RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 YTHDC1Q96MU7 727 aaKnown RBP32.45■■■□□ 2.79
LTBP3-212ENST00000529189 PPLO60437 1756 aa32.45■■■□□ 2.79
LTBP3-212ENST00000529189 WASHC2AQ641Q2 1341 aa32.44■■■□□ 2.78
LTBP3-212ENST00000529189 MYOM2P54296 1465 aa32.43■■■□□ 2.78
LTBP3-212ENST00000529189 STAG3Q9UJ98 1225 aa32.43■■■□□ 2.78
LTBP3-212ENST00000529189 NEXMIFQ5QGS0 1516 aa32.42■■■□□ 2.78
LTBP3-212ENST00000529189 A2ML1A8K2U0 1454 aa32.41■■■□□ 2.78
LTBP3-212ENST00000529189 NLRP1Q9C000 1473 aa32.4■■■□□ 2.78
LTBP3-212ENST00000529189 USP47Q96K76 1375 aa32.4■■■□□ 2.78
LTBP3-212ENST00000529189 RPGRIP1LQ68CZ1 1315 aa32.39■■■□□ 2.78
LTBP3-212ENST00000529189 TRPM1Q7Z4N2 1603 aa32.39■■■□□ 2.78
LTBP3-212ENST00000529189 STAC3Q96MF2 364 aa32.38■■■□□ 2.77
LTBP3-212ENST00000529189 MYO3AQ8NEV4 1616 aa32.37■■■□□ 2.77
LTBP3-212ENST00000529189 CCDC7Q96M83 1385 aa32.37■■■□□ 2.77
LTBP3-212ENST00000529189 PTPRMP28827 1452 aa32.37■■■□□ 2.77
LTBP3-212ENST00000529189 UBR1Q8IWV7 1749 aa32.36■■■□□ 2.77
LTBP3-212ENST00000529189 ADGRF5Q8IZF2 1346 aa32.35■■■□□ 2.77
LTBP3-212ENST00000529189 SCAF1Q9H7N4 1312 aaKnown RBP32.35■■■□□ 2.77
LTBP3-212ENST00000529189 KDM5AP29375 1690 aaKnown RBP32.35■■■□□ 2.77
LTBP3-212ENST00000529189 ANP32CO43423 234 aa32.34■■■□□ 2.77
LTBP3-212ENST00000529189 NRXN1Q9ULB1 1477 aa32.33■■■□□ 2.77
LTBP3-212ENST00000529189 NUTM2DQ5VT03 806 aaPredicted RBP32.32■■■□□ 2.77
LTBP3-212ENST00000529189 CARD11Q9BXL7 1154 aa32.32■■■□□ 2.76
LTBP3-212ENST00000529189 C11orf95C9JLR9 678 aaPredicted RBP32.3■■■□□ 2.76
LTBP3-212ENST00000529189 ROCK2O75116 1388 aaKnown RBP32.29■■■□□ 2.76
LTBP3-212ENST00000529189 PIK3C2GO75747 1445 aa32.27■■■□□ 2.76
LTBP3-212ENST00000529189 RIMS2Q9UQ26 1411 aa32.27■■■□□ 2.76
LTBP3-212ENST00000529189 LAMC1P11047 1609 aa32.26■■■□□ 2.75
LTBP3-212ENST00000529189 VGFO15240 615 aaPredicted RBP32.25■■■□□ 2.75
LTBP3-212ENST00000529189 NBPF1Q3BBV0 1214 aa32.25■■■□□ 2.75
LTBP3-212ENST00000529189 ZFYVE9O95405 1425 aa32.25■■■□□ 2.75
LTBP3-212ENST00000529189 KIF7Q2M1P5 1343 aa32.25■■■□□ 2.75
LTBP3-212ENST00000529189 CEP170BQ9Y4F5 1589 aaPredicted RBP32.24■■■□□ 2.75
LTBP3-212ENST00000529189 KIAA1210Q9ULL0 1709 aa32.24■■■□□ 2.75
LTBP3-212ENST00000529189 CCER2I3L3R5 266 aa32.21■■■□□ 2.75
LTBP3-212ENST00000529189 GPRASP1Q5JY77 1395 aa32.21■■■□□ 2.75
LTBP3-212ENST00000529189 TMEM2Q9UHN6 1383 aa32.21■■■□□ 2.75
LTBP3-212ENST00000529189 ZNF142P52746 1687 aaPredicted RBP32.2■■■□□ 2.75
LTBP3-212ENST00000529189 KDM4FA0A1W2PPD8 638 aa32.2■■■□□ 2.75
LTBP3-212ENST00000529189 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
LTBP3-212ENST00000529189 SETD1BQ9UPS6 1966 aaKnown RBP32.19■■■□□ 2.74
LTBP3-212ENST00000529189 SENP3Q9H4L4 574 aaPredicted RBP32.16■■■□□ 2.74
LTBP3-212ENST00000529189 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.14■■■□□ 2.74
LTBP3-212ENST00000529189 SLIT1O75093 1534 aa32.13■■■□□ 2.73
LTBP3-212ENST00000529189 C14orf93Q9H972 538 aaKnown RBP32.12■■■□□ 2.73
LTBP3-212ENST00000529189 ARHGAP23Q9P227 1491 aa32.12■■■□□ 2.73
LTBP3-212ENST00000529189 THEMISQ8N1K5 641 aaPredicted RBP32.12■■■□□ 2.73
LTBP3-212ENST00000529189 ST20-MTHFSA0A0A6YYL1 179 aa32.1■■■□□ 2.73
LTBP3-212ENST00000529189 SETBP1Q9Y6X0 1596 aa32.1■■■□□ 2.73
LTBP3-212ENST00000529189 HDGFP51858 240 aaKnown RBP32.09■■■□□ 2.73
LTBP3-212ENST00000529189 IQGAP1P46940 1657 aa32.08■■■□□ 2.73
LTBP3-212ENST00000529189 ADGRB1O14514 1584 aa32.07■■■□□ 2.72
LTBP3-212ENST00000529189 LTKP29376 864 aa32.06■■■□□ 2.72
LTBP3-212ENST00000529189 NRXN3Q9Y4C0 1643 aa32.06■■■□□ 2.72
LTBP3-212ENST00000529189 ALKQ9UM73 1620 aa32.05■■■□□ 2.72
LTBP3-212ENST00000529189 TXNDC2Q86VQ3 553 aa32.04■■■□□ 2.72
LTBP3-212ENST00000529189 SCAF11Q99590 1463 aaKnown RBP32.04■■■□□ 2.72
LTBP3-212ENST00000529189 ASXL1Q8IXJ9 1541 aa32.03■■■□□ 2.72
LTBP3-212ENST00000529189 EID1Q9Y6B2 187 aa32.03■■■□□ 2.72
LTBP3-212ENST00000529189 TMEM132EQ6IEE7 984 aa32.02■■■□□ 2.72
LTBP3-212ENST00000529189 SETD1AO15047 1707 aaKnown RBP32■■■□□ 2.71
LTBP3-212ENST00000529189 PLEKHG1Q9ULL1 1385 aa31.99■■■□□ 2.71
LTBP3-212ENST00000529189 POLR3GLQ9BT43 218 aa31.99■■■□□ 2.71
LTBP3-212ENST00000529189 GTF3C3Q9Y5Q9 886 aa31.98■■■□□ 2.71
LTBP3-212ENST00000529189 BCANQ96GW7 911 aa31.96■■■□□ 2.71
LTBP3-212ENST00000529189 EIF3AQ14152 1382 aaKnown RBP31.92■■■□□ 2.7
LTBP3-212ENST00000529189 ADAMTS13Q76LX8 1427 aa31.92■■■□□ 2.7
LTBP3-212ENST00000529189 PRKRIP1Q9H875 184 aaPredicted RBP31.92■■■□□ 2.7
LTBP3-212ENST00000529189 TRAK1Q9UPV9 953 aa31.9■■■□□ 2.7
LTBP3-212ENST00000529189 ANKLE2Q86XL3 938 aa31.88■■■□□ 2.69
LTBP3-212ENST00000529189 YTHDC2Q9H6S0 1430 aaKnown RBP31.88■■■□□ 2.69
LTBP3-212ENST00000529189 METP08581 1390 aa31.88■■■□□ 2.69
LTBP3-212ENST00000529189 ARHGEF28Q8N1W1 1705 aaKnown RBP31.87■■■□□ 2.69
LTBP3-212ENST00000529189 TESK2Q96S53 571 aa31.87■■■□□ 2.69
LTBP3-212ENST00000529189 STK26Q9P289 416 aa31.86■■■□□ 2.69
LTBP3-212ENST00000529189 MED14O60244 1454 aa31.85■■■□□ 2.69
LTBP3-212ENST00000529189 SLC26A8Q96RN1 970 aa31.84■■■□□ 2.69
LTBP3-212ENST00000529189 DIP2AQ14689 1571 aa31.82■■■□□ 2.68
LTBP3-212ENST00000529189 LMTK3Q96Q04 1460 aa31.81■■■□□ 2.68
LTBP3-212ENST00000529189 LRPPRCP42704 1394 aaKnown RBP31.8■■■□□ 2.68
LTBP3-212ENST00000529189 DISP3Q9P2K9 1392 aa31.8■■■□□ 2.68
LTBP3-212ENST00000529189 QRICH2Q9H0J4 1663 aa31.79■■■□□ 2.68
LTBP3-212ENST00000529189 TMF1P82094 1093 aa31.79■■■□□ 2.68
LTBP3-212ENST00000529189 CENPJQ9HC77 1338 aaPredicted RBP31.79■■■□□ 2.68
LTBP3-212ENST00000529189 NCKAP5LQ9HCH0 1330 aa31.77■■■□□ 2.68
LTBP3-212ENST00000529189 HSPA2P54652 639 aa31.76■■■□□ 2.68
LTBP3-212ENST00000529189 TBX22Q9Y458 520 aa31.76■■■□□ 2.68
LTBP3-212ENST00000529189 NPHP4O75161 1426 aaPredicted RBP31.76■■■□□ 2.67
LTBP3-212ENST00000529189 KNDC1Q76NI1 1749 aa31.75■■■□□ 2.67
LTBP3-212ENST00000529189 DLC1Q96QB1 1528 aa31.74■■■□□ 2.67
LTBP3-212ENST00000529189 ABCC11Q96J66 1382 aa31.73■■■□□ 2.67
LTBP3-212ENST00000529189 PTPRUQ92729 1446 aa31.71■■■□□ 2.67
LTBP3-212ENST00000529189 SBNO2Q9Y2G9 1366 aa31.71■■■□□ 2.67
LTBP3-212ENST00000529189 PRAM1Q96QH2 718 aa31.7■■■□□ 2.67
LTBP3-212ENST00000529189 TECPR2O15040 1411 aa31.7■■■□□ 2.67
LTBP3-212ENST00000529189 CPS1P31327 1500 aa31.69■■■□□ 2.66
LTBP3-212ENST00000529189 SAFB2Q14151 953 aaKnown RBP eCLIP31.69■■■□□ 2.66
LTBP3-212ENST00000529189 CCDC184Q52MB2 194 aa31.68■■■□□ 2.66
LTBP3-212ENST00000529189 MRS2Q9HD23 443 aa31.67■■■□□ 2.66
LTBP3-212ENST00000529189 POGKQ9P215 609 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms