RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 DCAF8Q5TAQ9 597 aa18.95■□□□□ 0.62
PCDHA4-203ENST00000530339 TAF7LQ5H9L4 462 aa18.95■□□□□ 0.62
PCDHA4-203ENST00000530339 MRE11P49959 708 aa18.95■□□□□ 0.62
PCDHA4-203ENST00000530339 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
PCDHA4-203ENST00000530339 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
PCDHA4-203ENST00000530339 RUNDC1Q96C34 613 aa18.94■□□□□ 0.62
PCDHA4-203ENST00000530339 ELL2O00472 640 aaPredicted RBP18.93■□□□□ 0.62
PCDHA4-203ENST00000530339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.93■□□□□ 0.62
PCDHA4-203ENST00000530339 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
PCDHA4-203ENST00000530339 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
PCDHA4-203ENST00000530339 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
PCDHA4-203ENST00000530339 CLSTN1O94985 981 aa18.92■□□□□ 0.62
PCDHA4-203ENST00000530339 NUCB2P80303 420 aa18.92■□□□□ 0.62
PCDHA4-203ENST00000530339 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
PCDHA4-203ENST00000530339 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
PCDHA4-203ENST00000530339 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
PCDHA4-203ENST00000530339 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
PCDHA4-203ENST00000530339 GOLGA6L1Q8N7Z2 621 aa18.91■□□□□ 0.62
PCDHA4-203ENST00000530339 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
PCDHA4-203ENST00000530339 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
PCDHA4-203ENST00000530339 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
PCDHA4-203ENST00000530339 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
PCDHA4-203ENST00000530339 GOLGA6L19H0YKK7 550 aa18.89■□□□□ 0.61
PCDHA4-203ENST00000530339 FOXD4L6Q3SYB3 417 aaPredicted RBP18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 FOXD4L3Q6VB84 417 aaPredicted RBP18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 CFTRP13569 1480 aa18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 BRPF3Q9ULD4 1205 aa18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 SF3A1Q15459 793 aaKnown RBP18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 BACH2Q9BYV9 841 aa18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
PCDHA4-203ENST00000530339 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
PCDHA4-203ENST00000530339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 BECN2A8MW95 431 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 FRAT2O75474 233 aaPredicted RBP18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 GNAI1P63096 354 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
PCDHA4-203ENST00000530339 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
PCDHA4-203ENST00000530339 H3BQV1 296 aa18.85■□□□□ 0.61
PCDHA4-203ENST00000530339 IFFO2Q5TF58 517 aa18.85■□□□□ 0.61
PCDHA4-203ENST00000530339 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
PCDHA4-203ENST00000530339 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
PCDHA4-203ENST00000530339 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 TRAK2O60296 914 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 LNPKQ9C0E8 428 aa18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
PCDHA4-203ENST00000530339 ARAP1Q96P48 1450 aa18.83■□□□□ 0.61
PCDHA4-203ENST00000530339 RIPK4P57078 832 aa18.83■□□□□ 0.6
PCDHA4-203ENST00000530339 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
PCDHA4-203ENST00000530339 HSP90AB4PQ58FF6 505 aa18.83■□□□□ 0.6
PCDHA4-203ENST00000530339 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 TEFQ10587 303 aa18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 MCTP1Q6DN14 999 aa18.82■□□□□ 0.6
PCDHA4-203ENST00000530339 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
PCDHA4-203ENST00000530339 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
PCDHA4-203ENST00000530339 TPM3P06753 285 aa18.81■□□□□ 0.6
PCDHA4-203ENST00000530339 DIAPH3Q9NSV4 1193 aa18.81■□□□□ 0.6
PCDHA4-203ENST00000530339 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
PCDHA4-203ENST00000530339 ZKSCAN1P17029 563 aaPredicted RBP18.8■□□□□ 0.6
PCDHA4-203ENST00000530339 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
PCDHA4-203ENST00000530339 ZNF771Q7L3S4 317 aaPredicted RBP18.8■□□□□ 0.6
PCDHA4-203ENST00000530339 MTERF4Q7Z6M4 381 aaKnown RBP18.8■□□□□ 0.6
PCDHA4-203ENST00000530339 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
PCDHA4-203ENST00000530339 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
PCDHA4-203ENST00000530339 EVA1CP58658 441 aa18.79■□□□□ 0.6
PCDHA4-203ENST00000530339 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
PCDHA4-203ENST00000530339 HECW1Q76N89 1606 aa18.79■□□□□ 0.6
PCDHA4-203ENST00000530339 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 PDE3AQ14432 1141 aa18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 NOC3LQ8WTT2 800 aaKnown RBP18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 ANO2Q9NQ90 1003 aa18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 KIAA1107Q9UPP5 1409 aa18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
PCDHA4-203ENST00000530339 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
PCDHA4-203ENST00000530339 CDC45O75419 566 aa18.77■□□□□ 0.6
PCDHA4-203ENST00000530339 RNF20Q5VTR2 975 aa18.77■□□□□ 0.6
PCDHA4-203ENST00000530339 TIAM1Q13009 1591 aa18.77■□□□□ 0.59
PCDHA4-203ENST00000530339 ZNF592Q92610 1267 aa18.77■□□□□ 0.59
PCDHA4-203ENST00000530339 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.59
PCDHA4-203ENST00000530339 TPM2P07951 284 aa18.76■□□□□ 0.59
PCDHA4-203ENST00000530339 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
PCDHA4-203ENST00000530339 CCDC39Q9UFE4 941 aa18.76■□□□□ 0.59
PCDHA4-203ENST00000530339 R3HCC1Q9Y3T6 440 aaKnown RBP18.76■□□□□ 0.59
PCDHA4-203ENST00000530339 MEX3CQ5U5Q3 659 aaKnown RBP18.75■□□□□ 0.59
PCDHA4-203ENST00000530339 GPS2Q13227 327 aa18.74■□□□□ 0.59
PCDHA4-203ENST00000530339 RASSF8Q8NHQ8 419 aa18.74■□□□□ 0.59
PCDHA4-203ENST00000530339 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
PCDHA4-203ENST00000530339 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
PCDHA4-203ENST00000530339 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms