RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
CSTF3-206ENST00000524827 ZFYVE9O95405 1425 aa21.58■■□□□ 1.05
CSTF3-206ENST00000524827 POTEAQ6S8J7 498 aa21.58■■□□□ 1.05
CSTF3-206ENST00000524827 BCANQ96GW7 911 aa21.58■■□□□ 1.05
CSTF3-206ENST00000524827 MSH6P52701 1360 aa21.58■■□□□ 1.04
CSTF3-206ENST00000524827 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
CSTF3-206ENST00000524827 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
CSTF3-206ENST00000524827 PLEKHG1Q9ULL1 1385 aa21.56■■□□□ 1.04
CSTF3-206ENST00000524827 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
CSTF3-206ENST00000524827 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
CSTF3-206ENST00000524827 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
CSTF3-206ENST00000524827 CHD2O14647 1828 aaKnown RBP21.54■■□□□ 1.04
CSTF3-206ENST00000524827 TMEM131LA2VDJ0 1609 aa21.54■■□□□ 1.04
CSTF3-206ENST00000524827 PHLPP1O60346 1717 aa21.53■■□□□ 1.04
CSTF3-206ENST00000524827 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
CSTF3-206ENST00000524827 SLAIN2Q9P270 581 aa21.52■■□□□ 1.04
CSTF3-206ENST00000524827 JCADQ9P266 1359 aa21.49■■□□□ 1.03
CSTF3-206ENST00000524827 UNC13BO14795 1591 aa21.49■■□□□ 1.03
CSTF3-206ENST00000524827 HDGFP51858 240 aaKnown RBP21.48■■□□□ 1.03
CSTF3-206ENST00000524827 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
CSTF3-206ENST00000524827 TBX22Q9Y458 520 aa21.46■■□□□ 1.03
CSTF3-206ENST00000524827 NCOA3Q9Y6Q9 1424 aa21.46■■□□□ 1.03
CSTF3-206ENST00000524827 E9PCH4 1651 aa21.45■■□□□ 1.02
CSTF3-206ENST00000524827 SETD1AO15047 1707 aaKnown RBP21.45■■□□□ 1.02
CSTF3-206ENST00000524827 ADAMTS13Q76LX8 1427 aa21.45■■□□□ 1.02
CSTF3-206ENST00000524827 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
CSTF3-206ENST00000524827 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
CSTF3-206ENST00000524827 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
CSTF3-206ENST00000524827 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
CSTF3-206ENST00000524827 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
CSTF3-206ENST00000524827 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
CSTF3-206ENST00000524827 LRP6O75581 1613 aa21.4■■□□□ 1.02
CSTF3-206ENST00000524827 IQGAP3Q86VI3 1631 aa21.4■■□□□ 1.02
CSTF3-206ENST00000524827 PIK3R4Q99570 1358 aa21.39■■□□□ 1.02
CSTF3-206ENST00000524827 AHDC1Q5TGY3 1603 aaPredicted RBP21.39■■□□□ 1.01
CSTF3-206ENST00000524827 CADPS2Q86UW7 1296 aa21.38■■□□□ 1.01
CSTF3-206ENST00000524827 ROCK1Q13464 1354 aa21.37■■□□□ 1.01
CSTF3-206ENST00000524827 SPATA31A6Q5VVP1 1343 aa21.37■■□□□ 1.01
CSTF3-206ENST00000524827 TRPM2O94759 1503 aa21.37■■□□□ 1.01
CSTF3-206ENST00000524827 C19orf44Q9H6X5 657 aa21.36■■□□□ 1.01
CSTF3-206ENST00000524827 SHPRHQ149N8 1683 aa21.35■■□□□ 1.01
CSTF3-206ENST00000524827 ATF3P18847 181 aa21.35■■□□□ 1.01
CSTF3-206ENST00000524827 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
CSTF3-206ENST00000524827 MEX3CQ5U5Q3 659 aaKnown RBP21.33■■□□□ 1.01
CSTF3-206ENST00000524827 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
CSTF3-206ENST00000524827 NUP155O75694 1391 aa21.32■■□□□ 1
CSTF3-206ENST00000524827 NRXN3Q9Y4C0 1643 aa21.3■■□□□ 1
CSTF3-206ENST00000524827 ZNF772Q68DY9 489 aaPredicted RBP21.3■■□□□ 1
CSTF3-206ENST00000524827 BRINP3Q76B58 766 aa21.3■■□□□ 1
CSTF3-206ENST00000524827 DCCP43146 1447 aa21.29■■□□□ 1
CSTF3-206ENST00000524827 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
CSTF3-206ENST00000524827 SETBP1Q9Y6X0 1596 aa21.27■■□□□ 1
CSTF3-206ENST00000524827 ASXL1Q8IXJ9 1541 aa21.27■■□□□ 1
CSTF3-206ENST00000524827 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
CSTF3-206ENST00000524827 TRIM52Q96A61 297 aa21.25■□□□□ 0.99
CSTF3-206ENST00000524827 MST1RQ04912 1400 aa21.24■□□□□ 0.99
CSTF3-206ENST00000524827 ITGAEP38570 1179 aa21.24■□□□□ 0.99
CSTF3-206ENST00000524827 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
CSTF3-206ENST00000524827 NUTM2BA6NNL0 878 aaPredicted RBP21.22■□□□□ 0.99
CSTF3-206ENST00000524827 NUTM2EB1AL46 878 aaPredicted RBP21.22■□□□□ 0.99
CSTF3-206ENST00000524827 NUTM2AQ8IVF1 878 aaPredicted RBP21.22■□□□□ 0.99
CSTF3-206ENST00000524827 UPF1Q92900 1129 aaKnown RBP eCLIP21.22■□□□□ 0.99
CSTF3-206ENST00000524827 METP08581 1390 aa21.22■□□□□ 0.99
CSTF3-206ENST00000524827 SETD5Q9C0A6 1442 aa21.21■□□□□ 0.99
CSTF3-206ENST00000524827 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
CSTF3-206ENST00000524827 RXRBP28702 533 aa21.19■□□□□ 0.98
CSTF3-206ENST00000524827 ADGRL3Q9HAR2 1447 aa21.19■□□□□ 0.98
CSTF3-206ENST00000524827 CDK12Q9NYV4 1490 aaPredicted RBP21.19■□□□□ 0.98
CSTF3-206ENST00000524827 AFF2P51816 1311 aa21.18■□□□□ 0.98
CSTF3-206ENST00000524827 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
CSTF3-206ENST00000524827 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
CSTF3-206ENST00000524827 CLTCL1P53675 1640 aa21.16■□□□□ 0.98
CSTF3-206ENST00000524827 DDX17Q92841 729 aaKnown RBP21.14■□□□□ 0.97
CSTF3-206ENST00000524827 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
CSTF3-206ENST00000524827 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
CSTF3-206ENST00000524827 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
CSTF3-206ENST00000524827 C8orf37Q96NL8 207 aa21.1■□□□□ 0.97
CSTF3-206ENST00000524827 KIF1BO60333 1816 aa21.09■□□□□ 0.97
CSTF3-206ENST00000524827 C1orf167Q5SNV9 1468 aa21.09■□□□□ 0.97
CSTF3-206ENST00000524827 RGS12O14924 1447 aa21.09■□□□□ 0.97
CSTF3-206ENST00000524827 PTCH1Q13635 1447 aa21.08■□□□□ 0.97
CSTF3-206ENST00000524827 LAMC1P11047 1609 aa21.07■□□□□ 0.96
CSTF3-206ENST00000524827 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
CSTF3-206ENST00000524827 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
CSTF3-206ENST00000524827 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
CSTF3-206ENST00000524827 NAIPQ13075 1403 aa21.04■□□□□ 0.96
CSTF3-206ENST00000524827 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
CSTF3-206ENST00000524827 ADAMTS2O95450 1211 aa21.02■□□□□ 0.96
CSTF3-206ENST00000524827 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
CSTF3-206ENST00000524827 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
CSTF3-206ENST00000524827 VGFO15240 615 aaPredicted RBP21■□□□□ 0.95
CSTF3-206ENST00000524827 ORAI2Q96SN7 254 aa21■□□□□ 0.95
CSTF3-206ENST00000524827 RRBP1Q9P2E9 1410 aaKnown RBP21■□□□□ 0.95
CSTF3-206ENST00000524827 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
CSTF3-206ENST00000524827 PPLO60437 1756 aa20.96■□□□□ 0.95
CSTF3-206ENST00000524827 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
CSTF3-206ENST00000524827 USP21Q9UK80 565 aa20.95■□□□□ 0.94
CSTF3-206ENST00000524827 COL22A1Q8NFW1 1626 aaPredicted RBP20.95■□□□□ 0.94
CSTF3-206ENST00000524827 CDC42BPGQ6DT37 1551 aa20.93■□□□□ 0.94
CSTF3-206ENST00000524827 ATAD2Q6PL18 1390 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms