RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
AMBRA1-209ENST00000529963 IL27Q8NEV9 243 aa9.91□□□□□ -0.82
AMBRA1-209ENST00000529963 GPCPD1Q9NPB8 672 aa9.91□□□□□ -0.82
AMBRA1-209ENST00000529963 MS4A1P11836 297 aa9.9□□□□□ -0.82
AMBRA1-209ENST00000529963 CLCN1P35523 988 aa9.9□□□□□ -0.82
AMBRA1-209ENST00000529963 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
AMBRA1-209ENST00000529963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-209ENST00000529963 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-209ENST00000529963 FAM117AQ9C073 453 aa9.89□□□□□ -0.83
AMBRA1-209ENST00000529963 TK2O00142 265 aa9.88□□□□□ -0.83
AMBRA1-209ENST00000529963 DNAJB2P25686 324 aa9.88□□□□□ -0.83
AMBRA1-209ENST00000529963 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
AMBRA1-209ENST00000529963 SSTR3P32745 418 aaPredicted RBP9.87□□□□□ -0.83
AMBRA1-209ENST00000529963 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
AMBRA1-209ENST00000529963 NBPF3Q9H094 633 aa9.87□□□□□ -0.83
AMBRA1-209ENST00000529963 TMEM134Q9H6X4 195 aa9.87□□□□□ -0.83
AMBRA1-209ENST00000529963 ERCC6Q03468 1493 aa9.86□□□□□ -0.83
AMBRA1-209ENST00000529963 HRO43593 1189 aa9.86□□□□□ -0.83
AMBRA1-209ENST00000529963 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
AMBRA1-209ENST00000529963 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
AMBRA1-209ENST00000529963 FAM217BQ9NTX9 383 aaPredicted RBP9.86□□□□□ -0.83
AMBRA1-209ENST00000529963 DAXXQ9UER7 740 aaPredicted RBP9.85□□□□□ -0.83
AMBRA1-209ENST00000529963 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
AMBRA1-209ENST00000529963 SAMD7Q7Z3H4 446 aa9.83□□□□□ -0.84
AMBRA1-209ENST00000529963 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 ZFRQ96KR1 1074 aaKnown RBP9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 RNF40O75150 1001 aa9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 LAPTM4BQ86VI4 370 aa9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
AMBRA1-209ENST00000529963 RDH13Q8NBN7 331 aa9.8□□□□□ -0.84
AMBRA1-209ENST00000529963 GOLGA8CPA6NN73 597 aa9.79□□□□□ -0.84
AMBRA1-209ENST00000529963 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
AMBRA1-209ENST00000529963 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
AMBRA1-209ENST00000529963 DDRGK1Q96HY6 314 aa9.78□□□□□ -0.84
AMBRA1-209ENST00000529963 SLC10A3P09131 477 aa9.77□□□□□ -0.84
AMBRA1-209ENST00000529963 CD46P15529 392 aa9.77□□□□□ -0.85
AMBRA1-209ENST00000529963 BCAMP50895 628 aa9.77□□□□□ -0.85
AMBRA1-209ENST00000529963 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
AMBRA1-209ENST00000529963 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
AMBRA1-209ENST00000529963 WNT2BQ93097 391 aa9.75□□□□□ -0.85
AMBRA1-209ENST00000529963 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
AMBRA1-209ENST00000529963 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-209ENST00000529963 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
AMBRA1-209ENST00000529963 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
AMBRA1-209ENST00000529963 KCTD12Q96CX2 325 aaKnown RBP9.72□□□□□ -0.85
AMBRA1-209ENST00000529963 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
AMBRA1-209ENST00000529963 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
AMBRA1-209ENST00000529963 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.85
AMBRA1-209ENST00000529963 SOWAHBA6NEL2 793 aa9.71□□□□□ -0.86
AMBRA1-209ENST00000529963 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 CFHP08603 1231 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 GCGRP47871 477 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 HPS5Q9UPZ3 1129 aa9.7□□□□□ -0.86
AMBRA1-209ENST00000529963 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
AMBRA1-209ENST00000529963 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
AMBRA1-209ENST00000529963 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
AMBRA1-209ENST00000529963 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-209ENST00000529963 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
AMBRA1-209ENST00000529963 SMARCA4P51532 1647 aa9.68□□□□□ -0.86
AMBRA1-209ENST00000529963 KDM4AO75164 1064 aa9.67□□□□□ -0.86
AMBRA1-209ENST00000529963 NDUFV2P19404 249 aa9.67□□□□□ -0.86
AMBRA1-209ENST00000529963 PPP4CP60510 307 aa9.67□□□□□ -0.86
AMBRA1-209ENST00000529963 HLA-CQ95604 372 aa9.67□□□□□ -0.86
AMBRA1-209ENST00000529963 PROCA1Q8NCQ7 364 aaPredicted RBP9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 FUT2Q10981 343 aa9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 SH3D19Q5HYK7 790 aa9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 TSR3Q9UJK0 312 aaKnown RBP9.66□□□□□ -0.86
AMBRA1-209ENST00000529963 PTPN5P54829 565 aa9.65□□□□□ -0.86
AMBRA1-209ENST00000529963 GUCA2AQ02747 115 aa9.65□□□□□ -0.86
AMBRA1-209ENST00000529963 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
AMBRA1-209ENST00000529963 BAZ1AQ9NRL2 1556 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-209ENST00000529963 APLP1P51693 650 aa9.64□□□□□ -0.87
AMBRA1-209ENST00000529963 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
AMBRA1-209ENST00000529963 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
AMBRA1-209ENST00000529963 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
AMBRA1-209ENST00000529963 BAZ1BQ9UIG0 1483 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-209ENST00000529963 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-209ENST00000529963 PUS10Q3MIT2 529 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-209ENST00000529963 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
AMBRA1-209ENST00000529963 HOXA2O43364 376 aa9.62□□□□□ -0.87
AMBRA1-209ENST00000529963 CLK2P49760 499 aaKnown RBP9.62□□□□□ -0.87
AMBRA1-209ENST00000529963 SPNS2Q8IVW8 549 aa9.62□□□□□ -0.87
AMBRA1-209ENST00000529963 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-209ENST00000529963 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
AMBRA1-209ENST00000529963 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
AMBRA1-209ENST00000529963 FBXO31Q5XUX0 539 aaPredicted RBP9.61□□□□□ -0.87
AMBRA1-209ENST00000529963 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
AMBRA1-209ENST00000529963 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
AMBRA1-209ENST00000529963 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
AMBRA1-209ENST00000529963 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
AMBRA1-209ENST00000529963 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
AMBRA1-209ENST00000529963 NESP48681 1621 aa9.59□□□□□ -0.87
AMBRA1-209ENST00000529963 PEG3Q9GZU2 1588 aa9.59□□□□□ -0.87
AMBRA1-209ENST00000529963 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms