RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-240ENST00000523912 NUP155O75694 1391 aa13.47□□□□□ -0.25
CTNNA1-240ENST00000523912 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
CTNNA1-240ENST00000523912 RGS17Q9UGC6 210 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-240ENST00000523912 NKTRP30414 1462 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-240ENST00000523912 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
CTNNA1-240ENST00000523912 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
CTNNA1-240ENST00000523912 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-240ENST00000523912 PROSER2Q86WR7 435 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-240ENST00000523912 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTNNA1-240ENST00000523912 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
CTNNA1-240ENST00000523912 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
CTNNA1-240ENST00000523912 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
CTNNA1-240ENST00000523912 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-240ENST00000523912 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
CTNNA1-240ENST00000523912 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
CTNNA1-240ENST00000523912 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
CTNNA1-240ENST00000523912 MSH6P52701 1360 aa13.41□□□□□ -0.26
CTNNA1-240ENST00000523912 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-240ENST00000523912 E9PCH4 1651 aa13.39□□□□□ -0.27
CTNNA1-240ENST00000523912 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
CTNNA1-240ENST00000523912 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
CTNNA1-240ENST00000523912 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
CTNNA1-240ENST00000523912 TBX22Q9Y458 520 aa13.38□□□□□ -0.27
CTNNA1-240ENST00000523912 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
CTNNA1-240ENST00000523912 PIK3R4Q99570 1358 aa13.36□□□□□ -0.27
CTNNA1-240ENST00000523912 JCADQ9P266 1359 aa13.36□□□□□ -0.27
CTNNA1-240ENST00000523912 NAIPQ13075 1403 aa13.35□□□□□ -0.27
CTNNA1-240ENST00000523912 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
CTNNA1-240ENST00000523912 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-240ENST00000523912 HFM1A2PYH4 1435 aa13.34□□□□□ -0.27
CTNNA1-240ENST00000523912 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-240ENST00000523912 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-240ENST00000523912 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
CTNNA1-240ENST00000523912 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
CTNNA1-240ENST00000523912 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
CTNNA1-240ENST00000523912 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
CTNNA1-240ENST00000523912 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
CTNNA1-240ENST00000523912 TRPM2O94759 1503 aa13.31□□□□□ -0.28
CTNNA1-240ENST00000523912 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-240ENST00000523912 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
CTNNA1-240ENST00000523912 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
CTNNA1-240ENST00000523912 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
CTNNA1-240ENST00000523912 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CTNNA1-240ENST00000523912 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-240ENST00000523912 ZNF772Q68DY9 489 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-240ENST00000523912 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-240ENST00000523912 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-240ENST00000523912 ATF3P18847 181 aa13.27□□□□□ -0.29
CTNNA1-240ENST00000523912 DCCP43146 1447 aa13.27□□□□□ -0.29
CTNNA1-240ENST00000523912 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
CTNNA1-240ENST00000523912 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
CTNNA1-240ENST00000523912 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
CTNNA1-240ENST00000523912 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
CTNNA1-240ENST00000523912 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
CTNNA1-240ENST00000523912 RPGRIP1LQ68CZ1 1315 aa13.23□□□□□ -0.29
CTNNA1-240ENST00000523912 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
CTNNA1-240ENST00000523912 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
CTNNA1-240ENST00000523912 LRP6O75581 1613 aa13.22□□□□□ -0.29
CTNNA1-240ENST00000523912 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-240ENST00000523912 CDK12Q9NYV4 1490 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-240ENST00000523912 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
CTNNA1-240ENST00000523912 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-240ENST00000523912 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
CTNNA1-240ENST00000523912 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.3
CTNNA1-240ENST00000523912 SETD5Q9C0A6 1442 aa13.2□□□□□ -0.3
CTNNA1-240ENST00000523912 NRXN3Q9Y4C0 1643 aa13.2□□□□□ -0.3
CTNNA1-240ENST00000523912 KIF1BO60333 1816 aa13.2□□□□□ -0.3
CTNNA1-240ENST00000523912 METP08581 1390 aa13.2□□□□□ -0.3
CTNNA1-240ENST00000523912 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTNNA1-240ENST00000523912 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-240ENST00000523912 RXRBP28702 533 aa13.18□□□□□ -0.3
CTNNA1-240ENST00000523912 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
CTNNA1-240ENST00000523912 ADGRL3Q9HAR2 1447 aa13.17□□□□□ -0.3
CTNNA1-240ENST00000523912 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-240ENST00000523912 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-240ENST00000523912 MST1RQ04912 1400 aa13.16□□□□□ -0.3
CTNNA1-240ENST00000523912 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
CTNNA1-240ENST00000523912 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
CTNNA1-240ENST00000523912 FOXD1Q16676 465 aa13.15□□□□□ -0.3
CTNNA1-240ENST00000523912 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
CTNNA1-240ENST00000523912 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CTNNA1-240ENST00000523912 PRAG1Q86YV5 1406 aa13.13□□□□□ -0.31
CTNNA1-240ENST00000523912 AFF2P51816 1311 aa13.13□□□□□ -0.31
CTNNA1-240ENST00000523912 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-240ENST00000523912 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-240ENST00000523912 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-240ENST00000523912 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-240ENST00000523912 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
CTNNA1-240ENST00000523912 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
CTNNA1-240ENST00000523912 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
CTNNA1-240ENST00000523912 SPATA31E1Q6ZUB1 1445 aa13.1□□□□□ -0.31
CTNNA1-240ENST00000523912 PPLO60437 1756 aa13.09□□□□□ -0.31
CTNNA1-240ENST00000523912 LAMC1P11047 1609 aa13.09□□□□□ -0.31
CTNNA1-240ENST00000523912 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-240ENST00000523912 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
CTNNA1-240ENST00000523912 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
CTNNA1-240ENST00000523912 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
CTNNA1-240ENST00000523912 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
CTNNA1-240ENST00000523912 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms