RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 EID1Q9Y6B2 187 aa25.97■■□□□ 1.75
LTBP3-208ENST00000527339 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
LTBP3-208ENST00000527339 RBM33Q96EV2 1170 aaKnown RBP25.95■■□□□ 1.74
LTBP3-208ENST00000527339 TRIM52Q96A61 297 aa25.94■■□□□ 1.74
LTBP3-208ENST00000527339 SETD5Q9C0A6 1442 aa25.94■■□□□ 1.74
LTBP3-208ENST00000527339 SPHKAPQ2M3C7 1700 aa25.92■■□□□ 1.74
LTBP3-208ENST00000527339 SLC26A8Q96RN1 970 aa25.92■■□□□ 1.74
LTBP3-208ENST00000527339 SLC52A1Q9NWF4 448 aa25.92■■□□□ 1.74
LTBP3-208ENST00000527339 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
LTBP3-208ENST00000527339 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
LTBP3-208ENST00000527339 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
LTBP3-208ENST00000527339 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
LTBP3-208ENST00000527339 KCNA6P17658 529 aa25.88■■□□□ 1.73
LTBP3-208ENST00000527339 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
LTBP3-208ENST00000527339 SLC4A1APQ9BWU0 796 aaKnown RBP25.85■■□□□ 1.73
LTBP3-208ENST00000527339 RAB3GAP2Q9H2M9 1393 aa25.84■■□□□ 1.73
LTBP3-208ENST00000527339 MYO5BQ9ULV0 1848 aa25.84■■□□□ 1.73
LTBP3-208ENST00000527339 PROSER2Q86WR7 435 aaPredicted RBP25.82■■□□□ 1.72
LTBP3-208ENST00000527339 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
LTBP3-208ENST00000527339 ROBO1Q9Y6N7 1651 aa25.81■■□□□ 1.72
LTBP3-208ENST00000527339 TRPM2O94759 1503 aa25.8■■□□□ 1.72
LTBP3-208ENST00000527339 POTEAQ6S8J7 498 aa25.8■■□□□ 1.72
LTBP3-208ENST00000527339 NWD1Q149M9 1564 aa25.79■■□□□ 1.72
LTBP3-208ENST00000527339 ZFYVE9O95405 1425 aa25.77■■□□□ 1.72
LTBP3-208ENST00000527339 CLTCL1P53675 1640 aa25.75■■□□□ 1.71
LTBP3-208ENST00000527339 NKTRP30414 1462 aaKnown RBP25.75■■□□□ 1.71
LTBP3-208ENST00000527339 HRCP23327 699 aa25.75■■□□□ 1.71
LTBP3-208ENST00000527339 MPHOSPH9Q99550 1183 aa25.75■■□□□ 1.71
LTBP3-208ENST00000527339 KIF1BO60333 1816 aa25.73■■□□□ 1.71
LTBP3-208ENST00000527339 CHGAP10645 457 aaKnown RBP25.71■■□□□ 1.71
LTBP3-208ENST00000527339 BCANQ96GW7 911 aa25.71■■□□□ 1.71
LTBP3-208ENST00000527339 RIMS2Q9UQ26 1411 aa25.7■■□□□ 1.7
LTBP3-208ENST00000527339 CHD2O14647 1828 aaKnown RBP25.7■■□□□ 1.7
LTBP3-208ENST00000527339 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
LTBP3-208ENST00000527339 SLAIN2Q9P270 581 aa25.69■■□□□ 1.7
LTBP3-208ENST00000527339 MSH6P52701 1360 aa25.68■■□□□ 1.7
LTBP3-208ENST00000527339 FOXD1Q16676 465 aa25.67■■□□□ 1.7
LTBP3-208ENST00000527339 HDGFP51858 240 aaKnown RBP25.65■■□□□ 1.7
LTBP3-208ENST00000527339 NUTM2DQ5VT03 806 aaPredicted RBP25.65■■□□□ 1.7
LTBP3-208ENST00000527339 PHLPP1O60346 1717 aa25.63■■□□□ 1.69
LTBP3-208ENST00000527339 ADAMTS13Q76LX8 1427 aa25.63■■□□□ 1.69
LTBP3-208ENST00000527339 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.62■■□□□ 1.69
LTBP3-208ENST00000527339 TBX22Q9Y458 520 aa25.62■■□□□ 1.69
LTBP3-208ENST00000527339 PPP1R15AO75807 674 aaPredicted RBP25.61■■□□□ 1.69
LTBP3-208ENST00000527339 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
LTBP3-208ENST00000527339 CCDC144AA2RUR9 1427 aa25.61■■□□□ 1.69
LTBP3-208ENST00000527339 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
LTBP3-208ENST00000527339 JCADQ9P266 1359 aa25.57■■□□□ 1.68
LTBP3-208ENST00000527339 ZNF326Q5BKZ1 582 aaKnown RBP25.57■■□□□ 1.68
LTBP3-208ENST00000527339 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
LTBP3-208ENST00000527339 NEXMIFQ5QGS0 1516 aa25.56■■□□□ 1.68
LTBP3-208ENST00000527339 LRP6O75581 1613 aa25.55■■□□□ 1.68
LTBP3-208ENST00000527339 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.54■■□□□ 1.68
LTBP3-208ENST00000527339 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
LTBP3-208ENST00000527339 NCOA3Q9Y6Q9 1424 aa25.53■■□□□ 1.68
LTBP3-208ENST00000527339 PPLO60437 1756 aa25.51■■□□□ 1.67
LTBP3-208ENST00000527339 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
LTBP3-208ENST00000527339 ANKRD30BQ9BXX2 1392 aa25.5■■□□□ 1.67
LTBP3-208ENST00000527339 RPGRIP1LQ68CZ1 1315 aa25.49■■□□□ 1.67
LTBP3-208ENST00000527339 C14orf37Q86TY3 774 aa25.49■■□□□ 1.67
LTBP3-208ENST00000527339 SPATA31E1Q6ZUB1 1445 aa25.48■■□□□ 1.67
LTBP3-208ENST00000527339 C19orf44Q9H6X5 657 aa25.48■■□□□ 1.67
LTBP3-208ENST00000527339 AMOTL2Q9Y2J4 779 aa25.47■■□□□ 1.67
LTBP3-208ENST00000527339 SETBP1Q9Y6X0 1596 aa25.47■■□□□ 1.67
LTBP3-208ENST00000527339 IFT172Q9UG01 1749 aa25.46■■□□□ 1.67
LTBP3-208ENST00000527339 PIK3R4Q99570 1358 aa25.46■■□□□ 1.67
LTBP3-208ENST00000527339 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
LTBP3-208ENST00000527339 NRXN3Q9Y4C0 1643 aa25.46■■□□□ 1.67
LTBP3-208ENST00000527339 CADPS2Q86UW7 1296 aa25.45■■□□□ 1.66
LTBP3-208ENST00000527339 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
LTBP3-208ENST00000527339 VGFO15240 615 aaPredicted RBP25.43■■□□□ 1.66
LTBP3-208ENST00000527339 ATF3P18847 181 aa25.43■■□□□ 1.66
LTBP3-208ENST00000527339 SPATA31A6Q5VVP1 1343 aa25.42■■□□□ 1.66
LTBP3-208ENST00000527339 SHPRHQ149N8 1683 aa25.4■■□□□ 1.66
LTBP3-208ENST00000527339 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
LTBP3-208ENST00000527339 XRN1Q8IZH2 1706 aaKnown RBP25.38■■□□□ 1.65
LTBP3-208ENST00000527339 METP08581 1390 aa25.38■■□□□ 1.65
LTBP3-208ENST00000527339 MEX3CQ5U5Q3 659 aaKnown RBP25.36■■□□□ 1.65
LTBP3-208ENST00000527339 ASXL1Q8IXJ9 1541 aa25.34■■□□□ 1.65
LTBP3-208ENST00000527339 MST1RQ04912 1400 aa25.34■■□□□ 1.65
LTBP3-208ENST00000527339 ZNF772Q68DY9 489 aaPredicted RBP25.33■■□□□ 1.65
LTBP3-208ENST00000527339 DDX17Q92841 729 aaKnown RBP25.33■■□□□ 1.65
LTBP3-208ENST00000527339 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.65
LTBP3-208ENST00000527339 DCCP43146 1447 aa25.32■■□□□ 1.64
LTBP3-208ENST00000527339 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
LTBP3-208ENST00000527339 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
LTBP3-208ENST00000527339 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
LTBP3-208ENST00000527339 MYOM2P54296 1465 aa25.3■■□□□ 1.64
LTBP3-208ENST00000527339 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
LTBP3-208ENST00000527339 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
LTBP3-208ENST00000527339 NHSL1Q5SYE7 1610 aa25.28■■□□□ 1.64
LTBP3-208ENST00000527339 PIK3C2GO75747 1445 aa25.27■■□□□ 1.64
LTBP3-208ENST00000527339 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
LTBP3-208ENST00000527339 RXRBP28702 533 aa25.25■■□□□ 1.63
LTBP3-208ENST00000527339 AFF2P51816 1311 aa25.25■■□□□ 1.63
LTBP3-208ENST00000527339 NALCNQ8IZF0 1738 aa25.23■■□□□ 1.63
LTBP3-208ENST00000527339 LAMC1P11047 1609 aa25.23■■□□□ 1.63
LTBP3-208ENST00000527339 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
LTBP3-208ENST00000527339 SRCAPQ6ZRS2 3230 aa25.23■■□□□ 1.63
LTBP3-208ENST00000527339 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms