RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
CASP4-208ENST00000530309 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
CASP4-208ENST00000530309 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
CASP4-208ENST00000530309 CD46P15529 392 aa12.35□□□□□ -0.43
CASP4-208ENST00000530309 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
CASP4-208ENST00000530309 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
CASP4-208ENST00000530309 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASP4-208ENST00000530309 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
CASP4-208ENST00000530309 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
CASP4-208ENST00000530309 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
CASP4-208ENST00000530309 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
CASP4-208ENST00000530309 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
CASP4-208ENST00000530309 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
CASP4-208ENST00000530309 SKIV2LQ15477 1246 aaKnown RBP12.31□□□□□ -0.44
CASP4-208ENST00000530309 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
CASP4-208ENST00000530309 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
CASP4-208ENST00000530309 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
CASP4-208ENST00000530309 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
CASP4-208ENST00000530309 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
CASP4-208ENST00000530309 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
CASP4-208ENST00000530309 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
CASP4-208ENST00000530309 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
CASP4-208ENST00000530309 SPIRE2Q8WWL2 714 aa12.27□□□□□ -0.45
CASP4-208ENST00000530309 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.45
CASP4-208ENST00000530309 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
CASP4-208ENST00000530309 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
CASP4-208ENST00000530309 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
CASP4-208ENST00000530309 C14orf37Q86TY3 774 aa12.25□□□□□ -0.45
CASP4-208ENST00000530309 HRO43593 1189 aa12.24□□□□□ -0.45
CASP4-208ENST00000530309 SLC10A3P09131 477 aa12.24□□□□□ -0.45
CASP4-208ENST00000530309 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
CASP4-208ENST00000530309 SLF2Q8IX21 1173 aa12.24□□□□□ -0.45
CASP4-208ENST00000530309 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
CASP4-208ENST00000530309 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
CASP4-208ENST00000530309 GCGRP47871 477 aa12.23□□□□□ -0.45
CASP4-208ENST00000530309 CLK2P49760 499 aaKnown RBP12.23□□□□□ -0.45
CASP4-208ENST00000530309 KDM4AO75164 1064 aa12.22□□□□□ -0.45
CASP4-208ENST00000530309 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
CASP4-208ENST00000530309 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
CASP4-208ENST00000530309 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
CASP4-208ENST00000530309 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
CASP4-208ENST00000530309 SPTLC1O15269 473 aa12.19□□□□□ -0.46
CASP4-208ENST00000530309 USP46P62068 366 aa12.19□□□□□ -0.46
CASP4-208ENST00000530309 MOXD2PA6NHM9 499 aa12.18□□□□□ -0.46
CASP4-208ENST00000530309 LIMD1Q9UGP4 676 aa12.18□□□□□ -0.46
CASP4-208ENST00000530309 RNF40O75150 1001 aa12.17□□□□□ -0.46
CASP4-208ENST00000530309 GJA5P36382 358 aa12.17□□□□□ -0.46
CASP4-208ENST00000530309 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
CASP4-208ENST00000530309 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
CASP4-208ENST00000530309 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
CASP4-208ENST00000530309 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
CASP4-208ENST00000530309 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
CASP4-208ENST00000530309 NDUFV2P19404 249 aa12.15□□□□□ -0.46
CASP4-208ENST00000530309 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
CASP4-208ENST00000530309 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
CASP4-208ENST00000530309 HOXA2O43364 376 aa12.14□□□□□ -0.47
CASP4-208ENST00000530309 CFHP08603 1231 aa12.14□□□□□ -0.47
CASP4-208ENST00000530309 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
CASP4-208ENST00000530309 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
CASP4-208ENST00000530309 FLIIQ13045 1269 aa12.13□□□□□ -0.47
CASP4-208ENST00000530309 CSPP1Q1MSJ5 1256 aa12.11□□□□□ -0.47
CASP4-208ENST00000530309 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
CASP4-208ENST00000530309 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
CASP4-208ENST00000530309 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 FDX1P10109 184 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 FUT2Q10981 343 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
CASP4-208ENST00000530309 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
CASP4-208ENST00000530309 WNT2BQ93097 391 aa12.09□□□□□ -0.47
CASP4-208ENST00000530309 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
CASP4-208ENST00000530309 RFC5P40937 340 aa12.08□□□□□ -0.48
CASP4-208ENST00000530309 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
CASP4-208ENST00000530309 LILRB3O75022 631 aa12.07□□□□□ -0.48
CASP4-208ENST00000530309 PPP4CP60510 307 aa12.07□□□□□ -0.48
CASP4-208ENST00000530309 QPCTQ16769 361 aa12.07□□□□□ -0.48
CASP4-208ENST00000530309 PRPF38BQ5VTL8 546 aaKnown RBP12.07□□□□□ -0.48
CASP4-208ENST00000530309 HLA-CQ95604 372 aa12.07□□□□□ -0.48
CASP4-208ENST00000530309 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
CASP4-208ENST00000530309 BCAMP50895 628 aa12.06□□□□□ -0.48
CASP4-208ENST00000530309 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
CASP4-208ENST00000530309 PRR14Q9BWN1 585 aa12.06□□□□□ -0.48
CASP4-208ENST00000530309 HPS5Q9UPZ3 1129 aa12.06□□□□□ -0.48
CASP4-208ENST00000530309 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
CASP4-208ENST00000530309 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
CASP4-208ENST00000530309 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
CASP4-208ENST00000530309 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
CASP4-208ENST00000530309 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
CASP4-208ENST00000530309 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
CASP4-208ENST00000530309 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
CASP4-208ENST00000530309 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
CASP4-208ENST00000530309 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
CASP4-208ENST00000530309 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
CASP4-208ENST00000530309 HRCP23327 699 aa12.03□□□□□ -0.48
CASP4-208ENST00000530309 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
CASP4-208ENST00000530309 MCM6Q14566 821 aa12.02□□□□□ -0.49
CASP4-208ENST00000530309 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.49
CASP4-208ENST00000530309 ZMYND15Q9H091 742 aa12.02□□□□□ -0.49
CASP4-208ENST00000530309 MTMR2Q13614 643 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms