RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CD46P15529 392 aa5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 GJA5P36382 358 aa5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 SRPK2P78362 688 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 HDGFL1Q5TGJ6 251 aa5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 ZNF710Q8N1W2 664 aa5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 USTQ9Y2C2 406 aa5.89□□□□□ -1.47
AMBRA1-208ENST00000529558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-208ENST00000529558 KDM4FA0A1W2PPD8 638 aa5.88□□□□□ -1.47
AMBRA1-208ENST00000529558 AP1G2O75843 785 aa5.88□□□□□ -1.47
AMBRA1-208ENST00000529558 QPCTQ16769 361 aa5.88□□□□□ -1.47
AMBRA1-208ENST00000529558 LOC105371045A0A1W2PR82 267 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 MOXD2PA6NHM9 499 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 FOSBP53539 338 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 PRSS12P56730 875 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 CSPP1Q1MSJ5 1256 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 RTL5Q5HYW3 569 aaPredicted RBP5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 CFAP70Q5T0N1 1121 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 NUTM1Q86Y26 1132 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 ADAMTS19Q8TE59 1207 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 PCDHGA4Q9Y5G9 962 aa5.87□□□□□ -1.47
AMBRA1-208ENST00000529558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 E9PSI1 815 aa5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 CSB-PGBD3P0DP91 1061 aa5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 RFX1P22670 979 aa5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 WASHC4Q2M389 1173 aa5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 GJD4Q96KN9 370 aaPredicted RBP5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 COLQQ9Y215 455 aaPredicted RBP5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 PCDHB15Q9Y5E8 787 aa5.86□□□□□ -1.47
AMBRA1-208ENST00000529558 RCCD1A6NED2 376 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 SEC24BO95487 1268 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 USP17L8P0C7I0 530 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 NDUFV2P19404 249 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 SULF1Q8IWU6 871 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 ZDHHC16Q969W1 377 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 CDCA7LQ96GN5 454 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 EYA1Q99502 592 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 NDUFB9Q9Y6M9 179 aa5.85□□□□□ -1.47
AMBRA1-208ENST00000529558 NUTM2BA6NNL0 878 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 NUTM2EB1AL46 878 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 IGSF3O75054 1194 aa5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 NUTM2DQ5VT03 806 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 PRPF38BQ5VTL8 546 aaKnown RBP5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 NUTM2AQ8IVF1 878 aaPredicted RBP5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 PPP1R12CQ9BZL4 782 aa5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 AMOTL2Q9Y2J4 779 aa5.84□□□□□ -1.47
AMBRA1-208ENST00000529558 SHROOM4Q9ULL8 1493 aa5.83□□□□□ -1.48
AMBRA1-208ENST00000529558 C3orf67Q6ZVT6 689 aa5.83□□□□□ -1.48
AMBRA1-208ENST00000529558 CARNS1A5YM72 827 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 DDX11L8A8MPP1 907 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 CCDC27Q2M243 656 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 CABLES1Q8TDN4 633 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 ADAM33Q9BZ11 813 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 ALG2Q9H553 416 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 FAM198AQ9UFP1 575 aa5.82□□□□□ -1.48
AMBRA1-208ENST00000529558 PALM3A6NDB9 673 aaPredicted RBP5.81□□□□□ -1.48
AMBRA1-208ENST00000529558 GPR37L1O60883 481 aa5.81□□□□□ -1.48
AMBRA1-208ENST00000529558 ZNF454Q8N9F8 522 aa5.81□□□□□ -1.48
AMBRA1-208ENST00000529558 VRTNQ9H8Y1 702 aa5.81□□□□□ -1.48
AMBRA1-208ENST00000529558 IVNS1ABPQ9Y6Y0 642 aa5.81□□□□□ -1.48
AMBRA1-208ENST00000529558 POTEFA5A3E0 1075 aa5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 LMOD1P29536 600 aaPredicted RBP5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 CTDSPL2Q05D32 466 aa5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 VAC14Q08AM6 782 aa5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 SND1Q7KZF4 910 aaKnown RBP eCLIP5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 PELP1Q8IZL8 1130 aaKnown RBP5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 ZBTB3Q9H5J0 574 aa5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 TFIP11Q9UBB9 837 aaKnown RBP5.8□□□□□ -1.48
AMBRA1-208ENST00000529558 TMEM88BA6NKF7 163 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 KDM4AO75164 1064 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 ATG7O95352 703 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 DNAJB2P25686 324 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 EVX2Q03828 476 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 TMEM134Q9H6X4 195 aa5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 HMX1Q9NP08 348 aaPredicted RBP5.79□□□□□ -1.48
AMBRA1-208ENST00000529558 USP46P62068 366 aa5.78□□□□□ -1.48
AMBRA1-208ENST00000529558 NUDT18Q6ZVK8 323 aa5.78□□□□□ -1.48
AMBRA1-208ENST00000529558 C3orf80F5H4A9 247 aa5.77□□□□□ -1.49
AMBRA1-208ENST00000529558 SLC39A7Q92504 469 aa5.77□□□□□ -1.49
AMBRA1-208ENST00000529558 UCN2Q96RP3 112 aa5.77□□□□□ -1.49
AMBRA1-208ENST00000529558 TSKSQ9UJT2 592 aa5.77□□□□□ -1.49
AMBRA1-208ENST00000529558 GNEQ9Y223 722 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-208ENST00000529558 HAX1O00165 279 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 HOXA2O43364 376 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 FDX1P10109 184 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 C7P10643 843 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 COL9A1P20849 921 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 SOX11P35716 441 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 GCGRP47871 477 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 CDCA8Q53HL2 280 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 RDH13Q8NBN7 331 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 PRR7Q8TB68 274 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 TATDN2Q93075 761 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 PCDHGC3Q9UN70 934 aa5.76□□□□□ -1.49
AMBRA1-208ENST00000529558 LRRN4Q8WUT4 740 aa5.75□□□□□ -1.49
AMBRA1-208ENST00000529558 NBPF26B4DH59 902 aa5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 NUDT7P0C024 238 aa5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 SEMA3FQ13275 785 aa5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 MTMR2Q13614 643 aa5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 HELBQ8NG08 1087 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms