VPS26B-205ENST00000530402 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
VPS26B-205ENST00000530402 SKIV2LQ15477 1246 aaKnown RBP12.22□□□□□ -0.45
VPS26B-205ENST00000530402 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
VPS26B-205ENST00000530402 MYSM1Q5VVJ2 828 aa12.2□□□□□ -0.46
VPS26B-205ENST00000530402 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
VPS26B-205ENST00000530402 HRO43593 1189 aa12.18□□□□□ -0.46
VPS26B-205ENST00000530402 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
VPS26B-205ENST00000530402 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
VPS26B-205ENST00000530402 KDM4AO75164 1064 aa12.17□□□□□ -0.46
VPS26B-205ENST00000530402 SLC10A3P09131 477 aa12.17□□□□□ -0.46
VPS26B-205ENST00000530402 GCGRP47871 477 aa12.16□□□□□ -0.46
VPS26B-205ENST00000530402 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
VPS26B-205ENST00000530402 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
VPS26B-205ENST00000530402 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
VPS26B-205ENST00000530402 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
VPS26B-205ENST00000530402 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
VPS26B-205ENST00000530402 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
VPS26B-205ENST00000530402 TIMELESSQ9UNS1 1208 aa12.14□□□□□ -0.47
VPS26B-205ENST00000530402 CFHP08603 1231 aa12.13□□□□□ -0.47
VPS26B-205ENST00000530402 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
VPS26B-205ENST00000530402 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
VPS26B-205ENST00000530402 USP46P62068 366 aa12.12□□□□□ -0.47
VPS26B-205ENST00000530402 KRTAP3-3Q9BYR6 98 aa12.12□□□□□ -0.47
VPS26B-205ENST00000530402 KRTAP3-2Q9BYR7 98 aa12.12□□□□□ -0.47
VPS26B-205ENST00000530402 NDUFV2P19404 249 aa12.11□□□□□ -0.47
VPS26B-205ENST00000530402 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
VPS26B-205ENST00000530402 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
VPS26B-205ENST00000530402 WNT2BQ93097 391 aa12.11□□□□□ -0.47
VPS26B-205ENST00000530402 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
VPS26B-205ENST00000530402 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
VPS26B-205ENST00000530402 POTEMA6NI47 508 aa12.09□□□□□ -0.47
VPS26B-205ENST00000530402 GRIPAP1Q4V328 841 aa12.09□□□□□ -0.47
VPS26B-205ENST00000530402 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-205ENST00000530402 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
VPS26B-205ENST00000530402 SPTLC1O15269 473 aa12.08□□□□□ -0.48
VPS26B-205ENST00000530402 BCAMP50895 628 aa12.08□□□□□ -0.48
VPS26B-205ENST00000530402 PPP4CP60510 307 aa12.08□□□□□ -0.48
VPS26B-205ENST00000530402 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
VPS26B-205ENST00000530402 HOXA2O43364 376 aa12.07□□□□□ -0.48
VPS26B-205ENST00000530402 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPS26B-205ENST00000530402 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
VPS26B-205ENST00000530402 FUT2Q10981 343 aa12.06□□□□□ -0.48
VPS26B-205ENST00000530402 FDX1P10109 184 aa12.05□□□□□ -0.48
VPS26B-205ENST00000530402 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-205ENST00000530402 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-205ENST00000530402 GJA5P36382 358 aa12.04□□□□□ -0.48
VPS26B-205ENST00000530402 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-205ENST00000530402 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
VPS26B-205ENST00000530402 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
VPS26B-205ENST00000530402 TSR3Q9UJK0 312 aaKnown RBP12.04□□□□□ -0.48
VPS26B-205ENST00000530402 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
VPS26B-205ENST00000530402 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
VPS26B-205ENST00000530402 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
VPS26B-205ENST00000530402 FLIIQ13045 1269 aa12.02□□□□□ -0.49
VPS26B-205ENST00000530402 TUSC1Q2TAM9 212 aa12.02□□□□□ -0.49
VPS26B-205ENST00000530402 HLA-CQ95604 372 aa12.02□□□□□ -0.49
VPS26B-205ENST00000530402 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
VPS26B-205ENST00000530402 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
VPS26B-205ENST00000530402 RFC5P40937 340 aa12□□□□□ -0.49
VPS26B-205ENST00000530402 QPCTQ16769 361 aa12□□□□□ -0.49
VPS26B-205ENST00000530402 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
VPS26B-205ENST00000530402 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
VPS26B-205ENST00000530402 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
VPS26B-205ENST00000530402 PRPF38BQ5VTL8 546 aaKnown RBP11.98□□□□□ -0.49
VPS26B-205ENST00000530402 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 LILRB3O75022 631 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 PCDHGC3Q9UN70 934 aa11.97□□□□□ -0.49
VPS26B-205ENST00000530402 HRCP23327 699 aa11.96□□□□□ -0.49
VPS26B-205ENST00000530402 APLP1P51693 650 aa11.96□□□□□ -0.49
VPS26B-205ENST00000530402 MTMR2Q13614 643 aa11.96□□□□□ -0.49
VPS26B-205ENST00000530402 TMEM259Q4ZIN3 620 aa11.96□□□□□ -0.49
VPS26B-205ENST00000530402 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms