RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 NECTIN2Q92692 538 aa8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 NPM1P06748 294 aaKnown RBP eCLIP8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 DAPK1P53355 1430 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 EXOSC9Q06265 439 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 ERCC6Q03468 1493 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 PTPN23Q9H3S7 1636 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 DMRT2Q9Y5R5 561 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 PBRM1Q86U86 1689 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 DNMBPQ6XZF7 1577 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 SLFN5Q08AF3 891 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
TGFBR3-207ENST00000525962 ABCC5O15440 1437 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 FBLN1P23142 703 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 RIPK4P57078 832 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 THUMPD2Q9BTF0 503 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 CHMP5Q9NZZ3 219 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 MAP3K1Q13233 1512 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 DHX29Q7Z478 1369 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 DISP3Q9P2K9 1392 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 SPAG9O60271 1321 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
TGFBR3-207ENST00000525962 CALD1Q05682 793 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 MCTP1Q6DN14 999 aa8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 ESF1Q9H501 851 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 URB2Q14146 1524 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 EFCAB2Q5VUJ9 269 aa8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
TGFBR3-207ENST00000525962 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
TGFBR3-207ENST00000525962 CASC1Q6TDU7 716 aa8.67□□□□□ -1.02
TGFBR3-207ENST00000525962 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
TGFBR3-207ENST00000525962 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
TGFBR3-207ENST00000525962 RPRD2Q5VT52 1461 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-207ENST00000525962 IPO8O15397 1037 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-207ENST00000525962 MCM4P33991 863 aa8.66□□□□□ -1.02
TGFBR3-207ENST00000525962 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-207ENST00000525962 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
TGFBR3-207ENST00000525962 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-207ENST00000525962 PLEKHH1Q9ULM0 1364 aa8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 RLBP1P12271 317 aa8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 CAVIN1Q6NZI2 390 aaKnown RBP8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 EPRSP07814 1512 aaKnown RBP8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 TOPBP1Q92547 1522 aa8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 CARMIL2Q6F5E8 1435 aa8.65□□□□□ -1.02
TGFBR3-207ENST00000525962 RILPL2Q969X0 211 aa8.65□□□□□ -1.03
TGFBR3-207ENST00000525962 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
TGFBR3-207ENST00000525962 NAP1L2Q9ULW6 460 aaPredicted RBP8.64□□□□□ -1.03
TGFBR3-207ENST00000525962 KCNJ4P48050 445 aa8.64□□□□□ -1.03
TGFBR3-207ENST00000525962 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 XRCC6P12956 609 aaKnown RBP eCLIP8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 ERBINQ96RT1 1412 aa8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
TGFBR3-207ENST00000525962 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 RARSP54136 660 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 GRPEL1Q9HAV7 217 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 DTNBO60941 627 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 DRC7Q8IY82 874 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 PRPF40AO75400 957 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 MIA2Q96PC5 1412 aa8.62□□□□□ -1.03
TGFBR3-207ENST00000525962 PTPRGP23470 1445 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 DDX19BQ9UMR2 479 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 WASHC2CQ9Y4E1 1318 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 EHBP1L1Q8N3D4 1523 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 KANK1Q14678 1352 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 PDE3AQ14432 1141 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 ESPNB1AK53 854 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 MRE11P49959 708 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 SSH1Q8WYL5 1049 aa8.61□□□□□ -1.03
TGFBR3-207ENST00000525962 DCTN1Q14203 1278 aa8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 SUPT6HQ7KZ85 1726 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 GOLGA6L4A6NEF3 574 aa8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 SSFA2P28290 1259 aa8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 MVPQ14764 893 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 TESK2Q96S53 571 aa8.6□□□□□ -1.03
TGFBR3-207ENST00000525962 ARHGEF11O15085 1522 aa8.59□□□□□ -1.03
TGFBR3-207ENST00000525962 PRKAR2BP31323 418 aa8.59□□□□□ -1.03
TGFBR3-207ENST00000525962 FGD1P98174 961 aa8.59□□□□□ -1.03
TGFBR3-207ENST00000525962 LARP6Q9BRS8 491 aaKnown RBP8.59□□□□□ -1.03
TGFBR3-207ENST00000525962 SMARCA5O60264 1052 aaPredicted RBP8.59□□□□□ -1.04
TGFBR3-207ENST00000525962 DIAPH1O60610 1272 aaKnown RBP8.59□□□□□ -1.04
TGFBR3-207ENST00000525962 KIAA1211Q6ZU35 1233 aa8.59□□□□□ -1.04
TGFBR3-207ENST00000525962 PRDM10Q9NQV6 1147 aa8.59□□□□□ -1.04
TGFBR3-207ENST00000525962 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-207ENST00000525962 A0A0G2JS52 829 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms