RNA–Protein interactions for RNA: ENST00000524040.5

PTK2-254, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-254	ENST00000524040	MSH6	P52701	1360 aa		28.52	■■■□□ 2.16
PTK2-254	ENST00000524040	NWD1	Q149M9	1564 aa		28.51	■■■□□ 2.15
PTK2-254	ENST00000524040	PPP1R15A	O75807	674 aa	Predicted RBP	28.51	■■■□□ 2.15
PTK2-254	ENST00000524040	MYO5B	Q9ULV0	1848 aa		28.5	■■■□□ 2.15
PTK2-254	ENST00000524040	ADGRL2	O95490	1459 aa		28.49	■■■□□ 2.15
PTK2-254	ENST00000524040	GCC2	Q8IWJ2	1684 aa		28.48	■■■□□ 2.15
PTK2-254	ENST00000524040	POTEA	Q6S8J7	498 aa		28.48	■■■□□ 2.15
PTK2-254	ENST00000524040	ANKRD50	Q9ULJ7	1429 aa		28.47	■■■□□ 2.15
PTK2-254	ENST00000524040	RPRD2	Q5VT52	1461 aa	Known RBP	28.46	■■■□□ 2.15
PTK2-254	ENST00000524040	CHGA	P10645	457 aa	Known RBP	28.46	■■■□□ 2.15
PTK2-254	ENST00000524040	PHLPP1	O60346	1717 aa		28.46	■■■□□ 2.15
PTK2-254	ENST00000524040	HDGF	P51858	240 aa	Known RBP	28.44	■■■□□ 2.14
PTK2-254	ENST00000524040	SLAIN2	Q9P270	581 aa		28.44	■■■□□ 2.14
PTK2-254	ENST00000524040	RIMS2	Q9UQ26	1411 aa		28.43	■■■□□ 2.14
PTK2-254	ENST00000524040	PLEKHG1	Q9ULL1	1385 aa		28.43	■■■□□ 2.14
PTK2-254	ENST00000524040	CHD2	O14647	1828 aa	Known RBP	28.43	■■■□□ 2.14
PTK2-254	ENST00000524040	ZFYVE9	O95405	1425 aa		28.42	■■■□□ 2.14
PTK2-254	ENST00000524040	C14orf37	Q86TY3	774 aa		28.41	■■■□□ 2.14
PTK2-254	ENST00000524040	TMEM131L	A2VDJ0	1609 aa		28.39	■■■□□ 2.13
PTK2-254	ENST00000524040	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.38	■■■□□ 2.13
PTK2-254	ENST00000524040	JCAD	Q9P266	1359 aa		28.37	■■■□□ 2.13
PTK2-254	ENST00000524040	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.35	■■■□□ 2.13
PTK2-254	ENST00000524040	TBX22	Q9Y458	520 aa		28.33	■■■□□ 2.13
PTK2-254	ENST00000524040	UNC13B	O14795	1591 aa		28.33	■■■□□ 2.12
PTK2-254	ENST00000524040	SETD1A	O15047	1707 aa	Known RBP	28.32	■■■□□ 2.12
PTK2-254	ENST00000524040		E9PCH4	1651 aa		28.31	■■■□□ 2.12
PTK2-254	ENST00000524040	COL16A1	Q07092	1604 aa	Predicted RBP	28.29	■■■□□ 2.12
PTK2-254	ENST00000524040	MEX3C	Q5U5Q3	659 aa	Known RBP	28.28	■■■□□ 2.12
PTK2-254	ENST00000524040	ATF3	P18847	181 aa		28.27	■■■□□ 2.12
PTK2-254	ENST00000524040	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.26	■■■□□ 2.11
PTK2-254	ENST00000524040	ADAMTS13	Q76LX8	1427 aa		28.26	■■■□□ 2.11
PTK2-254	ENST00000524040	NCOA3	Q9Y6Q9	1424 aa		28.26	■■■□□ 2.11
PTK2-254	ENST00000524040	DIP2A	Q14689	1571 aa		28.25	■■■□□ 2.11
PTK2-254	ENST00000524040	CADPS2	Q86UW7	1296 aa		28.24	■■■□□ 2.11
PTK2-254	ENST00000524040	C19orf44	Q9H6X5	657 aa		28.23	■■■□□ 2.11
PTK2-254	ENST00000524040	IQGAP3	Q86VI3	1631 aa		28.22	■■■□□ 2.11
PTK2-254	ENST00000524040	SPATA31A6	Q5VVP1	1343 aa		28.21	■■■□□ 2.11
PTK2-254	ENST00000524040	ITGAE	P38570	1179 aa		28.21	■■■□□ 2.11
PTK2-254	ENST00000524040	LRP6	O75581	1613 aa		28.21	■■■□□ 2.11
PTK2-254	ENST00000524040	TRPM2	O94759	1503 aa		28.2	■■■□□ 2.1
PTK2-254	ENST00000524040	PIK3R4	Q99570	1358 aa		28.2	■■■□□ 2.1
PTK2-254	ENST00000524040	AMOTL2	Q9Y2J4	779 aa		28.19	■■■□□ 2.1
PTK2-254	ENST00000524040	NUP155	O75694	1391 aa		28.19	■■■□□ 2.1
PTK2-254	ENST00000524040	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.18	■■■□□ 2.1
PTK2-254	ENST00000524040	ROCK1	Q13464	1354 aa		28.17	■■■□□ 2.1
PTK2-254	ENST00000524040	ZNF772	Q68DY9	489 aa	Predicted RBP	28.16	■■■□□ 2.1
PTK2-254	ENST00000524040	TRIM52	Q96A61	297 aa		28.16	■■■□□ 2.1
PTK2-254	ENST00000524040	SHPRH	Q149N8	1683 aa		28.16	■■■□□ 2.1
PTK2-254	ENST00000524040	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.14	■■■□□ 2.1
PTK2-254	ENST00000524040	NUTM2E	B1AL46	878 aa	Predicted RBP	28.14	■■■□□ 2.1
PTK2-254	ENST00000524040	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.14	■■■□□ 2.1
PTK2-254	ENST00000524040	PTPRU	Q92729	1446 aa		28.13	■■■□□ 2.09
PTK2-254	ENST00000524040	ZNF326	Q5BKZ1	582 aa	Known RBP	28.12	■■■□□ 2.09
PTK2-254	ENST00000524040	BRINP3	Q76B58	766 aa		28.12	■■■□□ 2.09
PTK2-254	ENST00000524040	SPHKAP	Q2M3C7	1700 aa		28.07	■■■□□ 2.08
PTK2-254	ENST00000524040	NRXN3	Q9Y4C0	1643 aa		28.05	■■■□□ 2.08
PTK2-254	ENST00000524040	XRN1	Q8IZH2	1706 aa	Known RBP	28.04	■■■□□ 2.08
PTK2-254	ENST00000524040	ASXL1	Q8IXJ9	1541 aa		28.04	■■■□□ 2.08
PTK2-254	ENST00000524040	DCC	P43146	1447 aa		28.04	■■■□□ 2.08
PTK2-254	ENST00000524040	RXRB	P28702	533 aa		28.04	■■■□□ 2.08
PTK2-254	ENST00000524040	PPARGC1B	Q86YN6	1023 aa	Known RBP	28.04	■■■□□ 2.08
PTK2-254	ENST00000524040	SETBP1	Q9Y6X0	1596 aa		28.03	■■■□□ 2.08
PTK2-254	ENST00000524040	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
PTK2-254	ENST00000524040	MST1R	Q04912	1400 aa		28	■■■□□ 2.07
PTK2-254	ENST00000524040	MET	P08581	1390 aa		27.99	■■■□□ 2.07
PTK2-254	ENST00000524040	AFF2	P51816	1311 aa		27.98	■■■□□ 2.07
PTK2-254	ENST00000524040	NHSL1	Q5SYE7	1610 aa		27.98	■■■□□ 2.07
PTK2-254	ENST00000524040	DDX17	Q92841	729 aa	Known RBP	27.96	■■■□□ 2.07
PTK2-254	ENST00000524040	LRRC59	Q96AG4	307 aa	Known RBP	27.96	■■■□□ 2.07
PTK2-254	ENST00000524040	SETD5	Q9C0A6	1442 aa		27.95	■■■□□ 2.07
PTK2-254	ENST00000524040	C8orf37	Q96NL8	207 aa		27.93	■■■□□ 2.06
PTK2-254	ENST00000524040	ADGRL3	Q9HAR2	1447 aa		27.92	■■■□□ 2.06
PTK2-254	ENST00000524040	CLTCL1	P53675	1640 aa		27.92	■■■□□ 2.06
PTK2-254	ENST00000524040	NALCN	Q8IZF0	1738 aa		27.92	■■■□□ 2.06
PTK2-254	ENST00000524040	NEXMIF	Q5QGS0	1516 aa		27.9	■■■□□ 2.06
PTK2-254	ENST00000524040	KIF1B	O60333	1816 aa		27.9	■■■□□ 2.06
PTK2-254	ENST00000524040	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.89	■■■□□ 2.05
PTK2-254	ENST00000524040	PNPLA6	Q8IY17	1366 aa		27.86	■■■□□ 2.05
PTK2-254	ENST00000524040	QTRT2	Q9H974	415 aa	Known RBP	27.86	■■■□□ 2.05
PTK2-254	ENST00000524040	ADAMTS2	O95450	1211 aa		27.84	■■■□□ 2.05
PTK2-254	ENST00000524040	RBM6	P78332	1123 aa	Known RBP	27.82	■■■□□ 2.04
PTK2-254	ENST00000524040	NGLY1	Q96IV0	654 aa		27.82	■■■□□ 2.04
PTK2-254	ENST00000524040	C1orf167	Q5SNV9	1468 aa		27.82	■■■□□ 2.04
PTK2-254	ENST00000524040	RGS12	O14924	1447 aa		27.81	■■■□□ 2.04
PTK2-254	ENST00000524040	VGF	O15240	615 aa	Predicted RBP	27.78	■■■□□ 2.04
PTK2-254	ENST00000524040	ORAI2	Q96SN7	254 aa		27.77	■■■□□ 2.04
PTK2-254	ENST00000524040	PTCH1	Q13635	1447 aa		27.75	■■■□□ 2.03
PTK2-254	ENST00000524040	ROBO2	Q9HCK4	1378 aa		27.75	■■■□□ 2.03
PTK2-254	ENST00000524040	NAIP	Q13075	1403 aa		27.74	■■■□□ 2.03
PTK2-254	ENST00000524040	USP21	Q9UK80	565 aa		27.71	■■■□□ 2.03
PTK2-254	ENST00000524040	LAMC1	P11047	1609 aa		27.7	■■■□□ 2.03
PTK2-254	ENST00000524040	SOS2	Q07890	1332 aa	Predicted RBP	27.7	■■■□□ 2.03
PTK2-254	ENST00000524040	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.68	■■■□□ 2.02
PTK2-254	ENST00000524040	HFM1	A2PYH4	1435 aa		27.67	■■■□□ 2.02
PTK2-254	ENST00000524040	RRBP1	Q9P2E9	1410 aa	Known RBP	27.67	■■■□□ 2.02
PTK2-254	ENST00000524040	RPGRIP1L	Q68CZ1	1315 aa		27.67	■■■□□ 2.02
PTK2-254	ENST00000524040	PPL	O60437	1756 aa		27.66	■■■□□ 2.02
PTK2-254	ENST00000524040	ESCO1	Q5FWF5	840 aa		27.65	■■■□□ 2.02
PTK2-254	ENST00000524040	TRPC5	Q9UL62	973 aa	Predicted RBP	27.65	■■■□□ 2.02
PTK2-254	ENST00000524040	ATAD2	Q6PL18	1390 aa		27.64	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms