RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 MSH6P52701 1360 aa11.68□□□□□ -0.54
NUP98-217ENST00000530345 TMEM131LA2VDJ0 1609 aa11.68□□□□□ -0.54
NUP98-217ENST00000530345 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
NUP98-217ENST00000530345 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
NUP98-217ENST00000530345 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
NUP98-217ENST00000530345 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
NUP98-217ENST00000530345 IDI1Q13907 227 aa11.66□□□□□ -0.54
NUP98-217ENST00000530345 COL16A1Q07092 1604 aaPredicted RBP11.66□□□□□ -0.54
NUP98-217ENST00000530345 ZFYVE9O95405 1425 aa11.66□□□□□ -0.54
NUP98-217ENST00000530345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP98-217ENST00000530345 JCADQ9P266 1359 aa11.65□□□□□ -0.55
NUP98-217ENST00000530345 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
NUP98-217ENST00000530345 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
NUP98-217ENST00000530345 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
NUP98-217ENST00000530345 PROSER2Q86WR7 435 aaPredicted RBP11.64□□□□□ -0.55
NUP98-217ENST00000530345 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
NUP98-217ENST00000530345 E9PCH4 1651 aa11.64□□□□□ -0.55
NUP98-217ENST00000530345 PIK3R4Q99570 1358 aa11.64□□□□□ -0.55
NUP98-217ENST00000530345 ANKRD50Q9ULJ7 1429 aa11.63□□□□□ -0.55
NUP98-217ENST00000530345 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
NUP98-217ENST00000530345 TRPM2O94759 1503 aa11.61□□□□□ -0.55
NUP98-217ENST00000530345 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
NUP98-217ENST00000530345 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
NUP98-217ENST00000530345 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
NUP98-217ENST00000530345 SLAIN2Q9P270 581 aa11.6□□□□□ -0.55
NUP98-217ENST00000530345 SPHKAPQ2M3C7 1700 aa11.6□□□□□ -0.55
NUP98-217ENST00000530345 DCCP43146 1447 aa11.6□□□□□ -0.55
NUP98-217ENST00000530345 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
NUP98-217ENST00000530345 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
NUP98-217ENST00000530345 XRN1Q8IZH2 1706 aaKnown RBP11.58□□□□□ -0.56
NUP98-217ENST00000530345 NHSL1Q5SYE7 1610 aa11.58□□□□□ -0.56
NUP98-217ENST00000530345 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 BCANQ96GW7 911 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
NUP98-217ENST00000530345 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
NUP98-217ENST00000530345 KIF1BO60333 1816 aa11.56□□□□□ -0.56
NUP98-217ENST00000530345 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
NUP98-217ENST00000530345 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
NUP98-217ENST00000530345 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
NUP98-217ENST00000530345 NRXN3Q9Y4C0 1643 aa11.54□□□□□ -0.56
NUP98-217ENST00000530345 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
NUP98-217ENST00000530345 ATF3P18847 181 aa11.53□□□□□ -0.56
NUP98-217ENST00000530345 LRP6O75581 1613 aa11.53□□□□□ -0.56
NUP98-217ENST00000530345 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
NUP98-217ENST00000530345 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
NUP98-217ENST00000530345 LAMC1P11047 1609 aa11.52□□□□□ -0.57
NUP98-217ENST00000530345 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
NUP98-217ENST00000530345 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
NUP98-217ENST00000530345 NALCNQ8IZF0 1738 aa11.5□□□□□ -0.57
NUP98-217ENST00000530345 SETD5Q9C0A6 1442 aa11.5□□□□□ -0.57
NUP98-217ENST00000530345 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
NUP98-217ENST00000530345 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
NUP98-217ENST00000530345 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
NUP98-217ENST00000530345 MARF1Q9Y4F3 1742 aaKnown RBP11.46□□□□□ -0.57
NUP98-217ENST00000530345 MST1RQ04912 1400 aa11.46□□□□□ -0.57
NUP98-217ENST00000530345 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 PRAG1Q86YV5 1406 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 NUP155O75694 1391 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 BRINP3Q76B58 766 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
NUP98-217ENST00000530345 EP400Q96L91 3159 aa11.44□□□□□ -0.58
NUP98-217ENST00000530345 RXRBP28702 533 aa11.44□□□□□ -0.58
NUP98-217ENST00000530345 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP98-217ENST00000530345 PPLO60437 1756 aa11.44□□□□□ -0.58
NUP98-217ENST00000530345 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
NUP98-217ENST00000530345 SRCAPQ6ZRS2 3230 aa11.43□□□□□ -0.58
NUP98-217ENST00000530345 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
NUP98-217ENST00000530345 LRRC59Q96AG4 307 aaKnown RBP11.43□□□□□ -0.58
NUP98-217ENST00000530345 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.4□□□□□ -0.58
NUP98-217ENST00000530345 AFF2P51816 1311 aa11.4□□□□□ -0.58
NUP98-217ENST00000530345 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
NUP98-217ENST00000530345 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.59
NUP98-217ENST00000530345 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
NUP98-217ENST00000530345 FOXD1Q16676 465 aa11.39□□□□□ -0.59
NUP98-217ENST00000530345 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
NUP98-217ENST00000530345 CDC42BPGQ6DT37 1551 aa11.39□□□□□ -0.59
NUP98-217ENST00000530345 RGS12O14924 1447 aa11.38□□□□□ -0.59
NUP98-217ENST00000530345 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
NUP98-217ENST00000530345 METP08581 1390 aa11.38□□□□□ -0.59
NUP98-217ENST00000530345 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
NUP98-217ENST00000530345 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
NUP98-217ENST00000530345 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
NUP98-217ENST00000530345 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
NUP98-217ENST00000530345 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
NUP98-217ENST00000530345 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
NUP98-217ENST00000530345 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
NUP98-217ENST00000530345 ATAD2Q6PL18 1390 aa11.37□□□□□ -0.59
NUP98-217ENST00000530345 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
NUP98-217ENST00000530345 KIF1AQ12756 1690 aa11.35□□□□□ -0.59
NUP98-217ENST00000530345 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
NUP98-217ENST00000530345 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
NUP98-217ENST00000530345 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
NUP98-217ENST00000530345 C8orf37Q96NL8 207 aa11.34□□□□□ -0.59
NUP98-217ENST00000530345 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
NUP98-217ENST00000530345 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms