RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
SPARC-206ENST00000524277 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
SPARC-206ENST00000524277 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
SPARC-206ENST00000524277 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
SPARC-206ENST00000524277 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
SPARC-206ENST00000524277 TBX22Q9Y458 520 aa18.08■□□□□ 0.48
SPARC-206ENST00000524277 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
SPARC-206ENST00000524277 NUP155O75694 1391 aa18.07■□□□□ 0.48
SPARC-206ENST00000524277 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
SPARC-206ENST00000524277 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
SPARC-206ENST00000524277 ITGAEP38570 1179 aa18.04■□□□□ 0.48
SPARC-206ENST00000524277 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
SPARC-206ENST00000524277 IQGAP3Q86VI3 1631 aa18.04■□□□□ 0.48
SPARC-206ENST00000524277 NCOA3Q9Y6Q9 1424 aa18.04■□□□□ 0.48
SPARC-206ENST00000524277 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
SPARC-206ENST00000524277 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
SPARC-206ENST00000524277 MSH6P52701 1360 aa18.03■□□□□ 0.48
SPARC-206ENST00000524277 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
SPARC-206ENST00000524277 E9PCH4 1651 aa18■□□□□ 0.47
SPARC-206ENST00000524277 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
SPARC-206ENST00000524277 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
SPARC-206ENST00000524277 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
SPARC-206ENST00000524277 CHD2O14647 1828 aaKnown RBP17.97■□□□□ 0.47
SPARC-206ENST00000524277 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
SPARC-206ENST00000524277 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
SPARC-206ENST00000524277 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
SPARC-206ENST00000524277 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
SPARC-206ENST00000524277 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
SPARC-206ENST00000524277 C19orf44Q9H6X5 657 aa17.94■□□□□ 0.46
SPARC-206ENST00000524277 NUTM2DQ5VT03 806 aaPredicted RBP17.93■□□□□ 0.46
SPARC-206ENST00000524277 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
SPARC-206ENST00000524277 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
SPARC-206ENST00000524277 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
SPARC-206ENST00000524277 AMOTL2Q9Y2J4 779 aa17.91■□□□□ 0.46
SPARC-206ENST00000524277 TRPM2O94759 1503 aa17.9■□□□□ 0.46
SPARC-206ENST00000524277 ATF3P18847 181 aa17.9■□□□□ 0.46
SPARC-206ENST00000524277 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
SPARC-206ENST00000524277 JCADQ9P266 1359 aa17.88■□□□□ 0.45
SPARC-206ENST00000524277 NAIPQ13075 1403 aa17.88■□□□□ 0.45
SPARC-206ENST00000524277 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
SPARC-206ENST00000524277 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
SPARC-206ENST00000524277 SETBP1Q9Y6X0 1596 aa17.85■□□□□ 0.45
SPARC-206ENST00000524277 DCCP43146 1447 aa17.84■□□□□ 0.45
SPARC-206ENST00000524277 PTPRUQ92729 1446 aa17.83■□□□□ 0.45
SPARC-206ENST00000524277 VGFO15240 615 aaPredicted RBP17.83■□□□□ 0.44
SPARC-206ENST00000524277 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
SPARC-206ENST00000524277 HFM1A2PYH4 1435 aa17.82■□□□□ 0.44
SPARC-206ENST00000524277 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
SPARC-206ENST00000524277 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
SPARC-206ENST00000524277 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
SPARC-206ENST00000524277 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
SPARC-206ENST00000524277 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
SPARC-206ENST00000524277 METP08581 1390 aa17.79■□□□□ 0.44
SPARC-206ENST00000524277 NRXN3Q9Y4C0 1643 aa17.78■□□□□ 0.44
SPARC-206ENST00000524277 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
SPARC-206ENST00000524277 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
SPARC-206ENST00000524277 AHDC1Q5TGY3 1603 aaPredicted RBP17.77■□□□□ 0.44
SPARC-206ENST00000524277 POTEAQ6S8J7 498 aa17.77■□□□□ 0.44
SPARC-206ENST00000524277 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SPARC-206ENST00000524277 XRN1Q8IZH2 1706 aaKnown RBP17.77■□□□□ 0.44
SPARC-206ENST00000524277 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
SPARC-206ENST00000524277 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
SPARC-206ENST00000524277 KIF1BO60333 1816 aa17.76■□□□□ 0.43
SPARC-206ENST00000524277 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
SPARC-206ENST00000524277 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
SPARC-206ENST00000524277 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
SPARC-206ENST00000524277 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
SPARC-206ENST00000524277 MST1RQ04912 1400 aa17.72■□□□□ 0.43
SPARC-206ENST00000524277 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
SPARC-206ENST00000524277 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
SPARC-206ENST00000524277 ASXL1Q8IXJ9 1541 aa17.69■□□□□ 0.42
SPARC-206ENST00000524277 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
SPARC-206ENST00000524277 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
SPARC-206ENST00000524277 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
SPARC-206ENST00000524277 LRP6O75581 1613 aa17.65■□□□□ 0.42
SPARC-206ENST00000524277 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
SPARC-206ENST00000524277 ANKRD30BQ9BXX2 1392 aa17.64■□□□□ 0.41
SPARC-206ENST00000524277 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
SPARC-206ENST00000524277 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
SPARC-206ENST00000524277 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
SPARC-206ENST00000524277 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
SPARC-206ENST00000524277 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
SPARC-206ENST00000524277 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
SPARC-206ENST00000524277 RXRBP28702 533 aa17.61■□□□□ 0.41
SPARC-206ENST00000524277 FOXD1Q16676 465 aa17.61■□□□□ 0.41
SPARC-206ENST00000524277 PPLO60437 1756 aa17.61■□□□□ 0.41
SPARC-206ENST00000524277 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
SPARC-206ENST00000524277 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
SPARC-206ENST00000524277 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
SPARC-206ENST00000524277 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
SPARC-206ENST00000524277 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
SPARC-206ENST00000524277 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
SPARC-206ENST00000524277 ADGRF5Q8IZF2 1346 aa17.58■□□□□ 0.4
SPARC-206ENST00000524277 AFF2P51816 1311 aa17.57■□□□□ 0.4
SPARC-206ENST00000524277 ORAI2Q96SN7 254 aa17.57■□□□□ 0.4
SPARC-206ENST00000524277 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
SPARC-206ENST00000524277 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
SPARC-206ENST00000524277 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
SPARC-206ENST00000524277 LAMC1P11047 1609 aa17.56■□□□□ 0.4
SPARC-206ENST00000524277 TECPR2O15040 1411 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms