RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
SF3B2-208ENST00000529994 ANKRD30AQ9BXX3 1397 aa17.75■□□□□ 0.43
SF3B2-208ENST00000529994 NOS1P29475 1434 aa17.74■□□□□ 0.43
SF3B2-208ENST00000529994 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
SF3B2-208ENST00000529994 JCADQ9P266 1359 aa17.72■□□□□ 0.43
SF3B2-208ENST00000529994 APLP2Q06481 763 aa17.72■□□□□ 0.43
SF3B2-208ENST00000529994 CHD2O14647 1828 aaKnown RBP17.72■□□□□ 0.43
SF3B2-208ENST00000529994 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
SF3B2-208ENST00000529994 SLC52A1Q9NWF4 448 aa17.71■□□□□ 0.43
SF3B2-208ENST00000529994 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
SF3B2-208ENST00000529994 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
SF3B2-208ENST00000529994 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
SF3B2-208ENST00000529994 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
SF3B2-208ENST00000529994 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
SF3B2-208ENST00000529994 PLEKHG1Q9ULL1 1385 aa17.67■□□□□ 0.42
SF3B2-208ENST00000529994 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
SF3B2-208ENST00000529994 LRP6O75581 1613 aa17.66■□□□□ 0.42
SF3B2-208ENST00000529994 CHGAP10645 457 aaKnown RBP17.66■□□□□ 0.42
SF3B2-208ENST00000529994 NUTM2DQ5VT03 806 aaPredicted RBP17.66■□□□□ 0.42
SF3B2-208ENST00000529994 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
SF3B2-208ENST00000529994 TMEM131LA2VDJ0 1609 aa17.65■□□□□ 0.42
SF3B2-208ENST00000529994 RPRD2Q5VT52 1461 aaKnown RBP17.63■□□□□ 0.41
SF3B2-208ENST00000529994 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
SF3B2-208ENST00000529994 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
SF3B2-208ENST00000529994 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.63■□□□□ 0.41
SF3B2-208ENST00000529994 TBX22Q9Y458 520 aa17.62■□□□□ 0.41
SF3B2-208ENST00000529994 SPATA31A6Q5VVP1 1343 aa17.62■□□□□ 0.41
SF3B2-208ENST00000529994 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
SF3B2-208ENST00000529994 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
SF3B2-208ENST00000529994 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
SF3B2-208ENST00000529994 ATF3P18847 181 aa17.6■□□□□ 0.41
SF3B2-208ENST00000529994 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
SF3B2-208ENST00000529994 ADAMTS13Q76LX8 1427 aa17.59■□□□□ 0.41
SF3B2-208ENST00000529994 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
SF3B2-208ENST00000529994 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
SF3B2-208ENST00000529994 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
SF3B2-208ENST00000529994 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
SF3B2-208ENST00000529994 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
SF3B2-208ENST00000529994 AHDC1Q5TGY3 1603 aaPredicted RBP17.58■□□□□ 0.41
SF3B2-208ENST00000529994 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.41
SF3B2-208ENST00000529994 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.58■□□□□ 0.4
SF3B2-208ENST00000529994 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.4
SF3B2-208ENST00000529994 E9PCH4 1651 aa17.57■□□□□ 0.4
SF3B2-208ENST00000529994 RXRBP28702 533 aa17.55■□□□□ 0.4
SF3B2-208ENST00000529994 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
SF3B2-208ENST00000529994 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
SF3B2-208ENST00000529994 UNC13BO14795 1591 aa17.53■□□□□ 0.4
SF3B2-208ENST00000529994 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
SF3B2-208ENST00000529994 PTPRUQ92729 1446 aa17.53■□□□□ 0.4
SF3B2-208ENST00000529994 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
SF3B2-208ENST00000529994 TRPM2O94759 1503 aa17.52■□□□□ 0.39
SF3B2-208ENST00000529994 AFF2P51816 1311 aa17.5■□□□□ 0.39
SF3B2-208ENST00000529994 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
SF3B2-208ENST00000529994 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
SF3B2-208ENST00000529994 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
SF3B2-208ENST00000529994 NRXN3Q9Y4C0 1643 aa17.46■□□□□ 0.39
SF3B2-208ENST00000529994 XRN1Q8IZH2 1706 aaKnown RBP17.45■□□□□ 0.38
SF3B2-208ENST00000529994 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
SF3B2-208ENST00000529994 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
SF3B2-208ENST00000529994 DCCP43146 1447 aa17.45■□□□□ 0.38
SF3B2-208ENST00000529994 MST1RQ04912 1400 aa17.45■□□□□ 0.38
SF3B2-208ENST00000529994 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
SF3B2-208ENST00000529994 NUP155O75694 1391 aa17.44■□□□□ 0.38
SF3B2-208ENST00000529994 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
SF3B2-208ENST00000529994 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
SF3B2-208ENST00000529994 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
SF3B2-208ENST00000529994 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
SF3B2-208ENST00000529994 METP08581 1390 aa17.41■□□□□ 0.38
SF3B2-208ENST00000529994 RGS12O14924 1447 aa17.41■□□□□ 0.38
SF3B2-208ENST00000529994 ITGAEP38570 1179 aa17.41■□□□□ 0.38
SF3B2-208ENST00000529994 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
SF3B2-208ENST00000529994 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
SF3B2-208ENST00000529994 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
SF3B2-208ENST00000529994 SPHKAPQ2M3C7 1700 aa17.39■□□□□ 0.37
SF3B2-208ENST00000529994 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
SF3B2-208ENST00000529994 ADAMTS2O95450 1211 aa17.39■□□□□ 0.37
SF3B2-208ENST00000529994 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
SF3B2-208ENST00000529994 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
SF3B2-208ENST00000529994 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
SF3B2-208ENST00000529994 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
SF3B2-208ENST00000529994 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
SF3B2-208ENST00000529994 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
SF3B2-208ENST00000529994 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
SF3B2-208ENST00000529994 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
SF3B2-208ENST00000529994 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
SF3B2-208ENST00000529994 USP21Q9UK80 565 aa17.3■□□□□ 0.36
SF3B2-208ENST00000529994 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
SF3B2-208ENST00000529994 KIF1BO60333 1816 aa17.28■□□□□ 0.36
SF3B2-208ENST00000529994 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
SF3B2-208ENST00000529994 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.36
SF3B2-208ENST00000529994 LAMC1P11047 1609 aa17.27■□□□□ 0.36
SF3B2-208ENST00000529994 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
SF3B2-208ENST00000529994 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
SF3B2-208ENST00000529994 EP400Q96L91 3159 aa17.24■□□□□ 0.35
SF3B2-208ENST00000529994 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
SF3B2-208ENST00000529994 ATRNO75882 1429 aa17.22■□□□□ 0.35
SF3B2-208ENST00000529994 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
SF3B2-208ENST00000529994 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
SF3B2-208ENST00000529994 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
SF3B2-208ENST00000529994 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms