RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
COPB1-207ENST00000529866 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
COPB1-207ENST00000529866 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
COPB1-207ENST00000529866 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
COPB1-207ENST00000529866 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
COPB1-207ENST00000529866 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
COPB1-207ENST00000529866 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
COPB1-207ENST00000529866 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
COPB1-207ENST00000529866 PHLPP1O60346 1717 aa16.33■□□□□ 0.21
COPB1-207ENST00000529866 APLP2Q06481 763 aa16.33■□□□□ 0.2
COPB1-207ENST00000529866 PTPN23Q9H3S7 1636 aa16.33■□□□□ 0.2
COPB1-207ENST00000529866 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
COPB1-207ENST00000529866 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
COPB1-207ENST00000529866 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
COPB1-207ENST00000529866 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
COPB1-207ENST00000529866 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
COPB1-207ENST00000529866 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
COPB1-207ENST00000529866 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
COPB1-207ENST00000529866 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.3■□□□□ 0.2
COPB1-207ENST00000529866 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
COPB1-207ENST00000529866 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
COPB1-207ENST00000529866 LRP6O75581 1613 aa16.3■□□□□ 0.2
COPB1-207ENST00000529866 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
COPB1-207ENST00000529866 ATF3P18847 181 aa16.29■□□□□ 0.2
COPB1-207ENST00000529866 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
COPB1-207ENST00000529866 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
COPB1-207ENST00000529866 RXRBP28702 533 aa16.27■□□□□ 0.2
COPB1-207ENST00000529866 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
COPB1-207ENST00000529866 AHDC1Q5TGY3 1603 aaPredicted RBP16.26■□□□□ 0.19
COPB1-207ENST00000529866 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
COPB1-207ENST00000529866 ADGRL2O95490 1459 aa16.24■□□□□ 0.19
COPB1-207ENST00000529866 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
COPB1-207ENST00000529866 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
COPB1-207ENST00000529866 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
COPB1-207ENST00000529866 ADAMTS13Q76LX8 1427 aa16.22■□□□□ 0.19
COPB1-207ENST00000529866 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
COPB1-207ENST00000529866 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
COPB1-207ENST00000529866 BRINP3Q76B58 766 aa16.21■□□□□ 0.19
COPB1-207ENST00000529866 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
COPB1-207ENST00000529866 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.19
COPB1-207ENST00000529866 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
COPB1-207ENST00000529866 DCCP43146 1447 aa16.2■□□□□ 0.18
COPB1-207ENST00000529866 TMEM131LA2VDJ0 1609 aa16.19■□□□□ 0.18
COPB1-207ENST00000529866 AFF2P51816 1311 aa16.19■□□□□ 0.18
COPB1-207ENST00000529866 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
COPB1-207ENST00000529866 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
COPB1-207ENST00000529866 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
COPB1-207ENST00000529866 AMOTL2Q9Y2J4 779 aa16.18■□□□□ 0.18
COPB1-207ENST00000529866 TRPM2O94759 1503 aa16.18■□□□□ 0.18
COPB1-207ENST00000529866 GCC2Q8IWJ2 1684 aa16.18■□□□□ 0.18
COPB1-207ENST00000529866 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
COPB1-207ENST00000529866 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
COPB1-207ENST00000529866 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
COPB1-207ENST00000529866 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
COPB1-207ENST00000529866 RBM6P78332 1123 aaKnown RBP16.13■□□□□ 0.17
COPB1-207ENST00000529866 C8orf37Q96NL8 207 aa16.13■□□□□ 0.17
COPB1-207ENST00000529866 RGS12O14924 1447 aa16.12■□□□□ 0.17
COPB1-207ENST00000529866 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
COPB1-207ENST00000529866 MST1RQ04912 1400 aa16.11■□□□□ 0.17
COPB1-207ENST00000529866 QTRT2Q9H974 415 aaKnown RBP16.11■□□□□ 0.17
COPB1-207ENST00000529866 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
COPB1-207ENST00000529866 UNC13BO14795 1591 aa16.1■□□□□ 0.17
COPB1-207ENST00000529866 FOXD1Q16676 465 aa16.1■□□□□ 0.17
COPB1-207ENST00000529866 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
COPB1-207ENST00000529866 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
COPB1-207ENST00000529866 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
COPB1-207ENST00000529866 ADGRL3Q9HAR2 1447 aa16.07■□□□□ 0.16
COPB1-207ENST00000529866 SETBP1Q9Y6X0 1596 aa16.06■□□□□ 0.16
COPB1-207ENST00000529866 NUP155O75694 1391 aa16.06■□□□□ 0.16
COPB1-207ENST00000529866 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
COPB1-207ENST00000529866 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
COPB1-207ENST00000529866 E9PCH4 1651 aa16.05■□□□□ 0.16
COPB1-207ENST00000529866 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
COPB1-207ENST00000529866 NHSL1Q5SYE7 1610 aa16.05■□□□□ 0.16
COPB1-207ENST00000529866 ADAMTS2O95450 1211 aa16.04■□□□□ 0.16
COPB1-207ENST00000529866 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
COPB1-207ENST00000529866 METP08581 1390 aa16.03■□□□□ 0.16
COPB1-207ENST00000529866 DDX17Q92841 729 aaKnown RBP16.03■□□□□ 0.16
COPB1-207ENST00000529866 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
COPB1-207ENST00000529866 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
COPB1-207ENST00000529866 USP21Q9UK80 565 aa16.01■□□□□ 0.15
COPB1-207ENST00000529866 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
COPB1-207ENST00000529866 NRXN3Q9Y4C0 1643 aa16■□□□□ 0.15
COPB1-207ENST00000529866 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
COPB1-207ENST00000529866 SOS2Q07890 1332 aaPredicted RBP15.97■□□□□ 0.15
COPB1-207ENST00000529866 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
COPB1-207ENST00000529866 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
COPB1-207ENST00000529866 ATRNO75882 1429 aa15.94■□□□□ 0.14
COPB1-207ENST00000529866 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
COPB1-207ENST00000529866 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
COPB1-207ENST00000529866 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
COPB1-207ENST00000529866 LAMC1P11047 1609 aa15.91■□□□□ 0.14
COPB1-207ENST00000529866 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
COPB1-207ENST00000529866 ITGAEP38570 1179 aa15.91■□□□□ 0.14
COPB1-207ENST00000529866 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
COPB1-207ENST00000529866 EP400Q96L91 3159 aa15.9■□□□□ 0.14
COPB1-207ENST00000529866 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
COPB1-207ENST00000529866 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
COPB1-207ENST00000529866 SPHKAPQ2M3C7 1700 aa15.9■□□□□ 0.14
COPB1-207ENST00000529866 MYOM2P54296 1465 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms