RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
UBXN1-205ENST00000525004 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
UBXN1-205ENST00000525004 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
UBXN1-205ENST00000525004 HDGFP51858 240 aaKnown RBP20.33■□□□□ 0.85
UBXN1-205ENST00000525004 LTKP29376 864 aa20.32■□□□□ 0.84
UBXN1-205ENST00000525004 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
UBXN1-205ENST00000525004 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
UBXN1-205ENST00000525004 HSPA2P54652 639 aa20.31■□□□□ 0.84
UBXN1-205ENST00000525004 L3MBTL2Q969R5 705 aa20.31■□□□□ 0.84
UBXN1-205ENST00000525004 STRCQ7RTU9 1775 aa20.31■□□□□ 0.84
UBXN1-205ENST00000525004 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-205ENST00000525004 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
UBXN1-205ENST00000525004 MED14O60244 1454 aa20.3■□□□□ 0.84
UBXN1-205ENST00000525004 VGFO15240 615 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-205ENST00000525004 TXNDC2Q86VQ3 553 aa20.29■□□□□ 0.84
UBXN1-205ENST00000525004 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
UBXN1-205ENST00000525004 MYOM2P54296 1465 aa20.29■□□□□ 0.84
UBXN1-205ENST00000525004 SCAF11Q99590 1463 aaKnown RBP20.29■□□□□ 0.84
UBXN1-205ENST00000525004 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
UBXN1-205ENST00000525004 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
UBXN1-205ENST00000525004 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
UBXN1-205ENST00000525004 PLEKHG1Q9ULL1 1385 aa20.25■□□□□ 0.83
UBXN1-205ENST00000525004 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
UBXN1-205ENST00000525004 SETBP1Q9Y6X0 1596 aa20.23■□□□□ 0.83
UBXN1-205ENST00000525004 NCKAP5LQ9HCH0 1330 aa20.23■□□□□ 0.83
UBXN1-205ENST00000525004 PIK3C2GO75747 1445 aa20.22■□□□□ 0.83
UBXN1-205ENST00000525004 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
UBXN1-205ENST00000525004 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
UBXN1-205ENST00000525004 IQGAP1P46940 1657 aa20.2■□□□□ 0.82
UBXN1-205ENST00000525004 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-205ENST00000525004 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
UBXN1-205ENST00000525004 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-205ENST00000525004 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
UBXN1-205ENST00000525004 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
UBXN1-205ENST00000525004 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
UBXN1-205ENST00000525004 KIAA1210Q9ULL0 1709 aa20.18■□□□□ 0.82
UBXN1-205ENST00000525004 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
UBXN1-205ENST00000525004 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
UBXN1-205ENST00000525004 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
UBXN1-205ENST00000525004 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
UBXN1-205ENST00000525004 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
UBXN1-205ENST00000525004 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
UBXN1-205ENST00000525004 LAMC1P11047 1609 aa20.14■□□□□ 0.81
UBXN1-205ENST00000525004 TRPM1Q7Z4N2 1603 aa20.12■□□□□ 0.81
UBXN1-205ENST00000525004 CFAP70Q5T0N1 1121 aa20.11■□□□□ 0.81
UBXN1-205ENST00000525004 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
UBXN1-205ENST00000525004 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
UBXN1-205ENST00000525004 CHD2O14647 1828 aaKnown RBP20.1■□□□□ 0.81
UBXN1-205ENST00000525004 ADGRB1O14514 1584 aa20.08■□□□□ 0.81
UBXN1-205ENST00000525004 METP08581 1390 aa20.08■□□□□ 0.8
UBXN1-205ENST00000525004 BCANQ96GW7 911 aa20.07■□□□□ 0.8
UBXN1-205ENST00000525004 GPRASP1Q5JY77 1395 aa20.07■□□□□ 0.8
UBXN1-205ENST00000525004 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
UBXN1-205ENST00000525004 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
UBXN1-205ENST00000525004 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-205ENST00000525004 NBPF1Q3BBV0 1214 aa20.05■□□□□ 0.8
UBXN1-205ENST00000525004 PTPRUQ92729 1446 aa20.03■□□□□ 0.8
UBXN1-205ENST00000525004 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
UBXN1-205ENST00000525004 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.8
UBXN1-205ENST00000525004 ABCC11Q96J66 1382 aa20.02■□□□□ 0.8
UBXN1-205ENST00000525004 NWD1Q149M9 1564 aa20.02■□□□□ 0.8
UBXN1-205ENST00000525004 STRCP1A6NGW2 1772 aa20.02■□□□□ 0.8
UBXN1-205ENST00000525004 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.79
UBXN1-205ENST00000525004 LRPPRCP42704 1394 aaKnown RBP20.01■□□□□ 0.79
UBXN1-205ENST00000525004 KCNA6P17658 529 aa20.01■□□□□ 0.79
UBXN1-205ENST00000525004 TECPR2O15040 1411 aa20.01■□□□□ 0.79
UBXN1-205ENST00000525004 KNDC1Q76NI1 1749 aa20■□□□□ 0.79
UBXN1-205ENST00000525004 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
UBXN1-205ENST00000525004 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
UBXN1-205ENST00000525004 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
UBXN1-205ENST00000525004 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
UBXN1-205ENST00000525004 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
UBXN1-205ENST00000525004 NKTRP30414 1462 aaKnown RBP19.95■□□□□ 0.78
UBXN1-205ENST00000525004 CPS1P31327 1500 aa19.95■□□□□ 0.78
UBXN1-205ENST00000525004 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
UBXN1-205ENST00000525004 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
UBXN1-205ENST00000525004 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
UBXN1-205ENST00000525004 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
UBXN1-205ENST00000525004 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
UBXN1-205ENST00000525004 CARD11Q9BXL7 1154 aa19.93■□□□□ 0.78
UBXN1-205ENST00000525004 ROBO2Q9HCK4 1378 aa19.91■□□□□ 0.78
UBXN1-205ENST00000525004 STK26Q9P289 416 aa19.9■□□□□ 0.78
UBXN1-205ENST00000525004 TRAK1Q9UPV9 953 aa19.9■□□□□ 0.78
UBXN1-205ENST00000525004 XIRP1Q702N8 1843 aaKnown RBP19.89■□□□□ 0.77
UBXN1-205ENST00000525004 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.77
UBXN1-205ENST00000525004 LRRC7Q96NW7 1537 aa19.87■□□□□ 0.77
UBXN1-205ENST00000525004 PROSER2Q86WR7 435 aaPredicted RBP19.85■□□□□ 0.77
UBXN1-205ENST00000525004 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
UBXN1-205ENST00000525004 USP47Q96K76 1375 aa19.84■□□□□ 0.77
UBXN1-205ENST00000525004 PLEKHH1Q9ULM0 1364 aa19.84■□□□□ 0.77
UBXN1-205ENST00000525004 WAPLQ7Z5K2 1190 aa19.84■□□□□ 0.77
UBXN1-205ENST00000525004 PRAM1Q96QH2 718 aa19.84■□□□□ 0.77
UBXN1-205ENST00000525004 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.84■□□□□ 0.77
UBXN1-205ENST00000525004 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.77
UBXN1-205ENST00000525004 TMEM94Q12767 1356 aa19.83■□□□□ 0.76
UBXN1-205ENST00000525004 CENPJQ9HC77 1338 aaPredicted RBP19.82■□□□□ 0.76
UBXN1-205ENST00000525004 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
UBXN1-205ENST00000525004 QRICH2Q9H0J4 1663 aa19.81■□□□□ 0.76
UBXN1-205ENST00000525004 ST20-MTHFSA0A0A6YYL1 179 aa19.8■□□□□ 0.76
UBXN1-205ENST00000525004 POGKQ9P215 609 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms