RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 SLC52A1Q9NWF4 448 aa19.43■□□□□ 0.7
TRIM3-207ENST00000528932 RGS17Q9UGC6 210 aaPredicted RBP19.43■□□□□ 0.7
TRIM3-207ENST00000528932 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
TRIM3-207ENST00000528932 NWD1Q149M9 1564 aa19.42■□□□□ 0.7
TRIM3-207ENST00000528932 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-207ENST00000528932 CHGAP10645 457 aaKnown RBP19.41■□□□□ 0.7
TRIM3-207ENST00000528932 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
TRIM3-207ENST00000528932 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
TRIM3-207ENST00000528932 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
TRIM3-207ENST00000528932 NKTRP30414 1462 aaKnown RBP19.4■□□□□ 0.7
TRIM3-207ENST00000528932 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
TRIM3-207ENST00000528932 NUTM2DQ5VT03 806 aaPredicted RBP19.39■□□□□ 0.69
TRIM3-207ENST00000528932 ZFYVE9O95405 1425 aa19.39■□□□□ 0.69
TRIM3-207ENST00000528932 E9PCH4 1651 aa19.39■□□□□ 0.69
TRIM3-207ENST00000528932 UNC13BO14795 1591 aa19.38■□□□□ 0.69
TRIM3-207ENST00000528932 MSH6P52701 1360 aa19.38■□□□□ 0.69
TRIM3-207ENST00000528932 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
TRIM3-207ENST00000528932 PLEKHG1Q9ULL1 1385 aa19.36■□□□□ 0.69
TRIM3-207ENST00000528932 ITGAEP38570 1179 aa19.34■□□□□ 0.69
TRIM3-207ENST00000528932 SLAIN2Q9P270 581 aa19.33■□□□□ 0.68
TRIM3-207ENST00000528932 HDGFP51858 240 aaKnown RBP19.32■□□□□ 0.68
TRIM3-207ENST00000528932 POTEAQ6S8J7 498 aa19.32■□□□□ 0.68
TRIM3-207ENST00000528932 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
TRIM3-207ENST00000528932 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
TRIM3-207ENST00000528932 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
TRIM3-207ENST00000528932 ADAMTS13Q76LX8 1427 aa19.28■□□□□ 0.68
TRIM3-207ENST00000528932 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRIM3-207ENST00000528932 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
TRIM3-207ENST00000528932 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
TRIM3-207ENST00000528932 NUP155O75694 1391 aa19.27■□□□□ 0.68
TRIM3-207ENST00000528932 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
TRIM3-207ENST00000528932 SETD1AO15047 1707 aaKnown RBP19.26■□□□□ 0.67
TRIM3-207ENST00000528932 COL16A1Q07092 1604 aaPredicted RBP19.25■□□□□ 0.67
TRIM3-207ENST00000528932 DIP2AQ14689 1571 aa19.24■□□□□ 0.67
TRIM3-207ENST00000528932 JCADQ9P266 1359 aa19.24■□□□□ 0.67
TRIM3-207ENST00000528932 TRPM2O94759 1503 aa19.21■□□□□ 0.67
TRIM3-207ENST00000528932 ATF3P18847 181 aa19.21■□□□□ 0.67
TRIM3-207ENST00000528932 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
TRIM3-207ENST00000528932 PTPRUQ92729 1446 aa19.21■□□□□ 0.67
TRIM3-207ENST00000528932 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
TRIM3-207ENST00000528932 NCOA3Q9Y6Q9 1424 aa19.19■□□□□ 0.66
TRIM3-207ENST00000528932 LRP6O75581 1613 aa19.19■□□□□ 0.66
TRIM3-207ENST00000528932 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
TRIM3-207ENST00000528932 C19orf44Q9H6X5 657 aa19.19■□□□□ 0.66
TRIM3-207ENST00000528932 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
TRIM3-207ENST00000528932 ZNF326Q5BKZ1 582 aaKnown RBP19.18■□□□□ 0.66
TRIM3-207ENST00000528932 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
TRIM3-207ENST00000528932 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
TRIM3-207ENST00000528932 AHDC1Q5TGY3 1603 aaPredicted RBP19.16■□□□□ 0.66
TRIM3-207ENST00000528932 SHPRHQ149N8 1683 aa19.14■□□□□ 0.66
TRIM3-207ENST00000528932 XRN1Q8IZH2 1706 aaKnown RBP19.14■□□□□ 0.66
TRIM3-207ENST00000528932 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-207ENST00000528932 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-207ENST00000528932 BRINP3Q76B58 766 aa19.13■□□□□ 0.65
TRIM3-207ENST00000528932 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-207ENST00000528932 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
TRIM3-207ENST00000528932 CLTCL1P53675 1640 aa19.12■□□□□ 0.65
TRIM3-207ENST00000528932 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
TRIM3-207ENST00000528932 METP08581 1390 aa19.11■□□□□ 0.65
TRIM3-207ENST00000528932 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
TRIM3-207ENST00000528932 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
TRIM3-207ENST00000528932 KIF1BO60333 1816 aa19.09■□□□□ 0.65
TRIM3-207ENST00000528932 NEXMIFQ5QGS0 1516 aa19.08■□□□□ 0.64
TRIM3-207ENST00000528932 ZNF772Q68DY9 489 aaPredicted RBP19.07■□□□□ 0.64
TRIM3-207ENST00000528932 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
TRIM3-207ENST00000528932 NALCNQ8IZF0 1738 aa19.07■□□□□ 0.64
TRIM3-207ENST00000528932 MST1RQ04912 1400 aa19.07■□□□□ 0.64
TRIM3-207ENST00000528932 NHSL1Q5SYE7 1610 aa19.06■□□□□ 0.64
TRIM3-207ENST00000528932 DCCP43146 1447 aa19.06■□□□□ 0.64
TRIM3-207ENST00000528932 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
TRIM3-207ENST00000528932 NAIPQ13075 1403 aa19.01■□□□□ 0.63
TRIM3-207ENST00000528932 AFF2P51816 1311 aa19■□□□□ 0.63
TRIM3-207ENST00000528932 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
TRIM3-207ENST00000528932 RXRBP28702 533 aa19■□□□□ 0.63
TRIM3-207ENST00000528932 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
TRIM3-207ENST00000528932 UPF1Q92900 1129 aaKnown RBP eCLIP18.98■□□□□ 0.63
TRIM3-207ENST00000528932 LRRC59Q96AG4 307 aaKnown RBP18.98■□□□□ 0.63
TRIM3-207ENST00000528932 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
TRIM3-207ENST00000528932 C1orf167Q5SNV9 1468 aa18.96■□□□□ 0.63
TRIM3-207ENST00000528932 PNPLA6Q8IY17 1366 aa18.95■□□□□ 0.62
TRIM3-207ENST00000528932 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
TRIM3-207ENST00000528932 PPLO60437 1756 aa18.94■□□□□ 0.62
TRIM3-207ENST00000528932 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
TRIM3-207ENST00000528932 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
TRIM3-207ENST00000528932 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
TRIM3-207ENST00000528932 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
TRIM3-207ENST00000528932 FOXD1Q16676 465 aa18.92■□□□□ 0.62
TRIM3-207ENST00000528932 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
TRIM3-207ENST00000528932 QTRT2Q9H974 415 aaKnown RBP18.9■□□□□ 0.62
TRIM3-207ENST00000528932 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
TRIM3-207ENST00000528932 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
TRIM3-207ENST00000528932 RGS12O14924 1447 aa18.89■□□□□ 0.61
TRIM3-207ENST00000528932 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
TRIM3-207ENST00000528932 LAMC1P11047 1609 aa18.88■□□□□ 0.61
TRIM3-207ENST00000528932 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
TRIM3-207ENST00000528932 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
TRIM3-207ENST00000528932 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
TRIM3-207ENST00000528932 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
TRIM3-207ENST00000528932 STK26Q9P289 416 aa18.84■□□□□ 0.61
TRIM3-207ENST00000528932 ADGRF5Q8IZF2 1346 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms