RNA–Protein interactions for RNA: ENST00000524215.5

RUNX1T1-247, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-247ENST00000524215 IDI1Q13907 227 aa13.92□□□□□ -0.18
RUNX1T1-247ENST00000524215 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
RUNX1T1-247ENST00000524215 NUP155O75694 1391 aa13.92□□□□□ -0.18
RUNX1T1-247ENST00000524215 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
RUNX1T1-247ENST00000524215 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
RUNX1T1-247ENST00000524215 BCANQ96GW7 911 aa13.89□□□□□ -0.19
RUNX1T1-247ENST00000524215 E9PCH4 1651 aa13.88□□□□□ -0.19
RUNX1T1-247ENST00000524215 LTKP29376 864 aa13.88□□□□□ -0.19
RUNX1T1-247ENST00000524215 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
RUNX1T1-247ENST00000524215 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
RUNX1T1-247ENST00000524215 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
RUNX1T1-247ENST00000524215 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
RUNX1T1-247ENST00000524215 TMEM131LA2VDJ0 1609 aa13.84□□□□□ -0.19
RUNX1T1-247ENST00000524215 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
RUNX1T1-247ENST00000524215 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
RUNX1T1-247ENST00000524215 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
RUNX1T1-247ENST00000524215 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.2
RUNX1T1-247ENST00000524215 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
RUNX1T1-247ENST00000524215 NAIPQ13075 1403 aa13.82□□□□□ -0.2
RUNX1T1-247ENST00000524215 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
RUNX1T1-247ENST00000524215 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
RUNX1T1-247ENST00000524215 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
RUNX1T1-247ENST00000524215 KCNA6P17658 529 aa13.8□□□□□ -0.2
RUNX1T1-247ENST00000524215 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
RUNX1T1-247ENST00000524215 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
RUNX1T1-247ENST00000524215 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
RUNX1T1-247ENST00000524215 TRPM2O94759 1503 aa13.77□□□□□ -0.21
RUNX1T1-247ENST00000524215 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
RUNX1T1-247ENST00000524215 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
RUNX1T1-247ENST00000524215 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
RUNX1T1-247ENST00000524215 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
RUNX1T1-247ENST00000524215 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
RUNX1T1-247ENST00000524215 MSH6P52701 1360 aa13.75□□□□□ -0.21
RUNX1T1-247ENST00000524215 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
RUNX1T1-247ENST00000524215 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
RUNX1T1-247ENST00000524215 TBX22Q9Y458 520 aa13.75□□□□□ -0.21
RUNX1T1-247ENST00000524215 KIF1BO60333 1816 aa13.74□□□□□ -0.21
RUNX1T1-247ENST00000524215 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
RUNX1T1-247ENST00000524215 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
RUNX1T1-247ENST00000524215 CHD2O14647 1828 aaKnown RBP13.73□□□□□ -0.21
RUNX1T1-247ENST00000524215 CLTCL1P53675 1640 aa13.72□□□□□ -0.21
RUNX1T1-247ENST00000524215 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
RUNX1T1-247ENST00000524215 NUTM2DQ5VT03 806 aaPredicted RBP13.71□□□□□ -0.21
RUNX1T1-247ENST00000524215 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
RUNX1T1-247ENST00000524215 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
RUNX1T1-247ENST00000524215 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
RUNX1T1-247ENST00000524215 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
RUNX1T1-247ENST00000524215 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
RUNX1T1-247ENST00000524215 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
RUNX1T1-247ENST00000524215 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
RUNX1T1-247ENST00000524215 RPGRIP1LQ68CZ1 1315 aa13.65□□□□□ -0.22
RUNX1T1-247ENST00000524215 ATF3P18847 181 aa13.65□□□□□ -0.22
RUNX1T1-247ENST00000524215 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
RUNX1T1-247ENST00000524215 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
RUNX1T1-247ENST00000524215 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
RUNX1T1-247ENST00000524215 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
RUNX1T1-247ENST00000524215 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
RUNX1T1-247ENST00000524215 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
RUNX1T1-247ENST00000524215 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
RUNX1T1-247ENST00000524215 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
RUNX1T1-247ENST00000524215 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
RUNX1T1-247ENST00000524215 DCCP43146 1447 aa13.62□□□□□ -0.23
RUNX1T1-247ENST00000524215 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
RUNX1T1-247ENST00000524215 PPLO60437 1756 aa13.6□□□□□ -0.23
RUNX1T1-247ENST00000524215 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
RUNX1T1-247ENST00000524215 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
RUNX1T1-247ENST00000524215 METP08581 1390 aa13.58□□□□□ -0.23
RUNX1T1-247ENST00000524215 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.23
RUNX1T1-247ENST00000524215 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
RUNX1T1-247ENST00000524215 FOXD1Q16676 465 aa13.57□□□□□ -0.24
RUNX1T1-247ENST00000524215 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
RUNX1T1-247ENST00000524215 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
RUNX1T1-247ENST00000524215 JCADQ9P266 1359 aa13.55□□□□□ -0.24
RUNX1T1-247ENST00000524215 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
RUNX1T1-247ENST00000524215 SPATA31E1Q6ZUB1 1445 aa13.54□□□□□ -0.24
RUNX1T1-247ENST00000524215 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
RUNX1T1-247ENST00000524215 YY1P25490 414 aa13.53□□□□□ -0.24
RUNX1T1-247ENST00000524215 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
RUNX1T1-247ENST00000524215 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
RUNX1T1-247ENST00000524215 IFT172Q9UG01 1749 aa13.53□□□□□ -0.24
RUNX1T1-247ENST00000524215 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
RUNX1T1-247ENST00000524215 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
RUNX1T1-247ENST00000524215 LRP5O75197 1615 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 LAMC1P11047 1609 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 MST1RQ04912 1400 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
RUNX1T1-247ENST00000524215 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
RUNX1T1-247ENST00000524215 HRCP23327 699 aa13.49□□□□□ -0.25
RUNX1T1-247ENST00000524215 PIK3C2GO75747 1445 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 ROBO2Q9HCK4 1378 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 RXRBP28702 533 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 MYOM2P54296 1465 aa13.48□□□□□ -0.25
RUNX1T1-247ENST00000524215 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
RUNX1T1-247ENST00000524215 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms