RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 OSCARQ8IYS5 282 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 NCOA2Q15596 1464 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 RUNDC1Q96C34 613 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
CTNND1-219ENST00000528621 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 GOLGA6L1Q8N7Z2 621 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 HECW1Q76N89 1606 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 CREBRFQ8IUR6 639 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 TEFQ10587 303 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
CTNND1-219ENST00000528621 DDX58O95786 925 aaKnown RBP10.43□□□□□ -0.74
CTNND1-219ENST00000528621 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-219ENST00000528621 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-219ENST00000528621 REC8O95072 547 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 TPM2P07951 284 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 AKAP17AQ02040 695 aaKnown RBP10.42□□□□□ -0.74
CTNND1-219ENST00000528621 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
CTNND1-219ENST00000528621 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 TPM3P06753 285 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 AEBP2Q6ZN18 517 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-219ENST00000528621 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-219ENST00000528621 CCDC7Q96M83 1385 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 PLIN1O60240 522 aa10.42□□□□□ -0.74
CTNND1-219ENST00000528621 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
CTNND1-219ENST00000528621 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
CTNND1-219ENST00000528621 HSP90AB4PQ58FF6 505 aa10.41□□□□□ -0.74
CTNND1-219ENST00000528621 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
CTNND1-219ENST00000528621 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-219ENST00000528621 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
CTNND1-219ENST00000528621 ELL2O00472 640 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-219ENST00000528621 PDE4AP27815 886 aa10.41□□□□□ -0.74
CTNND1-219ENST00000528621 GNAI1P63096 354 aa10.4□□□□□ -0.74
CTNND1-219ENST00000528621 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.74
CTNND1-219ENST00000528621 RIPK4P57078 832 aa10.4□□□□□ -0.74
CTNND1-219ENST00000528621 C9orf78Q9NZ63 289 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-219ENST00000528621 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
CTNND1-219ENST00000528621 BRD4O60885 1362 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-219ENST00000528621 WWC1Q8IX03 1113 aa10.4□□□□□ -0.74
CTNND1-219ENST00000528621 MRC2Q9UBG0 1479 aa10.4□□□□□ -0.75
CTNND1-219ENST00000528621 PSME1Q06323 249 aa10.4□□□□□ -0.75
CTNND1-219ENST00000528621 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.75
CTNND1-219ENST00000528621 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.75
CTNND1-219ENST00000528621 IFT140Q96RY7 1462 aa10.39□□□□□ -0.75
CTNND1-219ENST00000528621 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
CTNND1-219ENST00000528621 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
CTNND1-219ENST00000528621 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
CTNND1-219ENST00000528621 RNF20Q5VTR2 975 aa10.39□□□□□ -0.75
CTNND1-219ENST00000528621 CPLX2Q6PUV4 134 aaKnown RBP10.39□□□□□ -0.75
CTNND1-219ENST00000528621 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 ZKSCAN1P17029 563 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-219ENST00000528621 APAF1O14727 1248 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
CTNND1-219ENST00000528621 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
CTNND1-219ENST00000528621 TOP2BQ02880 1626 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 TPM1P09493 284 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
CTNND1-219ENST00000528621 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
CTNND1-219ENST00000528621 HOOK1Q9UJC3 728 aaKnown RBP10.37□□□□□ -0.75
CTNND1-219ENST00000528621 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
CTNND1-219ENST00000528621 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
CTNND1-219ENST00000528621 CCDC47Q96A33 483 aaKnown RBP10.37□□□□□ -0.75
CTNND1-219ENST00000528621 ERC2O15083 957 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 PES1O00541 588 aaKnown RBP10.36□□□□□ -0.75
CTNND1-219ENST00000528621 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.758e-9■□□□□ 11.1
CTNND1-219ENST00000528621 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 ARID3AQ99856 593 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 CFTRP13569 1480 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 MCTP1Q6DN14 999 aa10.36□□□□□ -0.75
CTNND1-219ENST00000528621 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
CTNND1-219ENST00000528621 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 MSH5O43196 834 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-219ENST00000528621 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 NINLQ9Y2I6 1382 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.752e-9■■■□□ 18.1
CTNND1-219ENST00000528621 KIF7Q2M1P5 1343 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
CTNND1-219ENST00000528621 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 CCDC70Q6NSX1 233 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-219ENST00000528621 PDE4CQ08493 712 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 BECN2A8MW95 431 aa10.34□□□□□ -0.75
CTNND1-219ENST00000528621 FKBP5Q13451 457 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-219ENST00000528621 ERICH2A1L162 156 aa10.33□□□□□ -0.76
CTNND1-219ENST00000528621 SYNJ1O43426 1573 aa10.33□□□□□ -0.76
CTNND1-219ENST00000528621 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
CTNND1-219ENST00000528621 APPP05067 770 aa10.33□□□□□ -0.76
CTNND1-219ENST00000528621 NUCB2P80303 420 aa10.33□□□□□ -0.76
CTNND1-219ENST00000528621 CHMP5Q9NZZ3 219 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms