RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 SETD1AO15047 1707 aaKnown RBP17.45■□□□□ 0.38
CTTN-209ENST00000525276 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
CTTN-209ENST00000525276 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
CTTN-209ENST00000525276 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
CTTN-209ENST00000525276 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
CTTN-209ENST00000525276 KANK1Q14678 1352 aa17.42■□□□□ 0.38
CTTN-209ENST00000525276 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
CTTN-209ENST00000525276 COL16A1Q07092 1604 aaPredicted RBP17.41■□□□□ 0.38
CTTN-209ENST00000525276 ITGAEP38570 1179 aa17.41■□□□□ 0.38
CTTN-209ENST00000525276 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
CTTN-209ENST00000525276 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
CTTN-209ENST00000525276 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
CTTN-209ENST00000525276 SLAIN2Q9P270 581 aa17.38■□□□□ 0.37
CTTN-209ENST00000525276 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
CTTN-209ENST00000525276 LRP6O75581 1613 aa17.38■□□□□ 0.37
CTTN-209ENST00000525276 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
CTTN-209ENST00000525276 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
CTTN-209ENST00000525276 GCC2Q8IWJ2 1684 aa17.37■□□□□ 0.37
CTTN-209ENST00000525276 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
CTTN-209ENST00000525276 MSH6P52701 1360 aa17.37■□□□□ 0.37
CTTN-209ENST00000525276 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
CTTN-209ENST00000525276 JCADQ9P266 1359 aa17.36■□□□□ 0.37
CTTN-209ENST00000525276 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
CTTN-209ENST00000525276 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
CTTN-209ENST00000525276 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
CTTN-209ENST00000525276 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
CTTN-209ENST00000525276 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
CTTN-209ENST00000525276 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
CTTN-209ENST00000525276 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
CTTN-209ENST00000525276 UNC13BO14795 1591 aa17.28■□□□□ 0.36
CTTN-209ENST00000525276 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
CTTN-209ENST00000525276 E9PCH4 1651 aa17.28■□□□□ 0.36
CTTN-209ENST00000525276 BCANQ96GW7 911 aa17.27■□□□□ 0.36
CTTN-209ENST00000525276 PTPRUQ92729 1446 aa17.27■□□□□ 0.35
CTTN-209ENST00000525276 EP400Q96L91 3159 aa17.26■□□□□ 0.35
CTTN-209ENST00000525276 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
CTTN-209ENST00000525276 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTTN-209ENST00000525276 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
CTTN-209ENST00000525276 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
CTTN-209ENST00000525276 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
CTTN-209ENST00000525276 NAIPQ13075 1403 aa17.22■□□□□ 0.35
CTTN-209ENST00000525276 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
CTTN-209ENST00000525276 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
CTTN-209ENST00000525276 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
CTTN-209ENST00000525276 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
CTTN-209ENST00000525276 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
CTTN-209ENST00000525276 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
CTTN-209ENST00000525276 NUP155O75694 1391 aa17.2■□□□□ 0.34
CTTN-209ENST00000525276 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
CTTN-209ENST00000525276 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
CTTN-209ENST00000525276 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
CTTN-209ENST00000525276 TRPM2O94759 1503 aa17.19■□□□□ 0.34
CTTN-209ENST00000525276 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
CTTN-209ENST00000525276 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
CTTN-209ENST00000525276 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
CTTN-209ENST00000525276 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
CTTN-209ENST00000525276 DCCP43146 1447 aa17.17■□□□□ 0.34
CTTN-209ENST00000525276 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
CTTN-209ENST00000525276 SETBP1Q9Y6X0 1596 aa17.16■□□□□ 0.34
CTTN-209ENST00000525276 MST1RQ04912 1400 aa17.16■□□□□ 0.34
CTTN-209ENST00000525276 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
CTTN-209ENST00000525276 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
CTTN-209ENST00000525276 ATF3P18847 181 aa17.16■□□□□ 0.34
CTTN-209ENST00000525276 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
CTTN-209ENST00000525276 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
CTTN-209ENST00000525276 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
CTTN-209ENST00000525276 RXRBP28702 533 aa17.12■□□□□ 0.33
CTTN-209ENST00000525276 AFF2P51816 1311 aa17.12■□□□□ 0.33
CTTN-209ENST00000525276 METP08581 1390 aa17.12■□□□□ 0.33
CTTN-209ENST00000525276 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
CTTN-209ENST00000525276 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
CTTN-209ENST00000525276 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
CTTN-209ENST00000525276 RGS12O14924 1447 aa17.11■□□□□ 0.33
CTTN-209ENST00000525276 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
CTTN-209ENST00000525276 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
CTTN-209ENST00000525276 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
CTTN-209ENST00000525276 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
CTTN-209ENST00000525276 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
CTTN-209ENST00000525276 LAMC1P11047 1609 aa17.07■□□□□ 0.32
CTTN-209ENST00000525276 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
CTTN-209ENST00000525276 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
CTTN-209ENST00000525276 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
CTTN-209ENST00000525276 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
CTTN-209ENST00000525276 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
CTTN-209ENST00000525276 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
CTTN-209ENST00000525276 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
CTTN-209ENST00000525276 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
CTTN-209ENST00000525276 RBM6P78332 1123 aaKnown RBP17■□□□□ 0.31
CTTN-209ENST00000525276 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
CTTN-209ENST00000525276 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
CTTN-209ENST00000525276 ROBO2Q9HCK4 1378 aa16.98■□□□□ 0.31
CTTN-209ENST00000525276 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
CTTN-209ENST00000525276 PRAG1Q86YV5 1406 aa16.97■□□□□ 0.31
CTTN-209ENST00000525276 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
CTTN-209ENST00000525276 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
CTTN-209ENST00000525276 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.3
CTTN-209ENST00000525276 ADAMTS2O95450 1211 aa16.95■□□□□ 0.3
CTTN-209ENST00000525276 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
CTTN-209ENST00000525276 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
CTTN-209ENST00000525276 ATRNO75882 1429 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms