RNA–Protein interactions for RNA: ENST00000529895.1

BBS1-216, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 2

Gene BBS1, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-216ENST00000529895 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
BBS1-216ENST00000529895 SLIT1O75093 1534 aa22.13■■□□□ 1.13
BBS1-216ENST00000529895 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
BBS1-216ENST00000529895 EID1Q9Y6B2 187 aa22.12■■□□□ 1.13
BBS1-216ENST00000529895 ZFYVE9O95405 1425 aa22.12■■□□□ 1.13
BBS1-216ENST00000529895 NEURL4Q96JN8 1562 aa22.12■■□□□ 1.13
BBS1-216ENST00000529895 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
BBS1-216ENST00000529895 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.1■■□□□ 1.13
BBS1-216ENST00000529895 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
BBS1-216ENST00000529895 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.13
BBS1-216ENST00000529895 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
BBS1-216ENST00000529895 DCAF11Q8TEB1 546 aa22.07■■□□□ 1.12
BBS1-216ENST00000529895 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
BBS1-216ENST00000529895 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
BBS1-216ENST00000529895 VGFO15240 615 aaPredicted RBP22.06■■□□□ 1.12
BBS1-216ENST00000529895 SCAF11Q99590 1463 aaKnown RBP22.06■■□□□ 1.12
BBS1-216ENST00000529895 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
BBS1-216ENST00000529895 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
BBS1-216ENST00000529895 PPLO60437 1756 aa22.02■■□□□ 1.12
BBS1-216ENST00000529895 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
BBS1-216ENST00000529895 BCANQ96GW7 911 aa22.02■■□□□ 1.12
BBS1-216ENST00000529895 MED14O60244 1454 aa22.01■■□□□ 1.11
BBS1-216ENST00000529895 PLEKHG1Q9ULL1 1385 aa22■■□□□ 1.11
BBS1-216ENST00000529895 IFT172Q9UG01 1749 aa22■■□□□ 1.11
BBS1-216ENST00000529895 NPHP4O75161 1426 aaPredicted RBP22■■□□□ 1.11
BBS1-216ENST00000529895 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
BBS1-216ENST00000529895 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
BBS1-216ENST00000529895 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
BBS1-216ENST00000529895 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
BBS1-216ENST00000529895 MYOM2P54296 1465 aa21.96■■□□□ 1.11
BBS1-216ENST00000529895 TIMELESSQ9UNS1 1208 aa21.96■■□□□ 1.11
BBS1-216ENST00000529895 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
BBS1-216ENST00000529895 IQGAP1P46940 1657 aa21.93■■□□□ 1.1
BBS1-216ENST00000529895 ADAMTS13Q76LX8 1427 aa21.92■■□□□ 1.1
BBS1-216ENST00000529895 TBX22Q9Y458 520 aa21.92■■□□□ 1.1
BBS1-216ENST00000529895 PIK3C2GO75747 1445 aa21.91■■□□□ 1.1
BBS1-216ENST00000529895 CFAP70Q5T0N1 1121 aa21.91■■□□□ 1.1
BBS1-216ENST00000529895 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
BBS1-216ENST00000529895 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
BBS1-216ENST00000529895 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
BBS1-216ENST00000529895 C14orf93Q9H972 538 aaKnown RBP21.9■■□□□ 1.1
BBS1-216ENST00000529895 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
BBS1-216ENST00000529895 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
BBS1-216ENST00000529895 METP08581 1390 aa21.86■■□□□ 1.09
BBS1-216ENST00000529895 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
BBS1-216ENST00000529895 NBPF1Q3BBV0 1214 aa21.83■■□□□ 1.09
BBS1-216ENST00000529895 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
BBS1-216ENST00000529895 SETD1AO15047 1707 aaKnown RBP21.81■■□□□ 1.08
BBS1-216ENST00000529895 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
BBS1-216ENST00000529895 KCNA6P17658 529 aa21.8■■□□□ 1.08
BBS1-216ENST00000529895 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
BBS1-216ENST00000529895 PIK3R4Q99570 1358 aa21.79■■□□□ 1.08
BBS1-216ENST00000529895 AMOTL2Q9Y2J4 779 aa21.79■■□□□ 1.08
BBS1-216ENST00000529895 ASXL1Q8IXJ9 1541 aa21.78■■□□□ 1.08
BBS1-216ENST00000529895 STK26Q9P289 416 aa21.77■■□□□ 1.08
BBS1-216ENST00000529895 LAMC1P11047 1609 aa21.77■■□□□ 1.07
BBS1-216ENST00000529895 KIAA1210Q9ULL0 1709 aa21.76■■□□□ 1.07
BBS1-216ENST00000529895 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
BBS1-216ENST00000529895 TRPM1Q7Z4N2 1603 aa21.75■■□□□ 1.07
BBS1-216ENST00000529895 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
BBS1-216ENST00000529895 LRPPRCP42704 1394 aaKnown RBP21.74■■□□□ 1.07
BBS1-216ENST00000529895 YTHDC2Q9H6S0 1430 aaKnown RBP21.73■■□□□ 1.07
BBS1-216ENST00000529895 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
BBS1-216ENST00000529895 RALGAPBQ86X10 1494 aa21.72■■□□□ 1.07
BBS1-216ENST00000529895 STRCP1A6NGW2 1772 aa21.72■■□□□ 1.07
BBS1-216ENST00000529895 TRAK1Q9UPV9 953 aa21.71■■□□□ 1.07
BBS1-216ENST00000529895 ABCC11Q96J66 1382 aa21.71■■□□□ 1.07
BBS1-216ENST00000529895 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
BBS1-216ENST00000529895 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
BBS1-216ENST00000529895 RBM33Q96EV2 1170 aaKnown RBP21.69■■□□□ 1.06
BBS1-216ENST00000529895 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
BBS1-216ENST00000529895 GPRASP1Q5JY77 1395 aa21.68■■□□□ 1.06
BBS1-216ENST00000529895 LTBP4Q8N2S1 1624 aa21.68■■□□□ 1.06
BBS1-216ENST00000529895 XRN1Q8IZH2 1706 aaKnown RBP21.68■■□□□ 1.06
BBS1-216ENST00000529895 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
BBS1-216ENST00000529895 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
BBS1-216ENST00000529895 WAPLQ7Z5K2 1190 aa21.67■■□□□ 1.06
BBS1-216ENST00000529895 SIRT1Q96EB6 747 aa21.66■■□□□ 1.06
BBS1-216ENST00000529895 TECPR2O15040 1411 aa21.65■■□□□ 1.06
BBS1-216ENST00000529895 CPS1P31327 1500 aa21.64■■□□□ 1.05
BBS1-216ENST00000529895 LRRC7Q96NW7 1537 aa21.64■■□□□ 1.05
BBS1-216ENST00000529895 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
BBS1-216ENST00000529895 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
BBS1-216ENST00000529895 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
BBS1-216ENST00000529895 PLEKHH1Q9ULM0 1364 aa21.62■■□□□ 1.05
BBS1-216ENST00000529895 POGKQ9P215 609 aa21.62■■□□□ 1.05
BBS1-216ENST00000529895 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
BBS1-216ENST00000529895 TMEM94Q12767 1356 aa21.61■■□□□ 1.05
BBS1-216ENST00000529895 DLC1Q96QB1 1528 aa21.61■■□□□ 1.05
BBS1-216ENST00000529895 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
BBS1-216ENST00000529895 FAM135BQ49AJ0 1406 aa21.61■■□□□ 1.05
BBS1-216ENST00000529895 ARHGEF28Q8N1W1 1705 aaKnown RBP21.56■■□□□ 1.04
BBS1-216ENST00000529895 C14orf37Q86TY3 774 aa21.56■■□□□ 1.04
BBS1-216ENST00000529895 CERKQ8TCT0 537 aa21.56■■□□□ 1.04
BBS1-216ENST00000529895 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
BBS1-216ENST00000529895 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
BBS1-216ENST00000529895 NCOA3Q9Y6Q9 1424 aa21.55■■□□□ 1.04
BBS1-216ENST00000529895 USP47Q96K76 1375 aa21.54■■□□□ 1.04
BBS1-216ENST00000529895 MINK1Q8N4C8 1332 aaPredicted RBP21.54■■□□□ 1.04
BBS1-216ENST00000529895 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms