RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 RPGRIP1LQ68CZ1 1315 aa25.47■■□□□ 1.67
CLP1-204ENST00000529773 CHGAP10645 457 aaKnown RBP25.47■■□□□ 1.67
CLP1-204ENST00000529773 ANKLE2Q86XL3 938 aa25.46■■□□□ 1.67
CLP1-204ENST00000529773 LTKP29376 864 aa25.45■■□□□ 1.66
CLP1-204ENST00000529773 IQGAP1P46940 1657 aa25.44■■□□□ 1.66
CLP1-204ENST00000529773 MYOM2P54296 1465 aa25.43■■□□□ 1.66
CLP1-204ENST00000529773 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.43■■□□□ 1.66
CLP1-204ENST00000529773 NPHP4O75161 1426 aaPredicted RBP25.43■■□□□ 1.66
CLP1-204ENST00000529773 PLEKHG1Q9ULL1 1385 aa25.43■■□□□ 1.66
CLP1-204ENST00000529773 EID1Q9Y6B2 187 aa25.42■■□□□ 1.66
CLP1-204ENST00000529773 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
CLP1-204ENST00000529773 SETBP1Q9Y6X0 1596 aa25.41■■□□□ 1.66
CLP1-204ENST00000529773 HDGFP51858 240 aaKnown RBP25.41■■□□□ 1.66
CLP1-204ENST00000529773 TXNDC2Q86VQ3 553 aa25.41■■□□□ 1.66
CLP1-204ENST00000529773 NRXN1Q9ULB1 1477 aa25.4■■□□□ 1.66
CLP1-204ENST00000529773 NRXN3Q9Y4C0 1643 aa25.39■■□□□ 1.66
CLP1-204ENST00000529773 ZNF326Q5BKZ1 582 aaKnown RBP25.39■■□□□ 1.66
CLP1-204ENST00000529773 DIP2AQ14689 1571 aa25.37■■□□□ 1.65
CLP1-204ENST00000529773 SIN3AQ96ST3 1273 aa25.37■■□□□ 1.65
CLP1-204ENST00000529773 DMRT2Q9Y5R5 561 aa25.36■■□□□ 1.65
CLP1-204ENST00000529773 RGL3Q3MIN7 710 aa25.35■■□□□ 1.65
CLP1-204ENST00000529773 VGFO15240 615 aaPredicted RBP25.34■■□□□ 1.65
CLP1-204ENST00000529773 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
CLP1-204ENST00000529773 ADAMTS13Q76LX8 1427 aa25.34■■□□□ 1.65
CLP1-204ENST00000529773 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
CLP1-204ENST00000529773 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
CLP1-204ENST00000529773 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
CLP1-204ENST00000529773 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
CLP1-204ENST00000529773 LAMC1P11047 1609 aa25.28■■□□□ 1.64
CLP1-204ENST00000529773 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
CLP1-204ENST00000529773 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
CLP1-204ENST00000529773 ALKQ9UM73 1620 aa25.26■■□□□ 1.63
CLP1-204ENST00000529773 NEUROD1Q13562 356 aa25.25■■□□□ 1.63
CLP1-204ENST00000529773 NWD1Q149M9 1564 aa25.24■■□□□ 1.63
CLP1-204ENST00000529773 L3MBTL2Q969R5 705 aa25.24■■□□□ 1.63
CLP1-204ENST00000529773 TONSLQ96HA7 1378 aa25.23■■□□□ 1.63
CLP1-204ENST00000529773 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
CLP1-204ENST00000529773 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
CLP1-204ENST00000529773 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
CLP1-204ENST00000529773 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
CLP1-204ENST00000529773 TIMELESSQ9UNS1 1208 aa25.21■■□□□ 1.63
CLP1-204ENST00000529773 KIAA1210Q9ULL0 1709 aa25.2■■□□□ 1.63
CLP1-204ENST00000529773 ASXL1Q8IXJ9 1541 aa25.2■■□□□ 1.62
CLP1-204ENST00000529773 XRN1Q8IZH2 1706 aaKnown RBP25.17■■□□□ 1.62
CLP1-204ENST00000529773 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
CLP1-204ENST00000529773 LTBP4Q8N2S1 1624 aa25.17■■□□□ 1.62
CLP1-204ENST00000529773 SLC26A8Q96RN1 970 aa25.17■■□□□ 1.62
CLP1-204ENST00000529773 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
CLP1-204ENST00000529773 ADGRB1O14514 1584 aa25.16■■□□□ 1.62
CLP1-204ENST00000529773 METP08581 1390 aa25.16■■□□□ 1.62
CLP1-204ENST00000529773 C14orf93Q9H972 538 aaKnown RBP25.15■■□□□ 1.62
CLP1-204ENST00000529773 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
CLP1-204ENST00000529773 CPS1P31327 1500 aa25.14■■□□□ 1.62
CLP1-204ENST00000529773 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
CLP1-204ENST00000529773 BCANQ96GW7 911 aa25.13■■□□□ 1.61
CLP1-204ENST00000529773 KDM2AQ9Y2K7 1162 aa25.13■■□□□ 1.61
CLP1-204ENST00000529773 TRPM1Q7Z4N2 1603 aa25.12■■□□□ 1.61
CLP1-204ENST00000529773 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
CLP1-204ENST00000529773 KNDC1Q76NI1 1749 aa25.11■■□□□ 1.61
CLP1-204ENST00000529773 TECPR2O15040 1411 aa25.1■■□□□ 1.61
CLP1-204ENST00000529773 KCNA6P17658 529 aa25.09■■□□□ 1.61
CLP1-204ENST00000529773 CFAP70Q5T0N1 1121 aa25.08■■□□□ 1.61
CLP1-204ENST00000529773 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
CLP1-204ENST00000529773 PTCH1Q13635 1447 aa25.08■■□□□ 1.61
CLP1-204ENST00000529773 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
CLP1-204ENST00000529773 RALGAPBQ86X10 1494 aa25.06■■□□□ 1.6
CLP1-204ENST00000529773 YTHDC2Q9H6S0 1430 aaKnown RBP25.04■■□□□ 1.6
CLP1-204ENST00000529773 GPRASP1Q5JY77 1395 aa25.04■■□□□ 1.6
CLP1-204ENST00000529773 LRRC7Q96NW7 1537 aa25.03■■□□□ 1.6
CLP1-204ENST00000529773 DLC1Q96QB1 1528 aa25.03■■□□□ 1.6
CLP1-204ENST00000529773 NBPF8Q3BBV2 869 aa25.03■■□□□ 1.6
CLP1-204ENST00000529773 ABCC11Q96J66 1382 aa25.03■■□□□ 1.6
CLP1-204ENST00000529773 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
CLP1-204ENST00000529773 AMOTL2Q9Y2J4 779 aa25.01■■□□□ 1.59
CLP1-204ENST00000529773 NCOA3Q9Y6Q9 1424 aa24.99■■□□□ 1.59
CLP1-204ENST00000529773 XIRP1Q702N8 1843 aaKnown RBP24.98■■□□□ 1.59
CLP1-204ENST00000529773 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
CLP1-204ENST00000529773 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
CLP1-204ENST00000529773 TMEM132EQ6IEE7 984 aa24.97■■□□□ 1.59
CLP1-204ENST00000529773 ARHGEF28Q8N1W1 1705 aaKnown RBP24.95■■□□□ 1.59
CLP1-204ENST00000529773 NBPF1Q3BBV0 1214 aa24.95■■□□□ 1.58
CLP1-204ENST00000529773 SIRT1Q96EB6 747 aa24.95■■□□□ 1.58
CLP1-204ENST00000529773 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
CLP1-204ENST00000529773 TMEM94Q12767 1356 aa24.93■■□□□ 1.58
CLP1-204ENST00000529773 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.57
CLP1-204ENST00000529773 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
CLP1-204ENST00000529773 PROSER2Q86WR7 435 aaPredicted RBP24.88■■□□□ 1.57
CLP1-204ENST00000529773 DCCP43146 1447 aa24.86■■□□□ 1.57
CLP1-204ENST00000529773 ADGRB2O60241 1585 aa24.86■■□□□ 1.57
CLP1-204ENST00000529773 CERKQ8TCT0 537 aa24.86■■□□□ 1.57
CLP1-204ENST00000529773 STK26Q9P289 416 aa24.86■■□□□ 1.57
CLP1-204ENST00000529773 PLEKHH1Q9ULM0 1364 aa24.85■■□□□ 1.57
CLP1-204ENST00000529773 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.84■■□□□ 1.57
CLP1-204ENST00000529773 CDC42BPGQ6DT37 1551 aa24.84■■□□□ 1.57
CLP1-204ENST00000529773 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
CLP1-204ENST00000529773 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
CLP1-204ENST00000529773 CARD11Q9BXL7 1154 aa24.81■■□□□ 1.56
CLP1-204ENST00000529773 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
CLP1-204ENST00000529773 MSH6P52701 1360 aa24.8■■□□□ 1.56
CLP1-204ENST00000529773 WAPLQ7Z5K2 1190 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms