RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 STAC3Q96MF2 364 aa7.87□□□□□ -1.15
SKP1-212ENST00000523966 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
SKP1-212ENST00000523966 SKIV2LQ15477 1246 aaKnown RBP7.86□□□□□ -1.15
SKP1-212ENST00000523966 NUTM1Q86Y26 1132 aa7.86□□□□□ -1.15
SKP1-212ENST00000523966 TMEM134Q9H6X4 195 aa7.86□□□□□ -1.15
SKP1-212ENST00000523966 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
SKP1-212ENST00000523966 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
SKP1-212ENST00000523966 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
SKP1-212ENST00000523966 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
SKP1-212ENST00000523966 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
SKP1-212ENST00000523966 SEPT9Q9UHD8 586 aaPredicted RBP7.84□□□□□ -1.15
SKP1-212ENST00000523966 VPS9D1Q9Y2B5 631 aa7.84□□□□□ -1.15
SKP1-212ENST00000523966 C3orf80F5H4A9 247 aa7.83□□□□□ -1.16
SKP1-212ENST00000523966 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
SKP1-212ENST00000523966 CD46P15529 392 aa7.82□□□□□ -1.16
SKP1-212ENST00000523966 SWT1Q5T5J6 900 aaKnown RBP7.82□□□□□ -1.16
SKP1-212ENST00000523966 LAPTM4BQ86VI4 370 aa7.82□□□□□ -1.16
SKP1-212ENST00000523966 GOLGA8CPA6NN73 597 aa7.81□□□□□ -1.16
SKP1-212ENST00000523966 TK2O00142 265 aa7.81□□□□□ -1.16
SKP1-212ENST00000523966 POTEEQ6S8J3 1075 aa7.81□□□□□ -1.16
SKP1-212ENST00000523966 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
SKP1-212ENST00000523966 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
SKP1-212ENST00000523966 RNF40O75150 1001 aa7.8□□□□□ -1.16
SKP1-212ENST00000523966 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
SKP1-212ENST00000523966 MYSM1Q5VVJ2 828 aa7.8□□□□□ -1.16
SKP1-212ENST00000523966 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
SKP1-212ENST00000523966 FLIIQ13045 1269 aa7.79□□□□□ -1.16
SKP1-212ENST00000523966 RIC3Q7Z5B4 369 aa7.79□□□□□ -1.16
SKP1-212ENST00000523966 SPIRE2Q8WWL2 714 aa7.79□□□□□ -1.16
SKP1-212ENST00000523966 NECTIN2Q92692 538 aa7.79□□□□□ -1.16
SKP1-212ENST00000523966 KDM4AO75164 1064 aa7.78□□□□□ -1.16
SKP1-212ENST00000523966 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
SKP1-212ENST00000523966 USP46P62068 366 aa7.77□□□□□ -1.17
SKP1-212ENST00000523966 GRIPAP1Q4V328 841 aa7.77□□□□□ -1.17
SKP1-212ENST00000523966 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
SKP1-212ENST00000523966 SAMD7Q7Z3H4 446 aa7.77□□□□□ -1.17
SKP1-212ENST00000523966 PROCA1Q8NCQ7 364 aaPredicted RBP7.77□□□□□ -1.17
SKP1-212ENST00000523966 GCGRP47871 477 aa7.76□□□□□ -1.17
SKP1-212ENST00000523966 LRCH3Q96II8 777 aa7.76□□□□□ -1.17
SKP1-212ENST00000523966 ZFRQ96KR1 1074 aaKnown RBP7.76□□□□□ -1.17
SKP1-212ENST00000523966 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
SKP1-212ENST00000523966 BHMG1C9JSJ3 638 aaPredicted RBP7.75□□□□□ -1.17
SKP1-212ENST00000523966 KMT5BQ4FZB7 885 aa7.75□□□□□ -1.17
SKP1-212ENST00000523966 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
SKP1-212ENST00000523966 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
SKP1-212ENST00000523966 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
SKP1-212ENST00000523966 SPTLC1O15269 473 aa7.74□□□□□ -1.17
SKP1-212ENST00000523966 CSPP1Q1MSJ5 1256 aa7.74□□□□□ -1.17
SKP1-212ENST00000523966 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
SKP1-212ENST00000523966 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
SKP1-212ENST00000523966 ANKK1Q8NFD2 765 aa7.74□□□□□ -1.17
SKP1-212ENST00000523966 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
SKP1-212ENST00000523966 MOXD2PA6NHM9 499 aa7.73□□□□□ -1.17
SKP1-212ENST00000523966 GJA5P36382 358 aa7.73□□□□□ -1.17
SKP1-212ENST00000523966 RSBN1LQ6PCB5 846 aaPredicted RBP7.73□□□□□ -1.17
SKP1-212ENST00000523966 CFHP08603 1231 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 SLC10A3P09131 477 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 NDUFV2P19404 249 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.72□□□□□ -1.17
SKP1-212ENST00000523966 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 ZMYND15Q9H091 742 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 LIMD1Q9UGP4 676 aa7.72□□□□□ -1.17
SKP1-212ENST00000523966 FDX1P10109 184 aa7.71□□□□□ -1.18
SKP1-212ENST00000523966 PPP4CP60510 307 aa7.71□□□□□ -1.18
SKP1-212ENST00000523966 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
SKP1-212ENST00000523966 HOXA2O43364 376 aa7.7□□□□□ -1.18
SKP1-212ENST00000523966 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
SKP1-212ENST00000523966 HRO43593 1189 aa7.69□□□□□ -1.18
SKP1-212ENST00000523966 UBTFP17480 764 aaKnown RBP7.69□□□□□ -1.18
SKP1-212ENST00000523966 ATP6V1AP38606 617 aa7.69□□□□□ -1.18
SKP1-212ENST00000523966 RFC5P40937 340 aa7.69□□□□□ -1.18
SKP1-212ENST00000523966 WNT2BQ93097 391 aa7.69□□□□□ -1.18
SKP1-212ENST00000523966 ZBTB3Q9H5J0 574 aa7.69□□□□□ -1.18
SKP1-212ENST00000523966 RAD21O60216 631 aa7.68□□□□□ -1.18
SKP1-212ENST00000523966 FUT2Q10981 343 aa7.68□□□□□ -1.18
SKP1-212ENST00000523966 PRPF38BQ5VTL8 546 aaKnown RBP7.68□□□□□ -1.18
SKP1-212ENST00000523966 BANK1Q8NDB2 785 aa7.68□□□□□ -1.18
SKP1-212ENST00000523966 PPP2R2DQ66LE6 453 aa7.67□□□□□ -1.18
SKP1-212ENST00000523966 PRM3Q9NNZ6 103 aa7.67□□□□□ -1.18
SKP1-212ENST00000523966 SOWAHBA6NEL2 793 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 C6orf229H3BNL8 230 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 APBB1O00213 710 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 AP1G2O75843 785 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
SKP1-212ENST00000523966 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 PCDHB15Q9Y5E8 787 aa7.66□□□□□ -1.18
SKP1-212ENST00000523966 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
SKP1-212ENST00000523966 SUPT5HO00267 1087 aaKnown RBP7.65□□□□□ -1.18
SKP1-212ENST00000523966 ACTN4O43707 911 aaKnown RBP7.65□□□□□ -1.18
SKP1-212ENST00000523966 LILRB3O75022 631 aa7.65□□□□□ -1.18
SKP1-212ENST00000523966 MTMR2Q13614 643 aa7.65□□□□□ -1.18
SKP1-212ENST00000523966 QPCTQ16769 361 aa7.65□□□□□ -1.18
SKP1-212ENST00000523966 HRCP23327 699 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 BCAMP50895 628 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 MCM6Q14566 821 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 Q3C1V9 767 aa7.64□□□□□ -1.19
SKP1-212ENST00000523966 HELBQ8NG08 1087 aaPredicted RBP7.64□□□□□ -1.19
SKP1-212ENST00000523966 CABLES1Q8TDN4 633 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms