RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 IFT172Q9UG01 1749 aa24.44■■□□□ 1.5
SMCO4-204ENST00000527149 PPLO60437 1756 aa24.42■■□□□ 1.5
SMCO4-204ENST00000527149 IQGAP1P46940 1657 aa24.42■■□□□ 1.5
SMCO4-204ENST00000527149 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
SMCO4-204ENST00000527149 NPHP4O75161 1426 aaPredicted RBP24.39■■□□□ 1.5
SMCO4-204ENST00000527149 TXNDC2Q86VQ3 553 aa24.38■■□□□ 1.49
SMCO4-204ENST00000527149 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
SMCO4-204ENST00000527149 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
SMCO4-204ENST00000527149 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
SMCO4-204ENST00000527149 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
SMCO4-204ENST00000527149 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
SMCO4-204ENST00000527149 RPGRIP1LQ68CZ1 1315 aa24.33■■□□□ 1.48
SMCO4-204ENST00000527149 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMCO4-204ENST00000527149 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
SMCO4-204ENST00000527149 NUTM2DQ5VT03 806 aaPredicted RBP24.3■■□□□ 1.48
SMCO4-204ENST00000527149 MYOM2P54296 1465 aa24.3■■□□□ 1.48
SMCO4-204ENST00000527149 ADAMTS13Q76LX8 1427 aa24.29■■□□□ 1.48
SMCO4-204ENST00000527149 SIN3AQ96ST3 1273 aa24.29■■□□□ 1.48
SMCO4-204ENST00000527149 DMRT2Q9Y5R5 561 aa24.29■■□□□ 1.48
SMCO4-204ENST00000527149 NRXN1Q9ULB1 1477 aa24.28■■□□□ 1.48
SMCO4-204ENST00000527149 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
SMCO4-204ENST00000527149 HDGFP51858 240 aaKnown RBP24.27■■□□□ 1.48
SMCO4-204ENST00000527149 DIP2AQ14689 1571 aa24.27■■□□□ 1.48
SMCO4-204ENST00000527149 PPP1R15AO75807 674 aaPredicted RBP24.26■■□□□ 1.47
SMCO4-204ENST00000527149 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
SMCO4-204ENST00000527149 ADGRF5Q8IZF2 1346 aa24.23■■□□□ 1.47
SMCO4-204ENST00000527149 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
SMCO4-204ENST00000527149 CLSPNQ9HAW4 1339 aa24.21■■□□□ 1.47
SMCO4-204ENST00000527149 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
SMCO4-204ENST00000527149 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
SMCO4-204ENST00000527149 NWD1Q149M9 1564 aa24.2■■□□□ 1.46
SMCO4-204ENST00000527149 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
SMCO4-204ENST00000527149 ALKQ9UM73 1620 aa24.19■■□□□ 1.46
SMCO4-204ENST00000527149 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
SMCO4-204ENST00000527149 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
SMCO4-204ENST00000527149 CHD2O14647 1828 aaKnown RBP24.17■■□□□ 1.46
SMCO4-204ENST00000527149 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
SMCO4-204ENST00000527149 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
SMCO4-204ENST00000527149 TBX22Q9Y458 520 aa24.16■■□□□ 1.46
SMCO4-204ENST00000527149 LAMC1P11047 1609 aa24.15■■□□□ 1.46
SMCO4-204ENST00000527149 XRN1Q8IZH2 1706 aaKnown RBP24.14■■□□□ 1.45
SMCO4-204ENST00000527149 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
SMCO4-204ENST00000527149 L3MBTL2Q969R5 705 aa24.14■■□□□ 1.45
SMCO4-204ENST00000527149 METP08581 1390 aa24.13■■□□□ 1.45
SMCO4-204ENST00000527149 PIK3R4Q99570 1358 aa24.13■■□□□ 1.45
SMCO4-204ENST00000527149 PTPRUQ92729 1446 aa24.12■■□□□ 1.45
SMCO4-204ENST00000527149 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
SMCO4-204ENST00000527149 STAC3Q96MF2 364 aa24.12■■□□□ 1.45
SMCO4-204ENST00000527149 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
SMCO4-204ENST00000527149 BCANQ96GW7 911 aa24.11■■□□□ 1.45
SMCO4-204ENST00000527149 CPS1P31327 1500 aa24.1■■□□□ 1.45
SMCO4-204ENST00000527149 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
SMCO4-204ENST00000527149 ADGRB1O14514 1584 aa24.08■■□□□ 1.45
SMCO4-204ENST00000527149 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
SMCO4-204ENST00000527149 KIAA1210Q9ULL0 1709 aa24.07■■□□□ 1.44
SMCO4-204ENST00000527149 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
SMCO4-204ENST00000527149 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
SMCO4-204ENST00000527149 KCNA6P17658 529 aa24.05■■□□□ 1.44
SMCO4-204ENST00000527149 LRRC7Q96NW7 1537 aa24.04■■□□□ 1.44
SMCO4-204ENST00000527149 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
SMCO4-204ENST00000527149 CFAP70Q5T0N1 1121 aa24.03■■□□□ 1.44
SMCO4-204ENST00000527149 KNDC1Q76NI1 1749 aa24.03■■□□□ 1.44
SMCO4-204ENST00000527149 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
SMCO4-204ENST00000527149 TECPR2O15040 1411 aa24.01■■□□□ 1.43
SMCO4-204ENST00000527149 PTCH1Q13635 1447 aa24■■□□□ 1.43
SMCO4-204ENST00000527149 LRPPRCP42704 1394 aaKnown RBP23.99■■□□□ 1.43
SMCO4-204ENST00000527149 AMOTL2Q9Y2J4 779 aa23.98■■□□□ 1.43
SMCO4-204ENST00000527149 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
SMCO4-204ENST00000527149 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
SMCO4-204ENST00000527149 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
SMCO4-204ENST00000527149 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
SMCO4-204ENST00000527149 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
SMCO4-204ENST00000527149 ROBO2Q9HCK4 1378 aa23.95■■□□□ 1.42
SMCO4-204ENST00000527149 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
SMCO4-204ENST00000527149 TMEM94Q12767 1356 aa23.94■■□□□ 1.42
SMCO4-204ENST00000527149 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
SMCO4-204ENST00000527149 CERKQ8TCT0 537 aa23.93■■□□□ 1.42
SMCO4-204ENST00000527149 DLC1Q96QB1 1528 aa23.93■■□□□ 1.42
SMCO4-204ENST00000527149 NBPF1Q3BBV0 1214 aa23.91■■□□□ 1.42
SMCO4-204ENST00000527149 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
SMCO4-204ENST00000527149 ARHGEF28Q8N1W1 1705 aaKnown RBP23.9■■□□□ 1.42
SMCO4-204ENST00000527149 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
SMCO4-204ENST00000527149 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.41
SMCO4-204ENST00000527149 PROSER2Q86WR7 435 aaPredicted RBP23.88■■□□□ 1.41
SMCO4-204ENST00000527149 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
SMCO4-204ENST00000527149 RBM33Q96EV2 1170 aaKnown RBP23.87■■□□□ 1.41
SMCO4-204ENST00000527149 STK26Q9P289 416 aa23.86■■□□□ 1.41
SMCO4-204ENST00000527149 PLEKHH1Q9ULM0 1364 aa23.86■■□□□ 1.41
SMCO4-204ENST00000527149 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
SMCO4-204ENST00000527149 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
SMCO4-204ENST00000527149 ROCK2O75116 1388 aaKnown RBP23.83■■□□□ 1.41
SMCO4-204ENST00000527149 SIRT1Q96EB6 747 aa23.83■■□□□ 1.41
SMCO4-204ENST00000527149 DCCP43146 1447 aa23.79■■□□□ 1.4
SMCO4-204ENST00000527149 WAPLQ7Z5K2 1190 aa23.79■■□□□ 1.4
SMCO4-204ENST00000527149 TRAK1Q9UPV9 953 aa23.79■■□□□ 1.4
SMCO4-204ENST00000527149 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
SMCO4-204ENST00000527149 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
SMCO4-204ENST00000527149 PRAM1Q96QH2 718 aa23.77■■□□□ 1.4
SMCO4-204ENST00000527149 MSH6P52701 1360 aa23.77■■□□□ 1.4
SMCO4-204ENST00000527149 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms