RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 ADGRB3O60242 1522 aa28.58■■■□□ 2.17
PTP4A2-212ENST00000529477 TXNDC2Q86VQ3 553 aa28.56■■■□□ 2.16
PTP4A2-212ENST00000529477 TMEM2Q9UHN6 1383 aa28.55■■■□□ 2.16
PTP4A2-212ENST00000529477 SPHKAPQ2M3C7 1700 aa28.51■■■□□ 2.15
PTP4A2-212ENST00000529477 CHGAP10645 457 aaKnown RBP28.5■■■□□ 2.15
PTP4A2-212ENST00000529477 LTKP29376 864 aa28.49■■■□□ 2.15
PTP4A2-212ENST00000529477 HDGFP51858 240 aaKnown RBP28.48■■■□□ 2.15
PTP4A2-212ENST00000529477 ACIN1Q9UKV3 1341 aaKnown RBP28.47■■■□□ 2.15
PTP4A2-212ENST00000529477 SLC4A1APQ9BWU0 796 aaKnown RBP28.47■■■□□ 2.15
PTP4A2-212ENST00000529477 RGS17Q9UGC6 210 aaPredicted RBP28.47■■■□□ 2.15
PTP4A2-212ENST00000529477 MYO5BQ9ULV0 1848 aa28.47■■■□□ 2.15
PTP4A2-212ENST00000529477 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
PTP4A2-212ENST00000529477 TMEM131LA2VDJ0 1609 aa28.46■■■□□ 2.15
PTP4A2-212ENST00000529477 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
PTP4A2-212ENST00000529477 SETD5Q9C0A6 1442 aa28.42■■■□□ 2.14
PTP4A2-212ENST00000529477 PPP1R15AO75807 674 aaPredicted RBP28.41■■■□□ 2.14
PTP4A2-212ENST00000529477 BCANQ96GW7 911 aa28.4■■■□□ 2.14
PTP4A2-212ENST00000529477 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.39■■■□□ 2.14
PTP4A2-212ENST00000529477 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.14
PTP4A2-212ENST00000529477 TRPM2O94759 1503 aa28.38■■■□□ 2.13
PTP4A2-212ENST00000529477 ROBO1Q9Y6N7 1651 aa28.37■■■□□ 2.13
PTP4A2-212ENST00000529477 ZFYVE9O95405 1425 aa28.35■■■□□ 2.13
PTP4A2-212ENST00000529477 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
PTP4A2-212ENST00000529477 TMEM94Q12767 1356 aa28.33■■■□□ 2.13
PTP4A2-212ENST00000529477 KIF1BO60333 1816 aa28.32■■■□□ 2.12
PTP4A2-212ENST00000529477 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
PTP4A2-212ENST00000529477 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
PTP4A2-212ENST00000529477 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
PTP4A2-212ENST00000529477 MPHOSPH9Q99550 1183 aa28.3■■■□□ 2.12
PTP4A2-212ENST00000529477 NKTRP30414 1462 aaKnown RBP28.29■■■□□ 2.12
PTP4A2-212ENST00000529477 RAB3GAP2Q9H2M9 1393 aa28.29■■■□□ 2.12
PTP4A2-212ENST00000529477 SLC26A8Q96RN1 970 aa28.29■■■□□ 2.12
PTP4A2-212ENST00000529477 KCNA6P17658 529 aa28.27■■■□□ 2.12
PTP4A2-212ENST00000529477 NUTM2DQ5VT03 806 aaPredicted RBP28.25■■■□□ 2.11
PTP4A2-212ENST00000529477 POTEAQ6S8J7 498 aa28.25■■■□□ 2.11
PTP4A2-212ENST00000529477 FOXD1Q16676 465 aa28.24■■■□□ 2.11
PTP4A2-212ENST00000529477 CCDC144AA2RUR9 1427 aa28.2■■■□□ 2.11
PTP4A2-212ENST00000529477 PHLPP1O60346 1717 aa28.2■■■□□ 2.1
PTP4A2-212ENST00000529477 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
PTP4A2-212ENST00000529477 PROSER2Q86WR7 435 aaPredicted RBP28.18■■■□□ 2.1
PTP4A2-212ENST00000529477 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
PTP4A2-212ENST00000529477 DIP2AQ14689 1571 aa28.18■■■□□ 2.1
PTP4A2-212ENST00000529477 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
PTP4A2-212ENST00000529477 HRCP23327 699 aa28.17■■■□□ 2.1
PTP4A2-212ENST00000529477 NEXMIFQ5QGS0 1516 aa28.14■■■□□ 2.1
PTP4A2-212ENST00000529477 MSH6P52701 1360 aa28.13■■■□□ 2.09
PTP4A2-212ENST00000529477 RBM33Q96EV2 1170 aaKnown RBP28.13■■■□□ 2.09
PTP4A2-212ENST00000529477 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
PTP4A2-212ENST00000529477 RPGRIP1LQ68CZ1 1315 aa28.13■■■□□ 2.09
PTP4A2-212ENST00000529477 ADAMTS13Q76LX8 1427 aa28.12■■■□□ 2.09
PTP4A2-212ENST00000529477 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
PTP4A2-212ENST00000529477 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
PTP4A2-212ENST00000529477 SETBP1Q9Y6X0 1596 aa28.1■■■□□ 2.09
PTP4A2-212ENST00000529477 JCADQ9P266 1359 aa28.1■■■□□ 2.09
PTP4A2-212ENST00000529477 SLAIN2Q9P270 581 aa28.07■■■□□ 2.08
PTP4A2-212ENST00000529477 PPLO60437 1756 aa28.05■■■□□ 2.08
PTP4A2-212ENST00000529477 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
PTP4A2-212ENST00000529477 NCOA3Q9Y6Q9 1424 aa28.04■■■□□ 2.08
PTP4A2-212ENST00000529477 RGL3Q3MIN7 710 aa28.04■■■□□ 2.08
PTP4A2-212ENST00000529477 LRP6O75581 1613 aa28.01■■■□□ 2.07
PTP4A2-212ENST00000529477 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
PTP4A2-212ENST00000529477 SHPRHQ149N8 1683 aa28■■■□□ 2.07
PTP4A2-212ENST00000529477 AHDC1Q5TGY3 1603 aaPredicted RBP28■■■□□ 2.07
PTP4A2-212ENST00000529477 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
PTP4A2-212ENST00000529477 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
PTP4A2-212ENST00000529477 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
PTP4A2-212ENST00000529477 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
PTP4A2-212ENST00000529477 SPATA31A6Q5VVP1 1343 aa27.95■■■□□ 2.07
PTP4A2-212ENST00000529477 METP08581 1390 aa27.94■■■□□ 2.06
PTP4A2-212ENST00000529477 IFT172Q9UG01 1749 aa27.93■■■□□ 2.06
PTP4A2-212ENST00000529477 PTPRUQ92729 1446 aa27.92■■■□□ 2.06
PTP4A2-212ENST00000529477 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
PTP4A2-212ENST00000529477 ADGRF5Q8IZF2 1346 aa27.88■■■□□ 2.05
PTP4A2-212ENST00000529477 ZNF772Q68DY9 489 aaPredicted RBP27.86■■■□□ 2.05
PTP4A2-212ENST00000529477 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
PTP4A2-212ENST00000529477 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
PTP4A2-212ENST00000529477 ATF3P18847 181 aa27.83■■■□□ 2.05
PTP4A2-212ENST00000529477 TRIM26Q12899 539 aaPredicted RBP27.83■■■□□ 2.05
PTP4A2-212ENST00000529477 UPF1Q92900 1129 aaKnown RBP eCLIP27.83■■■□□ 2.057e-10■□□□□ 8.5
PTP4A2-212ENST00000529477 DCCP43146 1447 aa27.82■■■□□ 2.04
PTP4A2-212ENST00000529477 PIK3C2GO75747 1445 aa27.81■■■□□ 2.04
PTP4A2-212ENST00000529477 MYOM2P54296 1465 aa27.81■■■□□ 2.04
PTP4A2-212ENST00000529477 CDK12Q9NYV4 1490 aaPredicted RBP27.81■■■□□ 2.04
PTP4A2-212ENST00000529477 MEX3CQ5U5Q3 659 aaKnown RBP27.8■■■□□ 2.04
PTP4A2-212ENST00000529477 NHSL1Q5SYE7 1610 aa27.79■■■□□ 2.04
PTP4A2-212ENST00000529477 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
PTP4A2-212ENST00000529477 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
PTP4A2-212ENST00000529477 BRINP3Q76B58 766 aa27.76■■■□□ 2.03
PTP4A2-212ENST00000529477 STAC3Q96MF2 364 aa27.76■■■□□ 2.03
PTP4A2-212ENST00000529477 LAMC1P11047 1609 aa27.75■■■□□ 2.03
PTP4A2-212ENST00000529477 DCAF11Q8TEB1 546 aa27.74■■■□□ 2.03
PTP4A2-212ENST00000529477 NRXN1Q9ULB1 1477 aa27.74■■■□□ 2.03
PTP4A2-212ENST00000529477 PRAG1Q86YV5 1406 aa27.74■■■□□ 2.03
PTP4A2-212ENST00000529477 ADGRL3Q9HAR2 1447 aa27.73■■■□□ 2.03
PTP4A2-212ENST00000529477 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
PTP4A2-212ENST00000529477 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
PTP4A2-212ENST00000529477 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
PTP4A2-212ENST00000529477 STK26Q9P289 416 aa27.71■■■□□ 2.03
PTP4A2-212ENST00000529477 MST1RQ04912 1400 aa27.7■■■□□ 2.03
PTP4A2-212ENST00000529477 RXRBP28702 533 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms