RNA–Protein interactions for RNA: ENST00000529402.1

CHORDC1-204, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 3

Gene CHORDC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-204ENST00000529402 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
CHORDC1-204ENST00000529402 TOM1O60784 492 aa22.49■■□□□ 1.19
CHORDC1-204ENST00000529402 CHGAP10645 457 aaKnown RBP22.49■■□□□ 1.19
CHORDC1-204ENST00000529402 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
CHORDC1-204ENST00000529402 ILDR2Q71H61 639 aa22.48■■□□□ 1.19
CHORDC1-204ENST00000529402 RBM33Q96EV2 1170 aaKnown RBP22.48■■□□□ 1.19
CHORDC1-204ENST00000529402 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
CHORDC1-204ENST00000529402 NAIPQ13075 1403 aa22.45■■□□□ 1.18
CHORDC1-204ENST00000529402 BCANQ96GW7 911 aa22.43■■□□□ 1.18
CHORDC1-204ENST00000529402 SPHKAPQ2M3C7 1700 aa22.42■■□□□ 1.18
CHORDC1-204ENST00000529402 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
CHORDC1-204ENST00000529402 PLEKHG1Q9ULL1 1385 aa22.4■■□□□ 1.18
CHORDC1-204ENST00000529402 NWD1Q149M9 1564 aa22.4■■□□□ 1.18
CHORDC1-204ENST00000529402 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
CHORDC1-204ENST00000529402 KCNA6P17658 529 aa22.39■■□□□ 1.17
CHORDC1-204ENST00000529402 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
CHORDC1-204ENST00000529402 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
CHORDC1-204ENST00000529402 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
CHORDC1-204ENST00000529402 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
CHORDC1-204ENST00000529402 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.17
CHORDC1-204ENST00000529402 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
CHORDC1-204ENST00000529402 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
CHORDC1-204ENST00000529402 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
CHORDC1-204ENST00000529402 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
CHORDC1-204ENST00000529402 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHORDC1-204ENST00000529402 TRPM2O94759 1503 aa22.28■■□□□ 1.16
CHORDC1-204ENST00000529402 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
CHORDC1-204ENST00000529402 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
CHORDC1-204ENST00000529402 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
CHORDC1-204ENST00000529402 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
CHORDC1-204ENST00000529402 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
CHORDC1-204ENST00000529402 FOXD1Q16676 465 aa22.24■■□□□ 1.15
CHORDC1-204ENST00000529402 NEXMIFQ5QGS0 1516 aa22.24■■□□□ 1.15
CHORDC1-204ENST00000529402 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
CHORDC1-204ENST00000529402 KIF1BO60333 1816 aa22.23■■□□□ 1.15
CHORDC1-204ENST00000529402 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
CHORDC1-204ENST00000529402 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
CHORDC1-204ENST00000529402 MSH6P52701 1360 aa22.2■■□□□ 1.14
CHORDC1-204ENST00000529402 SETBP1Q9Y6X0 1596 aa22.2■■□□□ 1.14
CHORDC1-204ENST00000529402 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
CHORDC1-204ENST00000529402 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
CHORDC1-204ENST00000529402 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
CHORDC1-204ENST00000529402 METP08581 1390 aa22.17■■□□□ 1.14
CHORDC1-204ENST00000529402 PIK3R4Q99570 1358 aa22.15■■□□□ 1.14
CHORDC1-204ENST00000529402 SOCS7O14512 581 aa22.14■■□□□ 1.13
CHORDC1-204ENST00000529402 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
CHORDC1-204ENST00000529402 SLAIN2Q9P270 581 aa22.14■■□□□ 1.13
CHORDC1-204ENST00000529402 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
CHORDC1-204ENST00000529402 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
CHORDC1-204ENST00000529402 PPLO60437 1756 aa22.1■■□□□ 1.13
CHORDC1-204ENST00000529402 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.13
CHORDC1-204ENST00000529402 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
CHORDC1-204ENST00000529402 MPHOSPH9Q99550 1183 aa22.07■■□□□ 1.12
CHORDC1-204ENST00000529402 RGS17Q9UGC6 210 aaPredicted RBP22.06■■□□□ 1.12
CHORDC1-204ENST00000529402 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
CHORDC1-204ENST00000529402 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
CHORDC1-204ENST00000529402 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
CHORDC1-204ENST00000529402 ATF3P18847 181 aa22.03■■□□□ 1.12
CHORDC1-204ENST00000529402 RGL3Q3MIN7 710 aa22.02■■□□□ 1.12
CHORDC1-204ENST00000529402 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
CHORDC1-204ENST00000529402 CADPS2Q86UW7 1296 aa22.01■■□□□ 1.11
CHORDC1-204ENST00000529402 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
CHORDC1-204ENST00000529402 CCDC144AA2RUR9 1427 aa22■■□□□ 1.11
CHORDC1-204ENST00000529402 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
CHORDC1-204ENST00000529402 IFT172Q9UG01 1749 aa22■■□□□ 1.11
CHORDC1-204ENST00000529402 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
CHORDC1-204ENST00000529402 MST1RQ04912 1400 aa21.99■■□□□ 1.11
CHORDC1-204ENST00000529402 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
CHORDC1-204ENST00000529402 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
CHORDC1-204ENST00000529402 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
CHORDC1-204ENST00000529402 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
CHORDC1-204ENST00000529402 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
CHORDC1-204ENST00000529402 RPGRIP1LQ68CZ1 1315 aa21.98■■□□□ 1.11
CHORDC1-204ENST00000529402 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
CHORDC1-204ENST00000529402 DDX17Q92841 729 aaKnown RBP21.96■■□□□ 1.11
CHORDC1-204ENST00000529402 DCCP43146 1447 aa21.96■■□□□ 1.11
CHORDC1-204ENST00000529402 JCADQ9P266 1359 aa21.95■■□□□ 1.1
CHORDC1-204ENST00000529402 LRP6O75581 1613 aa21.95■■□□□ 1.1
CHORDC1-204ENST00000529402 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
CHORDC1-204ENST00000529402 POTEAQ6S8J7 498 aa21.93■■□□□ 1.1
CHORDC1-204ENST00000529402 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
CHORDC1-204ENST00000529402 SHPRHQ149N8 1683 aa21.89■■□□□ 1.1
CHORDC1-204ENST00000529402 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
CHORDC1-204ENST00000529402 STK26Q9P289 416 aa21.88■■□□□ 1.09
CHORDC1-204ENST00000529402 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
CHORDC1-204ENST00000529402 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
CHORDC1-204ENST00000529402 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
CHORDC1-204ENST00000529402 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
CHORDC1-204ENST00000529402 ANKRD30BQ9BXX2 1392 aa21.85■■□□□ 1.09
CHORDC1-204ENST00000529402 PLEKHH1Q9ULM0 1364 aa21.85■■□□□ 1.09
CHORDC1-204ENST00000529402 WAPLQ7Z5K2 1190 aa21.84■■□□□ 1.09
CHORDC1-204ENST00000529402 NUTM2BA6NNL0 878 aaPredicted RBP21.83■■□□□ 1.09
CHORDC1-204ENST00000529402 NUTM2EB1AL46 878 aaPredicted RBP21.83■■□□□ 1.09
CHORDC1-204ENST00000529402 NUTM2AQ8IVF1 878 aaPredicted RBP21.83■■□□□ 1.09
CHORDC1-204ENST00000529402 KNDC1Q76NI1 1749 aa21.81■■□□□ 1.08
CHORDC1-204ENST00000529402 LRPPRCP42704 1394 aaKnown RBP21.81■■□□□ 1.08
CHORDC1-204ENST00000529402 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
CHORDC1-204ENST00000529402 TECPR2O15040 1411 aa21.8■■□□□ 1.08
CHORDC1-204ENST00000529402 NRXN1Q9ULB1 1477 aa21.79■■□□□ 1.08
CHORDC1-204ENST00000529402 NUTM2FA1L443 756 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms