RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
EXOSC4-203ENST00000527954 KCNA6P17658 529 aa23.08■■□□□ 1.29
EXOSC4-203ENST00000527954 ZFYVE9O95405 1425 aa23.08■■□□□ 1.28
EXOSC4-203ENST00000527954 RIMS2Q9UQ26 1411 aa23.08■■□□□ 1.28
EXOSC4-203ENST00000527954 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
EXOSC4-203ENST00000527954 TMEM131LA2VDJ0 1609 aa23.07■■□□□ 1.28
EXOSC4-203ENST00000527954 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
EXOSC4-203ENST00000527954 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
EXOSC4-203ENST00000527954 PROSER2Q86WR7 435 aaPredicted RBP23.04■■□□□ 1.28
EXOSC4-203ENST00000527954 TMEM94Q12767 1356 aa23.03■■□□□ 1.28
EXOSC4-203ENST00000527954 PLEKHG1Q9ULL1 1385 aa23.03■■□□□ 1.28
EXOSC4-203ENST00000527954 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
EXOSC4-203ENST00000527954 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
EXOSC4-203ENST00000527954 XIRP1Q702N8 1843 aaKnown RBP23.02■■□□□ 1.28
EXOSC4-203ENST00000527954 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.01■■□□□ 1.27
EXOSC4-203ENST00000527954 NAIPQ13075 1403 aa22.99■■□□□ 1.27
EXOSC4-203ENST00000527954 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
EXOSC4-203ENST00000527954 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
EXOSC4-203ENST00000527954 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
EXOSC4-203ENST00000527954 MED1Q15648 1581 aaPredicted RBP22.93■■□□□ 1.26
EXOSC4-203ENST00000527954 ADAMTS13Q76LX8 1427 aa22.92■■□□□ 1.26
EXOSC4-203ENST00000527954 SOCS7O14512 581 aa22.91■■□□□ 1.26
EXOSC4-203ENST00000527954 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
EXOSC4-203ENST00000527954 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
EXOSC4-203ENST00000527954 FAM135BQ49AJ0 1406 aa22.9■■□□□ 1.26
EXOSC4-203ENST00000527954 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
EXOSC4-203ENST00000527954 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
EXOSC4-203ENST00000527954 MSH6P52701 1360 aa22.89■■□□□ 1.25
EXOSC4-203ENST00000527954 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
EXOSC4-203ENST00000527954 DIP2AQ14689 1571 aa22.85■■□□□ 1.25
EXOSC4-203ENST00000527954 PIK3R4Q99570 1358 aa22.85■■□□□ 1.25
EXOSC4-203ENST00000527954 SLAIN2Q9P270 581 aa22.84■■□□□ 1.25
EXOSC4-203ENST00000527954 CLTCL1P53675 1640 aa22.83■■□□□ 1.25
EXOSC4-203ENST00000527954 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
EXOSC4-203ENST00000527954 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
EXOSC4-203ENST00000527954 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.25
EXOSC4-203ENST00000527954 TRPM2O94759 1503 aa22.82■■□□□ 1.24
EXOSC4-203ENST00000527954 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
EXOSC4-203ENST00000527954 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
EXOSC4-203ENST00000527954 PTPRUQ92729 1446 aa22.81■■□□□ 1.24
EXOSC4-203ENST00000527954 NCOA3Q9Y6Q9 1424 aa22.8■■□□□ 1.24
EXOSC4-203ENST00000527954 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
EXOSC4-203ENST00000527954 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
EXOSC4-203ENST00000527954 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
EXOSC4-203ENST00000527954 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
EXOSC4-203ENST00000527954 METP08581 1390 aa22.75■■□□□ 1.23
EXOSC4-203ENST00000527954 ATF3P18847 181 aa22.73■■□□□ 1.23
EXOSC4-203ENST00000527954 FOXD1Q16676 465 aa22.73■■□□□ 1.23
EXOSC4-203ENST00000527954 CADPS2Q86UW7 1296 aa22.73■■□□□ 1.23
EXOSC4-203ENST00000527954 KIF1BO60333 1816 aa22.73■■□□□ 1.23
EXOSC4-203ENST00000527954 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.71■■□□□ 1.23
EXOSC4-203ENST00000527954 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
EXOSC4-203ENST00000527954 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
EXOSC4-203ENST00000527954 RPGRIP1LQ68CZ1 1315 aa22.67■■□□□ 1.22
EXOSC4-203ENST00000527954 RGS17Q9UGC6 210 aaPredicted RBP22.67■■□□□ 1.22
EXOSC4-203ENST00000527954 PHLPP1O60346 1717 aa22.67■■□□□ 1.22
EXOSC4-203ENST00000527954 MPHOSPH9Q99550 1183 aa22.66■■□□□ 1.22
EXOSC4-203ENST00000527954 JCADQ9P266 1359 aa22.63■■□□□ 1.21
EXOSC4-203ENST00000527954 BRINP3Q76B58 766 aa22.62■■□□□ 1.21
EXOSC4-203ENST00000527954 DCCP43146 1447 aa22.62■■□□□ 1.21
EXOSC4-203ENST00000527954 COL16A1Q07092 1604 aaPredicted RBP22.61■■□□□ 1.21
EXOSC4-203ENST00000527954 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
EXOSC4-203ENST00000527954 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
EXOSC4-203ENST00000527954 ADGRL3Q9HAR2 1447 aa22.58■■□□□ 1.21
EXOSC4-203ENST00000527954 MST1RQ04912 1400 aa22.57■■□□□ 1.2
EXOSC4-203ENST00000527954 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
EXOSC4-203ENST00000527954 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
EXOSC4-203ENST00000527954 PPLO60437 1756 aa22.57■■□□□ 1.2
EXOSC4-203ENST00000527954 ROBO2Q9HCK4 1378 aa22.56■■□□□ 1.2
EXOSC4-203ENST00000527954 SETD1AO15047 1707 aaKnown RBP22.56■■□□□ 1.2
EXOSC4-203ENST00000527954 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
EXOSC4-203ENST00000527954 POTEAQ6S8J7 498 aa22.55■■□□□ 1.2
EXOSC4-203ENST00000527954 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
EXOSC4-203ENST00000527954 ASXL1Q8IXJ9 1541 aa22.54■■□□□ 1.2
EXOSC4-203ENST00000527954 PTCH1Q13635 1447 aa22.54■■□□□ 1.2
EXOSC4-203ENST00000527954 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
EXOSC4-203ENST00000527954 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
EXOSC4-203ENST00000527954 SPATA31A6Q5VVP1 1343 aa22.52■■□□□ 1.2
EXOSC4-203ENST00000527954 DDX17Q92841 729 aaKnown RBP22.5■■□□□ 1.19
EXOSC4-203ENST00000527954 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
EXOSC4-203ENST00000527954 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
EXOSC4-203ENST00000527954 LRP6O75581 1613 aa22.49■■□□□ 1.19
EXOSC4-203ENST00000527954 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
EXOSC4-203ENST00000527954 MEX3CQ5U5Q3 659 aaKnown RBP22.48■■□□□ 1.19
EXOSC4-203ENST00000527954 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
EXOSC4-203ENST00000527954 STK26Q9P289 416 aa22.47■■□□□ 1.19
EXOSC4-203ENST00000527954 SHPRHQ149N8 1683 aa22.46■■□□□ 1.19
EXOSC4-203ENST00000527954 NUTM2BA6NNL0 878 aaPredicted RBP22.46■■□□□ 1.19
EXOSC4-203ENST00000527954 NUTM2EB1AL46 878 aaPredicted RBP22.46■■□□□ 1.19
EXOSC4-203ENST00000527954 NUTM2AQ8IVF1 878 aaPredicted RBP22.46■■□□□ 1.19
EXOSC4-203ENST00000527954 TMEM132EQ6IEE7 984 aa22.45■■□□□ 1.18
EXOSC4-203ENST00000527954 LRRC59Q96AG4 307 aaKnown RBP22.45■■□□□ 1.18
EXOSC4-203ENST00000527954 ORAI2Q96SN7 254 aa22.45■■□□□ 1.18
EXOSC4-203ENST00000527954 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
EXOSC4-203ENST00000527954 IFT172Q9UG01 1749 aa22.45■■□□□ 1.18
EXOSC4-203ENST00000527954 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
EXOSC4-203ENST00000527954 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
EXOSC4-203ENST00000527954 LRPPRCP42704 1394 aaKnown RBP22.4■■□□□ 1.18
EXOSC4-203ENST00000527954 ABCC11Q96J66 1382 aa22.38■■□□□ 1.17
EXOSC4-203ENST00000527954 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms