RNA–Protein interactions for RNA: ENST00000529939.5

MVB12A-211, Transcript of multivesicular body subunit 12A, humanhuman

TSL 3 BASIC

Gene MVB12A, Length 1,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-211ENST00000529939 ZFYVE9O95405 1425 aa25.97■■□□□ 1.75
MVB12A-211ENST00000529939 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
MVB12A-211ENST00000529939 FAM50AQ14320 339 aaKnown RBP25.95■■□□□ 1.74
MVB12A-211ENST00000529939 RBM33Q96EV2 1170 aaKnown RBP25.95■■□□□ 1.74
MVB12A-211ENST00000529939 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.74
MVB12A-211ENST00000529939 MSH6P52701 1360 aa25.92■■□□□ 1.74
MVB12A-211ENST00000529939 TMEM131LA2VDJ0 1609 aa25.92■■□□□ 1.74
MVB12A-211ENST00000529939 BCANQ96GW7 911 aa25.91■■□□□ 1.74
MVB12A-211ENST00000529939 GCC2Q8IWJ2 1684 aa25.9■■□□□ 1.74
MVB12A-211ENST00000529939 RIMS2Q9UQ26 1411 aa25.9■■□□□ 1.74
MVB12A-211ENST00000529939 MYO5BQ9ULV0 1848 aa25.9■■□□□ 1.74
MVB12A-211ENST00000529939 UNC13BO14795 1591 aa25.9■■□□□ 1.74
MVB12A-211ENST00000529939 HDGFP51858 240 aaKnown RBP25.88■■□□□ 1.73
MVB12A-211ENST00000529939 CHD2O14647 1828 aaKnown RBP25.88■■□□□ 1.73
MVB12A-211ENST00000529939 PPP1R15AO75807 674 aaPredicted RBP25.86■■□□□ 1.73
MVB12A-211ENST00000529939 SLAIN2Q9P270 581 aa25.86■■□□□ 1.73
MVB12A-211ENST00000529939 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
MVB12A-211ENST00000529939 NCOA3Q9Y6Q9 1424 aa25.83■■□□□ 1.73
MVB12A-211ENST00000529939 POTEAQ6S8J7 498 aa25.83■■□□□ 1.73
MVB12A-211ENST00000529939 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.82■■□□□ 1.72
MVB12A-211ENST00000529939 E9PCH4 1651 aa25.82■■□□□ 1.72
MVB12A-211ENST00000529939 ROCK1Q13464 1354 aa25.82■■□□□ 1.72
MVB12A-211ENST00000529939 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
MVB12A-211ENST00000529939 ADAMTS13Q76LX8 1427 aa25.8■■□□□ 1.72
MVB12A-211ENST00000529939 DIP2AQ14689 1571 aa25.79■■□□□ 1.72
MVB12A-211ENST00000529939 IQGAP3Q86VI3 1631 aa25.79■■□□□ 1.72
MVB12A-211ENST00000529939 JCADQ9P266 1359 aa25.79■■□□□ 1.72
MVB12A-211ENST00000529939 PIK3R4Q99570 1358 aa25.77■■□□□ 1.72
MVB12A-211ENST00000529939 CHGAP10645 457 aaKnown RBP25.76■■□□□ 1.71
MVB12A-211ENST00000529939 COL16A1Q07092 1604 aaPredicted RBP25.75■■□□□ 1.71
MVB12A-211ENST00000529939 NUTM2DQ5VT03 806 aaPredicted RBP25.72■■□□□ 1.71
MVB12A-211ENST00000529939 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
MVB12A-211ENST00000529939 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.71■■□□□ 1.71
MVB12A-211ENST00000529939 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
MVB12A-211ENST00000529939 C19orf44Q9H6X5 657 aa25.7■■□□□ 1.7
MVB12A-211ENST00000529939 NUP155O75694 1391 aa25.69■■□□□ 1.7
MVB12A-211ENST00000529939 TRPM2O94759 1503 aa25.69■■□□□ 1.7
MVB12A-211ENST00000529939 C14orf37Q86TY3 774 aa25.69■■□□□ 1.7
MVB12A-211ENST00000529939 AHDC1Q5TGY3 1603 aaPredicted RBP25.69■■□□□ 1.7
MVB12A-211ENST00000529939 SPATA31A6Q5VVP1 1343 aa25.66■■□□□ 1.7
MVB12A-211ENST00000529939 PTPRUQ92729 1446 aa25.66■■□□□ 1.7
MVB12A-211ENST00000529939 LRP6O75581 1613 aa25.66■■□□□ 1.7
MVB12A-211ENST00000529939 ATF3P18847 181 aa25.65■■□□□ 1.7
MVB12A-211ENST00000529939 AMOTL2Q9Y2J4 779 aa25.64■■□□□ 1.7
MVB12A-211ENST00000529939 NRXN3Q9Y4C0 1643 aa25.62■■□□□ 1.69
MVB12A-211ENST00000529939 DCCP43146 1447 aa25.62■■□□□ 1.69
MVB12A-211ENST00000529939 SHPRHQ149N8 1683 aa25.61■■□□□ 1.69
MVB12A-211ENST00000529939 SETBP1Q9Y6X0 1596 aa25.61■■□□□ 1.69
MVB12A-211ENST00000529939 SETD1AO15047 1707 aaKnown RBP25.6■■□□□ 1.69
MVB12A-211ENST00000529939 XRN1Q8IZH2 1706 aaKnown RBP25.6■■□□□ 1.69
MVB12A-211ENST00000529939 SPHKAPQ2M3C7 1700 aa25.58■■□□□ 1.69
MVB12A-211ENST00000529939 ITGAEP38570 1179 aa25.58■■□□□ 1.69
MVB12A-211ENST00000529939 BRINP3Q76B58 766 aa25.58■■□□□ 1.69
MVB12A-211ENST00000529939 MEX3CQ5U5Q3 659 aaKnown RBP25.55■■□□□ 1.68
MVB12A-211ENST00000529939 ZNF772Q68DY9 489 aaPredicted RBP25.55■■□□□ 1.68
MVB12A-211ENST00000529939 ASXL1Q8IXJ9 1541 aa25.53■■□□□ 1.68
MVB12A-211ENST00000529939 MST1RQ04912 1400 aa25.53■■□□□ 1.68
MVB12A-211ENST00000529939 METP08581 1390 aa25.52■■□□□ 1.68
MVB12A-211ENST00000529939 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
MVB12A-211ENST00000529939 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
MVB12A-211ENST00000529939 SETD5Q9C0A6 1442 aa25.5■■□□□ 1.67
MVB12A-211ENST00000529939 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
MVB12A-211ENST00000529939 NEXMIFQ5QGS0 1516 aa25.48■■□□□ 1.67
MVB12A-211ENST00000529939 NHSL1Q5SYE7 1610 aa25.48■■□□□ 1.67
MVB12A-211ENST00000529939 ADGRL3Q9HAR2 1447 aa25.47■■□□□ 1.67
MVB12A-211ENST00000529939 NUTM2BA6NNL0 878 aaPredicted RBP25.43■■□□□ 1.66
MVB12A-211ENST00000529939 NUTM2EB1AL46 878 aaPredicted RBP25.43■■□□□ 1.66
MVB12A-211ENST00000529939 NUTM2AQ8IVF1 878 aaPredicted RBP25.43■■□□□ 1.66
MVB12A-211ENST00000529939 TRIM52Q96A61 297 aa25.43■■□□□ 1.66
MVB12A-211ENST00000529939 UPF1Q92900 1129 aaKnown RBP eCLIP25.42■■□□□ 1.661e-6■■■■□ 25.6
MVB12A-211ENST00000529939 CDK12Q9NYV4 1490 aaPredicted RBP25.41■■□□□ 1.66
MVB12A-211ENST00000529939 NALCNQ8IZF0 1738 aa25.41■■□□□ 1.66
MVB12A-211ENST00000529939 RXRBP28702 533 aa25.41■■□□□ 1.66
MVB12A-211ENST00000529939 LRRC59Q96AG4 307 aaKnown RBP25.41■■□□□ 1.66
MVB12A-211ENST00000529939 NAIPQ13075 1403 aa25.39■■□□□ 1.66
MVB12A-211ENST00000529939 AFF2P51816 1311 aa25.38■■□□□ 1.65
MVB12A-211ENST00000529939 KIF1BO60333 1816 aa25.38■■□□□ 1.65
MVB12A-211ENST00000529939 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
MVB12A-211ENST00000529939 PNPLA6Q8IY17 1366 aa25.37■■□□□ 1.65
MVB12A-211ENST00000529939 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
MVB12A-211ENST00000529939 DDX17Q92841 729 aaKnown RBP25.35■■□□□ 1.65
MVB12A-211ENST00000529939 PRAG1Q86YV5 1406 aa25.35■■□□□ 1.65
MVB12A-211ENST00000529939 LAMC1P11047 1609 aa25.34■■□□□ 1.65
MVB12A-211ENST00000529939 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
MVB12A-211ENST00000529939 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
MVB12A-211ENST00000529939 C8orf37Q96NL8 207 aa25.3■■□□□ 1.64
MVB12A-211ENST00000529939 RPGRIP1LQ68CZ1 1315 aa25.29■■□□□ 1.64
MVB12A-211ENST00000529939 HFM1A2PYH4 1435 aa25.28■■□□□ 1.64
MVB12A-211ENST00000529939 SOS2Q07890 1332 aaPredicted RBP25.27■■□□□ 1.64
MVB12A-211ENST00000529939 RGS12O14924 1447 aa25.27■■□□□ 1.64
MVB12A-211ENST00000529939 RBM6P78332 1123 aaKnown RBP25.26■■□□□ 1.63
MVB12A-211ENST00000529939 QTRT2Q9H974 415 aaKnown RBP25.26■■□□□ 1.63
MVB12A-211ENST00000529939 ORAI2Q96SN7 254 aa25.24■■□□□ 1.63
MVB12A-211ENST00000529939 PPLO60437 1756 aa25.23■■□□□ 1.63
MVB12A-211ENST00000529939 SLC4A1APQ9BWU0 796 aaKnown RBP25.21■■□□□ 1.63
MVB12A-211ENST00000529939 ADAMTS2O95450 1211 aa25.2■■□□□ 1.62
MVB12A-211ENST00000529939 NGLY1Q96IV0 654 aa25.2■■□□□ 1.62
MVB12A-211ENST00000529939 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
MVB12A-211ENST00000529939 COL22A1Q8NFW1 1626 aaPredicted RBP25.17■■□□□ 1.62
MVB12A-211ENST00000529939 FNBP4Q8N3X1 1017 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms