RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, human

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC17-208	ENST00000525599	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.21	■■■□□ 2.75
CCDC17-208	ENST00000525599	RPGRIP1L	Q68CZ1	1315 aa		32.21	■■■□□ 2.75
CCDC17-208	ENST00000525599	ZNF326	Q5BKZ1	582 aa	Known RBP	32.19	■■■□□ 2.74
CCDC17-208	ENST00000525599	TXNDC2	Q86VQ3	553 aa		32.19	■■■□□ 2.74
CCDC17-208	ENST00000525599	DMRT2	Q9Y5R5	561 aa		32.19	■■■□□ 2.74
CCDC17-208	ENST00000525599	NCKAP5L	Q9HCH0	1330 aa		32.17	■■■□□ 2.74
CCDC17-208	ENST00000525599	NEXMIF	Q5QGS0	1516 aa		32.17	■■■□□ 2.74
CCDC17-208	ENST00000525599	LTK	P29376	864 aa		32.16	■■■□□ 2.74
CCDC17-208	ENST00000525599	CLSPN	Q9HAW4	1339 aa		32.14	■■■□□ 2.74
CCDC17-208	ENST00000525599	NPHP4	O75161	1426 aa	Predicted RBP	32.13	■■■□□ 2.73
CCDC17-208	ENST00000525599	PPL	O60437	1756 aa		32.12	■■■□□ 2.73
CCDC17-208	ENST00000525599	IQGAP1	P46940	1657 aa		32.11	■■■□□ 2.73
CCDC17-208	ENST00000525599	PPP1R15A	O75807	674 aa	Predicted RBP	32.1	■■■□□ 2.73
CCDC17-208	ENST00000525599	PLEKHG1	Q9ULL1	1385 aa		32.1	■■■□□ 2.73
CCDC17-208	ENST00000525599	RGL3	Q3MIN7	710 aa		32.09	■■■□□ 2.73
CCDC17-208	ENST00000525599	IFT172	Q9UG01	1749 aa		32.09	■■■□□ 2.73
CCDC17-208	ENST00000525599	VGF	O15240	615 aa	Predicted RBP	32.08	■■■□□ 2.73
CCDC17-208	ENST00000525599	STAC3	Q96MF2	364 aa		32.05	■■■□□ 2.72
CCDC17-208	ENST00000525599	SIN3A	Q96ST3	1273 aa		32.03	■■■□□ 2.72
CCDC17-208	ENST00000525599	MYOM2	P54296	1465 aa		32.03	■■■□□ 2.72
CCDC17-208	ENST00000525599	SETBP1	Q9Y6X0	1596 aa		32.01	■■■□□ 2.71
CCDC17-208	ENST00000525599	NUTM2D	Q5VT03	806 aa	Predicted RBP	32	■■■□□ 2.71
CCDC17-208	ENST00000525599	CCER1	Q8TC90	406 aa	Predicted RBP	32	■■■□□ 2.71
CCDC17-208	ENST00000525599	DIP2A	Q14689	1571 aa		31.99	■■■□□ 2.71
CCDC17-208	ENST00000525599	NEUROD1	Q13562	356 aa		31.97	■■■□□ 2.71
CCDC17-208	ENST00000525599	NRXN1	Q9ULB1	1477 aa		31.96	■■■□□ 2.71
CCDC17-208	ENST00000525599	BCAN	Q96GW7	911 aa		31.94	■■■□□ 2.7
CCDC17-208	ENST00000525599	NRXN3	Q9Y4C0	1643 aa		31.94	■■■□□ 2.7
CCDC17-208	ENST00000525599	ADAMTS13	Q76LX8	1427 aa		31.93	■■■□□ 2.7
CCDC17-208	ENST00000525599	DCAF11	Q8TEB1	546 aa		31.92	■■■□□ 2.7
CCDC17-208	ENST00000525599	TBX22	Q9Y458	520 aa		31.92	■■■□□ 2.7
CCDC17-208	ENST00000525599	ADGRF5	Q8IZF2	1346 aa		31.92	■■■□□ 2.7
CCDC17-208	ENST00000525599	PIK3C2G	O75747	1445 aa		31.91	■■■□□ 2.7
CCDC17-208	ENST00000525599	SLC26A8	Q96RN1	970 aa		31.88	■■■□□ 2.69
CCDC17-208	ENST00000525599	TONSL	Q96HA7	1378 aa		31.88	■■■□□ 2.69
CCDC17-208	ENST00000525599	PIK3R4	Q99570	1358 aa		31.88	■■■□□ 2.69
CCDC17-208	ENST00000525599	L3MBTL2	Q969R5	705 aa		31.87	■■■□□ 2.69
CCDC17-208	ENST00000525599	LAMC1	P11047	1609 aa		31.85	■■■□□ 2.69
CCDC17-208	ENST00000525599	ALK	Q9UM73	1620 aa		31.84	■■■□□ 2.69
CCDC17-208	ENST00000525599	TIMELESS	Q9UNS1	1208 aa		31.84	■■■□□ 2.69
CCDC17-208	ENST00000525599	KDM2A	Q9Y2K7	1162 aa		31.83	■■■□□ 2.69
CCDC17-208	ENST00000525599	SETD1A	O15047	1707 aa	Known RBP	31.83	■■■□□ 2.69
CCDC17-208	ENST00000525599	SENP3	Q9H4L4	574 aa	Predicted RBP	31.79	■■■□□ 2.68
CCDC17-208	ENST00000525599	NWD1	Q149M9	1564 aa		31.78	■■■□□ 2.68
CCDC17-208	ENST00000525599	PRAG1	Q86YV5	1406 aa		31.78	■■■□□ 2.68
CCDC17-208	ENST00000525599	C14orf93	Q9H972	538 aa	Known RBP	31.78	■■■□□ 2.68
CCDC17-208	ENST00000525599	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.78	■■■□□ 2.68
CCDC17-208	ENST00000525599	CHD2	O14647	1828 aa	Known RBP	31.77	■■■□□ 2.68
CCDC17-208	ENST00000525599	KCNA6	P17658	529 aa		31.76	■■■□□ 2.68
CCDC17-208	ENST00000525599	CPS1	P31327	1500 aa		31.76	■■■□□ 2.67
CCDC17-208	ENST00000525599	KIAA1210	Q9ULL0	1709 aa		31.75	■■■□□ 2.67
CCDC17-208	ENST00000525599	LTBP4	Q8N2S1	1624 aa		31.75	■■■□□ 2.67
CCDC17-208	ENST00000525599	MET	P08581	1390 aa		31.74	■■■□□ 2.67
CCDC17-208	ENST00000525599	NKTR	P30414	1462 aa	Known RBP	31.73	■■■□□ 2.67
CCDC17-208	ENST00000525599	STRCP1	A6NGW2	1772 aa		31.71	■■■□□ 2.67
CCDC17-208	ENST00000525599	CFAP70	Q5T0N1	1121 aa		31.7	■■■□□ 2.67
CCDC17-208	ENST00000525599	XRN1	Q8IZH2	1706 aa	Known RBP	31.7	■■■□□ 2.66
CCDC17-208	ENST00000525599	ASXL1	Q8IXJ9	1541 aa		31.68	■■■□□ 2.66
CCDC17-208	ENST00000525599	PTPRU	Q92729	1446 aa		31.68	■■■□□ 2.66
CCDC17-208	ENST00000525599	ADGRB1	O14514	1584 aa		31.66	■■■□□ 2.66
CCDC17-208	ENST00000525599	AMOTL2	Q9Y2J4	779 aa		31.66	■■■□□ 2.66
CCDC17-208	ENST00000525599	LRPPRC	P42704	1394 aa	Known RBP	31.64	■■■□□ 2.65
CCDC17-208	ENST00000525599	TECPR2	O15040	1411 aa		31.62	■■■□□ 2.65
CCDC17-208	ENST00000525599	TRPM1	Q7Z4N2	1603 aa		31.62	■■■□□ 2.65
CCDC17-208	ENST00000525599	PTCH1	Q13635	1447 aa		31.61	■■■□□ 2.65
CCDC17-208	ENST00000525599	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.61	■■■□□ 2.65
CCDC17-208	ENST00000525599	KNDC1	Q76NI1	1749 aa		31.61	■■■□□ 2.65
CCDC17-208	ENST00000525599	ABCC11	Q96J66	1382 aa		31.6	■■■□□ 2.65
CCDC17-208	ENST00000525599	LRRC7	Q96NW7	1537 aa		31.6	■■■□□ 2.65
CCDC17-208	ENST00000525599	IQSEC2	Q5JU85	1478 aa		31.59	■■■□□ 2.65
CCDC17-208	ENST00000525599	TMEM132E	Q6IEE7	984 aa		31.59	■■■□□ 2.65
CCDC17-208	ENST00000525599	NBPF8	Q3BBV2	869 aa		31.57	■■■□□ 2.64
CCDC17-208	ENST00000525599	NCOA3	Q9Y6Q9	1424 aa		31.57	■■■□□ 2.64
CCDC17-208	ENST00000525599	RALGAPB	Q86X10	1494 aa		31.55	■■■□□ 2.64
CCDC17-208	ENST00000525599	PROSER2	Q86WR7	435 aa	Predicted RBP	31.54	■■■□□ 2.64
CCDC17-208	ENST00000525599	SIRT1	Q96EB6	747 aa		31.54	■■■□□ 2.64
CCDC17-208	ENST00000525599	DLC1	Q96QB1	1528 aa		31.54	■■■□□ 2.64
CCDC17-208	ENST00000525599	CERK	Q8TCT0	537 aa		31.52	■■■□□ 2.64
CCDC17-208	ENST00000525599	TMEM94	Q12767	1356 aa		31.52	■■■□□ 2.64
CCDC17-208	ENST00000525599	GPRASP1	Q5JY77	1395 aa		31.52	■■■□□ 2.64
CCDC17-208	ENST00000525599	FAM135B	Q49AJ0	1406 aa		31.51	■■■□□ 2.63
CCDC17-208	ENST00000525599	NBPF1	Q3BBV0	1214 aa		31.5	■■■□□ 2.63
CCDC17-208	ENST00000525599	STK26	Q9P289	416 aa		31.5	■■■□□ 2.63
CCDC17-208	ENST00000525599	ROCK2	O75116	1388 aa	Known RBP	31.5	■■■□□ 2.63
CCDC17-208	ENST00000525599	ROBO2	Q9HCK4	1378 aa		31.5	■■■□□ 2.63
CCDC17-208	ENST00000525599	XIRP1	Q702N8	1843 aa	Known RBP	31.49	■■■□□ 2.63
CCDC17-208	ENST00000525599	TRAK1	Q9UPV9	953 aa		31.42	■■■□□ 2.62
CCDC17-208	ENST00000525599	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.42	■■■□□ 2.62
CCDC17-208	ENST00000525599	ADGRL3	Q9HAR2	1447 aa		31.4	■■■□□ 2.62
CCDC17-208	ENST00000525599	MSH6	P52701	1360 aa		31.39	■■■□□ 2.62
CCDC17-208	ENST00000525599	CARD11	Q9BXL7	1154 aa		31.38	■■■□□ 2.61
CCDC17-208	ENST00000525599	DCC	P43146	1447 aa		31.37	■■■□□ 2.61
CCDC17-208	ENST00000525599	C14orf37	Q86TY3	774 aa		31.37	■■■□□ 2.61
CCDC17-208	ENST00000525599	RBM33	Q96EV2	1170 aa	Known RBP	31.37	■■■□□ 2.61
CCDC17-208	ENST00000525599	PRAM1	Q96QH2	718 aa		31.37	■■■□□ 2.61
CCDC17-208	ENST00000525599	C19orf44	Q9H6X5	657 aa		31.37	■■■□□ 2.61
CCDC17-208	ENST00000525599	EIF3A	Q14152	1382 aa	Known RBP	31.36	■■■□□ 2.61
CCDC17-208	ENST00000525599	NALCN	Q8IZF0	1738 aa		31.36	■■■□□ 2.61
CCDC17-208	ENST00000525599	WAPL	Q7Z5K2	1190 aa		31.35	■■■□□ 2.61
CCDC17-208	ENST00000525599	POGK	Q9P215	609 aa		31.35	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 262.2 ms