RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
TSKU-202ENST00000525167 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
TSKU-202ENST00000525167 HDGFP51858 240 aaKnown RBP26.47■■□□□ 1.83
TSKU-202ENST00000525167 PROSER2Q86WR7 435 aaPredicted RBP26.46■■□□□ 1.83
TSKU-202ENST00000525167 SENP3Q9H4L4 574 aaPredicted RBP26.46■■□□□ 1.83
TSKU-202ENST00000525167 PLEKHG1Q9ULL1 1385 aa26.46■■□□□ 1.83
TSKU-202ENST00000525167 TMEM131LA2VDJ0 1609 aa26.44■■□□□ 1.82
TSKU-202ENST00000525167 RIMS2Q9UQ26 1411 aa26.42■■□□□ 1.82
TSKU-202ENST00000525167 BCANQ96GW7 911 aa26.41■■□□□ 1.82
TSKU-202ENST00000525167 IQGAP3Q86VI3 1631 aa26.39■■□□□ 1.82
TSKU-202ENST00000525167 MYO5BQ9ULV0 1848 aa26.39■■□□□ 1.82
TSKU-202ENST00000525167 ROBO1Q9Y6N7 1651 aa26.39■■□□□ 1.82
TSKU-202ENST00000525167 MSH6P52701 1360 aa26.39■■□□□ 1.82
TSKU-202ENST00000525167 PPP1R15AO75807 674 aaPredicted RBP26.39■■□□□ 1.82
TSKU-202ENST00000525167 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.39■■□□□ 1.82
TSKU-202ENST00000525167 E9PCH4 1651 aa26.38■■□□□ 1.81
TSKU-202ENST00000525167 CHD2O14647 1828 aaKnown RBP26.37■■□□□ 1.81
TSKU-202ENST00000525167 TBX22Q9Y458 520 aa26.36■■□□□ 1.81
TSKU-202ENST00000525167 NCOA3Q9Y6Q9 1424 aa26.35■■□□□ 1.81
TSKU-202ENST00000525167 DIP2AQ14689 1571 aa26.33■■□□□ 1.81
TSKU-202ENST00000525167 RBM33Q96EV2 1170 aaKnown RBP26.33■■□□□ 1.81
TSKU-202ENST00000525167 PIK3R4Q99570 1358 aa26.31■■□□□ 1.8
TSKU-202ENST00000525167 SLAIN2Q9P270 581 aa26.3■■□□□ 1.8
TSKU-202ENST00000525167 RGS17Q9UGC6 210 aaPredicted RBP26.3■■□□□ 1.8
TSKU-202ENST00000525167 NUP155O75694 1391 aa26.3■■□□□ 1.8
TSKU-202ENST00000525167 CHGAP10645 457 aaKnown RBP26.29■■□□□ 1.8
TSKU-202ENST00000525167 ADAMTS13Q76LX8 1427 aa26.29■■□□□ 1.8
TSKU-202ENST00000525167 PHLPP1O60346 1717 aa26.23■■□□□ 1.79
TSKU-202ENST00000525167 TRPM2O94759 1503 aa26.23■■□□□ 1.79
TSKU-202ENST00000525167 JCADQ9P266 1359 aa26.21■■□□□ 1.79
TSKU-202ENST00000525167 CADPS2Q86UW7 1296 aa26.19■■□□□ 1.78
TSKU-202ENST00000525167 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
TSKU-202ENST00000525167 ITGAEP38570 1179 aa26.18■■□□□ 1.78
TSKU-202ENST00000525167 NUTM2DQ5VT03 806 aaPredicted RBP26.18■■□□□ 1.78
TSKU-202ENST00000525167 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
TSKU-202ENST00000525167 C14orf37Q86TY3 774 aa26.17■■□□□ 1.78
TSKU-202ENST00000525167 COL16A1Q07092 1604 aaPredicted RBP26.17■■□□□ 1.78
TSKU-202ENST00000525167 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.16■■□□□ 1.78
TSKU-202ENST00000525167 SETBP1Q9Y6X0 1596 aa26.16■■□□□ 1.78
TSKU-202ENST00000525167 ATF3P18847 181 aa26.14■■□□□ 1.78
TSKU-202ENST00000525167 POTEAQ6S8J7 498 aa26.13■■□□□ 1.77
TSKU-202ENST00000525167 AHDC1Q5TGY3 1603 aaPredicted RBP26.13■■□□□ 1.77
TSKU-202ENST00000525167 DCCP43146 1447 aa26.13■■□□□ 1.77
TSKU-202ENST00000525167 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
TSKU-202ENST00000525167 PTPRUQ92729 1446 aa26.12■■□□□ 1.77
TSKU-202ENST00000525167 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
TSKU-202ENST00000525167 XRN1Q8IZH2 1706 aaKnown RBP26.1■■□□□ 1.77
TSKU-202ENST00000525167 SPATA31A6Q5VVP1 1343 aa26.1■■□□□ 1.77
TSKU-202ENST00000525167 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
TSKU-202ENST00000525167 ZNF326Q5BKZ1 582 aaKnown RBP26.05■■□□□ 1.76
TSKU-202ENST00000525167 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
TSKU-202ENST00000525167 SHPRHQ149N8 1683 aa26.05■■□□□ 1.76
TSKU-202ENST00000525167 NAIPQ13075 1403 aa26.03■■□□□ 1.76
TSKU-202ENST00000525167 NEXMIFQ5QGS0 1516 aa26.03■■□□□ 1.76
TSKU-202ENST00000525167 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
TSKU-202ENST00000525167 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
TSKU-202ENST00000525167 LRP6O75581 1613 aa26.01■■□□□ 1.75
TSKU-202ENST00000525167 METP08581 1390 aa26■■□□□ 1.75
TSKU-202ENST00000525167 ASXL1Q8IXJ9 1541 aa25.98■■□□□ 1.75
TSKU-202ENST00000525167 MST1RQ04912 1400 aa25.97■■□□□ 1.75
TSKU-202ENST00000525167 KIF1BO60333 1816 aa25.97■■□□□ 1.75
TSKU-202ENST00000525167 ADGRL3Q9HAR2 1447 aa25.97■■□□□ 1.75
TSKU-202ENST00000525167 MEX3CQ5U5Q3 659 aaKnown RBP25.96■■□□□ 1.75
TSKU-202ENST00000525167 ZNF772Q68DY9 489 aaPredicted RBP25.96■■□□□ 1.75
TSKU-202ENST00000525167 SETD5Q9C0A6 1442 aa25.95■■□□□ 1.74
TSKU-202ENST00000525167 NHSL1Q5SYE7 1610 aa25.94■■□□□ 1.74
TSKU-202ENST00000525167 HFM1A2PYH4 1435 aa25.94■■□□□ 1.74
TSKU-202ENST00000525167 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
TSKU-202ENST00000525167 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
TSKU-202ENST00000525167 PRAG1Q86YV5 1406 aa25.89■■□□□ 1.74
TSKU-202ENST00000525167 NALCNQ8IZF0 1738 aa25.89■■□□□ 1.74
TSKU-202ENST00000525167 RPGRIP1LQ68CZ1 1315 aa25.88■■□□□ 1.73
TSKU-202ENST00000525167 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
TSKU-202ENST00000525167 LRRC59Q96AG4 307 aaKnown RBP25.87■■□□□ 1.73
TSKU-202ENST00000525167 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
TSKU-202ENST00000525167 SLC4A1APQ9BWU0 796 aaKnown RBP25.83■■□□□ 1.73
TSKU-202ENST00000525167 C1orf167Q5SNV9 1468 aa25.82■■□□□ 1.72
TSKU-202ENST00000525167 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
TSKU-202ENST00000525167 LAMC1P11047 1609 aa25.81■■□□□ 1.72
TSKU-202ENST00000525167 NUTM2BA6NNL0 878 aaPredicted RBP25.81■■□□□ 1.72
TSKU-202ENST00000525167 NUTM2EB1AL46 878 aaPredicted RBP25.81■■□□□ 1.72
TSKU-202ENST00000525167 NUTM2AQ8IVF1 878 aaPredicted RBP25.81■■□□□ 1.72
TSKU-202ENST00000525167 RXRBP28702 533 aa25.8■■□□□ 1.72
TSKU-202ENST00000525167 ROBO2Q9HCK4 1378 aa25.8■■□□□ 1.72
TSKU-202ENST00000525167 PPLO60437 1756 aa25.79■■□□□ 1.72
TSKU-202ENST00000525167 PNPLA6Q8IY17 1366 aa25.79■■□□□ 1.72
TSKU-202ENST00000525167 AFF2P51816 1311 aa25.77■■□□□ 1.72
TSKU-202ENST00000525167 DDX17Q92841 729 aaKnown RBP25.74■■□□□ 1.71
TSKU-202ENST00000525167 SOS2Q07890 1332 aaPredicted RBP25.72■■□□□ 1.71
TSKU-202ENST00000525167 UPF1Q92900 1129 aaKnown RBP eCLIP25.72■■□□□ 1.71
TSKU-202ENST00000525167 CCDC144AA2RUR9 1427 aa25.71■■□□□ 1.71
TSKU-202ENST00000525167 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
TSKU-202ENST00000525167 C8orf37Q96NL8 207 aa25.69■■□□□ 1.7
TSKU-202ENST00000525167 ORAI2Q96SN7 254 aa25.68■■□□□ 1.7
TSKU-202ENST00000525167 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
TSKU-202ENST00000525167 TECPR2O15040 1411 aa25.66■■□□□ 1.7
TSKU-202ENST00000525167 SPATA31E1Q6ZUB1 1445 aa25.66■■□□□ 1.7
TSKU-202ENST00000525167 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
TSKU-202ENST00000525167 QTRT2Q9H974 415 aaKnown RBP25.64■■□□□ 1.7
TSKU-202ENST00000525167 ACIN1Q9UKV3 1341 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms