RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
CAPRIN1-208ENST00000530008 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
CAPRIN1-208ENST00000530008 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
CAPRIN1-208ENST00000530008 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
CAPRIN1-208ENST00000530008 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
CAPRIN1-208ENST00000530008 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 DDX11L8A8MPP1 907 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 DNAJB2P25686 324 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 CSPP1Q1MSJ5 1256 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
CAPRIN1-208ENST00000530008 GJA5P36382 358 aa11.42□□□□□ -0.58
CAPRIN1-208ENST00000530008 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
CAPRIN1-208ENST00000530008 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
CAPRIN1-208ENST00000530008 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
CAPRIN1-208ENST00000530008 LHX6Q9UPM6 363 aa11.42□□□□□ -0.58
CAPRIN1-208ENST00000530008 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
CAPRIN1-208ENST00000530008 SOCS7O14512 581 aa11.41□□□□□ -0.58
CAPRIN1-208ENST00000530008 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
CAPRIN1-208ENST00000530008 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
CAPRIN1-208ENST00000530008 NBPF26B4DH59 902 aa11.4□□□□□ -0.58
CAPRIN1-208ENST00000530008 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
CAPRIN1-208ENST00000530008 LILRB3O75022 631 aa11.4□□□□□ -0.58
CAPRIN1-208ENST00000530008 NDUFV2P19404 249 aa11.4□□□□□ -0.58
CAPRIN1-208ENST00000530008 QPCTQ16769 361 aa11.4□□□□□ -0.58
CAPRIN1-208ENST00000530008 TMEM134Q9H6X4 195 aa11.39□□□□□ -0.59
CAPRIN1-208ENST00000530008 PRM3Q9NNZ6 103 aa11.39□□□□□ -0.59
CAPRIN1-208ENST00000530008 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
CAPRIN1-208ENST00000530008 PSDA5PKW4 1024 aaPredicted RBP11.38□□□□□ -0.59
CAPRIN1-208ENST00000530008 AP1G2O75843 785 aa11.38□□□□□ -0.59
CAPRIN1-208ENST00000530008 ABL2P42684 1182 aa11.38□□□□□ -0.59
CAPRIN1-208ENST00000530008 TATDN2Q93075 761 aa11.38□□□□□ -0.59
CAPRIN1-208ENST00000530008 PCDHB15Q9Y5E8 787 aa11.38□□□□□ -0.59
CAPRIN1-208ENST00000530008 PTPREP23469 700 aa11.37□□□□□ -0.59
CAPRIN1-208ENST00000530008 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-208ENST00000530008 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
CAPRIN1-208ENST00000530008 ZNF710Q8N1W2 664 aa11.36□□□□□ -0.59
CAPRIN1-208ENST00000530008 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-208ENST00000530008 NPM2Q86SE8 214 aaKnown RBP11.35□□□□□ -0.59
CAPRIN1-208ENST00000530008 PACS2Q86VP3 889 aa11.35□□□□□ -0.59
CAPRIN1-208ENST00000530008 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
CAPRIN1-208ENST00000530008 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 PRPF38BQ5VTL8 546 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-208ENST00000530008 KDM4AO75164 1064 aa11.33□□□□□ -0.6
CAPRIN1-208ENST00000530008 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
CAPRIN1-208ENST00000530008 RETREG2Q8NC44 543 aa11.33□□□□□ -0.6
CAPRIN1-208ENST00000530008 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-208ENST00000530008 POM121CA8CG34 1229 aa11.32□□□□□ -0.6
CAPRIN1-208ENST00000530008 GLMNQ92990 594 aa11.32□□□□□ -0.6
CAPRIN1-208ENST00000530008 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
CAPRIN1-208ENST00000530008 SMAPO00193 183 aa11.3□□□□□ -0.6
CAPRIN1-208ENST00000530008 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-208ENST00000530008 USP46P62068 366 aa11.3□□□□□ -0.6
CAPRIN1-208ENST00000530008 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
CAPRIN1-208ENST00000530008 GCGRP47871 477 aa11.29□□□□□ -0.6
CAPRIN1-208ENST00000530008 HOXA2O43364 376 aa11.28□□□□□ -0.6
CAPRIN1-208ENST00000530008 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
CAPRIN1-208ENST00000530008 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-208ENST00000530008 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
CAPRIN1-208ENST00000530008 FDX1P10109 184 aa11.27□□□□□ -0.61
CAPRIN1-208ENST00000530008 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
CAPRIN1-208ENST00000530008 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
CAPRIN1-208ENST00000530008 IRF5Q13568 498 aa11.25□□□□□ -0.61
CAPRIN1-208ENST00000530008 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
CAPRIN1-208ENST00000530008 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-208ENST00000530008 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
CAPRIN1-208ENST00000530008 SLC10A3P09131 477 aa11.22□□□□□ -0.61
CAPRIN1-208ENST00000530008 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
CAPRIN1-208ENST00000530008 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
CAPRIN1-208ENST00000530008 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
CAPRIN1-208ENST00000530008 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
CAPRIN1-208ENST00000530008 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
CAPRIN1-208ENST00000530008 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
CAPRIN1-208ENST00000530008 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
CAPRIN1-208ENST00000530008 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 SWT1Q5T5J6 900 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 HLA-CQ95604 372 aa11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
CAPRIN1-208ENST00000530008 GPR37L1O60883 481 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 PDE4CQ08493 712 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 MTMR2Q13614 643 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
CAPRIN1-208ENST00000530008 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
CAPRIN1-208ENST00000530008 HELBQ8NG08 1087 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-208ENST00000530008 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
CAPRIN1-208ENST00000530008 CFAP99D6REC4 459 aa11.15□□□□□ -0.62
CAPRIN1-208ENST00000530008 SNPHO15079 494 aa11.15□□□□□ -0.62
CAPRIN1-208ENST00000530008 VAC14Q08AM6 782 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms