RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 PHF23Q9BUL5 403 aaPredicted RBP29.12■■■□□ 2.25
CAPN1-211ENST00000527739 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
CAPN1-211ENST00000527739 HDGFP51858 240 aaKnown RBP29.1■■■□□ 2.25
CAPN1-211ENST00000527739 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
CAPN1-211ENST00000527739 TMEM94Q12767 1356 aa29.07■■■□□ 2.24
CAPN1-211ENST00000527739 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
CAPN1-211ENST00000527739 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
CAPN1-211ENST00000527739 GCC2Q8IWJ2 1684 aa29.05■■■□□ 2.24
CAPN1-211ENST00000527739 KCNA6P17658 529 aa29.05■■■□□ 2.24
CAPN1-211ENST00000527739 IQGAP3Q86VI3 1631 aa29.05■■■□□ 2.24
CAPN1-211ENST00000527739 NUTM2DQ5VT03 806 aaPredicted RBP29.04■■■□□ 2.24
CAPN1-211ENST00000527739 NAIPQ13075 1403 aa29.03■■■□□ 2.24
CAPN1-211ENST00000527739 E9PCH4 1651 aa29.02■■■□□ 2.24
CAPN1-211ENST00000527739 RIMS2Q9UQ26 1411 aa29.02■■■□□ 2.24
CAPN1-211ENST00000527739 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.01■■■□□ 2.23
CAPN1-211ENST00000527739 PROSER2Q86WR7 435 aaPredicted RBP29■■■□□ 2.23
CAPN1-211ENST00000527739 FAM135BQ49AJ0 1406 aa29■■■□□ 2.23
CAPN1-211ENST00000527739 NWD1Q149M9 1564 aa28.97■■■□□ 2.23
CAPN1-211ENST00000527739 MYO5BQ9ULV0 1848 aa28.97■■■□□ 2.23
CAPN1-211ENST00000527739 RGS17Q9UGC6 210 aaPredicted RBP28.97■■■□□ 2.23
CAPN1-211ENST00000527739 ZFYVE9O95405 1425 aa28.96■■■□□ 2.23
CAPN1-211ENST00000527739 ROBO1Q9Y6N7 1651 aa28.94■■■□□ 2.22
CAPN1-211ENST00000527739 PLEKHG1Q9ULL1 1385 aa28.94■■■□□ 2.22
CAPN1-211ENST00000527739 ZNF326Q5BKZ1 582 aaKnown RBP28.94■■■□□ 2.22
CAPN1-211ENST00000527739 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
CAPN1-211ENST00000527739 NKTRP30414 1462 aaKnown RBP28.93■■■□□ 2.22
CAPN1-211ENST00000527739 HFM1A2PYH4 1435 aa28.93■■■□□ 2.22
CAPN1-211ENST00000527739 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
CAPN1-211ENST00000527739 TBX22Q9Y458 520 aa28.88■■■□□ 2.21
CAPN1-211ENST00000527739 CHD2O14647 1828 aaKnown RBP28.86■■■□□ 2.21
CAPN1-211ENST00000527739 MSH6P52701 1360 aa28.84■■■□□ 2.21
CAPN1-211ENST00000527739 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
CAPN1-211ENST00000527739 ADAMTS13Q76LX8 1427 aa28.78■■■□□ 2.2
CAPN1-211ENST00000527739 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
CAPN1-211ENST00000527739 C14orf37Q86TY3 774 aa28.78■■■□□ 2.2
CAPN1-211ENST00000527739 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
CAPN1-211ENST00000527739 FOXD1Q16676 465 aa28.77■■■□□ 2.2
CAPN1-211ENST00000527739 PHLPP1O60346 1717 aa28.75■■■□□ 2.19
CAPN1-211ENST00000527739 AMOTL2Q9Y2J4 779 aa28.73■■■□□ 2.19
CAPN1-211ENST00000527739 TRPM2O94759 1503 aa28.72■■■□□ 2.19
CAPN1-211ENST00000527739 CLTCL1P53675 1640 aa28.7■■■□□ 2.19
CAPN1-211ENST00000527739 MPHOSPH9Q99550 1183 aa28.7■■■□□ 2.18
CAPN1-211ENST00000527739 PIK3R4Q99570 1358 aa28.69■■■□□ 2.18
CAPN1-211ENST00000527739 DIP2AQ14689 1571 aa28.69■■■□□ 2.18
CAPN1-211ENST00000527739 COL16A1Q07092 1604 aaPredicted RBP28.68■■■□□ 2.18
CAPN1-211ENST00000527739 NCOA3Q9Y6Q9 1424 aa28.68■■■□□ 2.18
CAPN1-211ENST00000527739 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
CAPN1-211ENST00000527739 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.66■■■□□ 2.18
CAPN1-211ENST00000527739 JCADQ9P266 1359 aa28.66■■■□□ 2.18
CAPN1-211ENST00000527739 VGFO15240 615 aaPredicted RBP28.65■■■□□ 2.18
CAPN1-211ENST00000527739 SETD5Q9C0A6 1442 aa28.62■■■□□ 2.17
CAPN1-211ENST00000527739 ATF3P18847 181 aa28.61■■■□□ 2.17
CAPN1-211ENST00000527739 C19orf44Q9H6X5 657 aa28.61■■■□□ 2.17
CAPN1-211ENST00000527739 RPGRIP1LQ68CZ1 1315 aa28.61■■■□□ 2.17
CAPN1-211ENST00000527739 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
CAPN1-211ENST00000527739 METP08581 1390 aa28.61■■■□□ 2.17
CAPN1-211ENST00000527739 RGL3Q3MIN7 710 aa28.6■■■□□ 2.17
CAPN1-211ENST00000527739 LRP6O75581 1613 aa28.6■■■□□ 2.17
CAPN1-211ENST00000527739 CADPS2Q86UW7 1296 aa28.59■■■□□ 2.17
CAPN1-211ENST00000527739 NEXMIFQ5QGS0 1516 aa28.59■■■□□ 2.17
CAPN1-211ENST00000527739 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
CAPN1-211ENST00000527739 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
CAPN1-211ENST00000527739 SETBP1Q9Y6X0 1596 aa28.57■■■□□ 2.16
CAPN1-211ENST00000527739 KIF1BO60333 1816 aa28.57■■■□□ 2.16
CAPN1-211ENST00000527739 SETD1AO15047 1707 aaKnown RBP28.56■■■□□ 2.16
CAPN1-211ENST00000527739 AHDC1Q5TGY3 1603 aaPredicted RBP28.56■■■□□ 2.16
CAPN1-211ENST00000527739 XRN1Q8IZH2 1706 aaKnown RBP28.54■■■□□ 2.16
CAPN1-211ENST00000527739 BRINP3Q76B58 766 aa28.52■■■□□ 2.16
CAPN1-211ENST00000527739 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.16
CAPN1-211ENST00000527739 SPATA31A6Q5VVP1 1343 aa28.5■■■□□ 2.15
CAPN1-211ENST00000527739 SHPRHQ149N8 1683 aa28.49■■■□□ 2.15
CAPN1-211ENST00000527739 MEX3CQ5U5Q3 659 aaKnown RBP28.46■■■□□ 2.15
CAPN1-211ENST00000527739 DCCP43146 1447 aa28.45■■■□□ 2.15
CAPN1-211ENST00000527739 ADGRF5Q8IZF2 1346 aa28.44■■■□□ 2.14
CAPN1-211ENST00000527739 MST1RQ04912 1400 aa28.44■■■□□ 2.14
CAPN1-211ENST00000527739 ASXL1Q8IXJ9 1541 aa28.44■■■□□ 2.14
CAPN1-211ENST00000527739 NUTM2BA6NNL0 878 aaPredicted RBP28.4■■■□□ 2.14
CAPN1-211ENST00000527739 NUTM2EB1AL46 878 aaPredicted RBP28.4■■■□□ 2.14
CAPN1-211ENST00000527739 NUTM2AQ8IVF1 878 aaPredicted RBP28.4■■■□□ 2.14
CAPN1-211ENST00000527739 ANKRD30BQ9BXX2 1392 aa28.39■■■□□ 2.14
CAPN1-211ENST00000527739 SPATA31E1Q6ZUB1 1445 aa28.39■■■□□ 2.14
CAPN1-211ENST00000527739 ZNF772Q68DY9 489 aaPredicted RBP28.38■■■□□ 2.13
CAPN1-211ENST00000527739 DDX17Q92841 729 aaKnown RBP28.38■■■□□ 2.13
CAPN1-211ENST00000527739 STK26Q9P289 416 aa28.38■■■□□ 2.13
CAPN1-211ENST00000527739 NHSL1Q5SYE7 1610 aa28.38■■■□□ 2.13
CAPN1-211ENST00000527739 ADGRL3Q9HAR2 1447 aa28.37■■■□□ 2.13
CAPN1-211ENST00000527739 NALCNQ8IZF0 1738 aa28.37■■■□□ 2.13
CAPN1-211ENST00000527739 ROBO2Q9HCK4 1378 aa28.37■■■□□ 2.13
CAPN1-211ENST00000527739 PPLO60437 1756 aa28.34■■■□□ 2.13
CAPN1-211ENST00000527739 TMEM132EQ6IEE7 984 aa28.33■■■□□ 2.13
CAPN1-211ENST00000527739 PTCH1Q13635 1447 aa28.31■■■□□ 2.12
CAPN1-211ENST00000527739 HRCP23327 699 aa28.29■■■□□ 2.12
CAPN1-211ENST00000527739 AFF2P51816 1311 aa28.28■■■□□ 2.12
CAPN1-211ENST00000527739 LRRC59Q96AG4 307 aaKnown RBP28.28■■■□□ 2.12
CAPN1-211ENST00000527739 RXRBP28702 533 aa28.27■■■□□ 2.12
CAPN1-211ENST00000527739 UPF1Q92900 1129 aaKnown RBP eCLIP28.27■■■□□ 2.12
CAPN1-211ENST00000527739 PNPLA6Q8IY17 1366 aa28.26■■■□□ 2.12
CAPN1-211ENST00000527739 WAPLQ7Z5K2 1190 aa28.26■■■□□ 2.11
CAPN1-211ENST00000527739 C1orf167Q5SNV9 1468 aa28.26■■■□□ 2.11
CAPN1-211ENST00000527739 CFAP70Q5T0N1 1121 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms