RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 DSG2Q14126 1118 aa6.56□□□□□ -1.36
NPM1-210ENST00000523339 DENND4BO75064 1496 aaPredicted RBP6.55□□□□□ -1.36
NPM1-210ENST00000523339 GOLGA3Q08378 1498 aa6.55□□□□□ -1.36
NPM1-210ENST00000523339 NEO1Q92859 1461 aa6.55□□□□□ -1.36
NPM1-210ENST00000523339 KIAA0556O60303 1618 aa6.55□□□□□ -1.36
NPM1-210ENST00000523339 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
NPM1-210ENST00000523339 GPHNQ9NQX3 736 aaPredicted RBP6.55□□□□□ -1.36
NPM1-210ENST00000523339 ARHGAP33O14559 1287 aa6.54□□□□□ -1.36
NPM1-210ENST00000523339 HS6ST3Q8IZP7 471 aa6.54□□□□□ -1.36
NPM1-210ENST00000523339 UGGT2Q9NYU1 1516 aa6.54□□□□□ -1.36
NPM1-210ENST00000523339 PBX2P40425 430 aa6.53□□□□□ -1.36
NPM1-210ENST00000523339 PTGER2P43116 358 aa6.53□□□□□ -1.36
NPM1-210ENST00000523339 ARHGEF40Q8TER5 1519 aa6.52□□□□□ -1.37
NPM1-210ENST00000523339 HRO43593 1189 aa6.52□□□□□ -1.37
NPM1-210ENST00000523339 CHGAP10645 457 aaKnown RBP6.52□□□□□ -1.37
NPM1-210ENST00000523339 ADGRD1Q6QNK2 874 aa6.52□□□□□ -1.37
NPM1-210ENST00000523339 RAPGEF2Q9Y4G8 1499 aa6.52□□□□□ -1.37
NPM1-210ENST00000523339 PTPRTO14522 1441 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 ZFYVE16Q7Z3T8 1539 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 PLEKHD1A6NEE1 506 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 TOM1O60784 492 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 HSPA1LP34931 641 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 IQSEC2Q5JU85 1478 aa6.51□□□□□ -1.37
NPM1-210ENST00000523339 EFCAB5A4FU69 1503 aa6.5□□□□□ -1.37
NPM1-210ENST00000523339 PREX1Q8TCU6 1659 aa6.49□□□□□ -1.37
NPM1-210ENST00000523339 ABCA8O94911 1581 aa6.49□□□□□ -1.37
NPM1-210ENST00000523339 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
NPM1-210ENST00000523339 ZNF335Q9H4Z2 1342 aaPredicted RBP6.49□□□□□ -1.37
NPM1-210ENST00000523339 ATP10BO94823 1461 aa6.48□□□□□ -1.37
NPM1-210ENST00000523339 ABCA9Q8IUA7 1624 aa6.48□□□□□ -1.37
NPM1-210ENST00000523339 OXER1Q8TDS5 423 aa6.48□□□□□ -1.37
NPM1-210ENST00000523339 FER1L4A9Z1Z3 1794 aa6.48□□□□□ -1.37
NPM1-210ENST00000523339 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
NPM1-210ENST00000523339 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
NPM1-210ENST00000523339 UPF1Q92900 1129 aaKnown RBP eCLIP6.47□□□□□ -1.37
NPM1-210ENST00000523339 CRISPLD2Q9H0B8 497 aa6.47□□□□□ -1.37
NPM1-210ENST00000523339 FHOD3Q2V2M9 1422 aa6.47□□□□□ -1.37
NPM1-210ENST00000523339 FRMPD1Q5SYB0 1578 aa6.47□□□□□ -1.37
NPM1-210ENST00000523339 NCKAP5LQ9HCH0 1330 aa6.47□□□□□ -1.37
NPM1-210ENST00000523339 MAGI2Q86UL8 1455 aa6.47□□□□□ -1.37
NPM1-210ENST00000523339 TK2O00142 265 aa6.46□□□□□ -1.38
NPM1-210ENST00000523339 C9orf84Q5VXU9 1444 aa6.46□□□□□ -1.38
NPM1-210ENST00000523339 PLA2G2EQ9NZK7 142 aa6.46□□□□□ -1.38
NPM1-210ENST00000523339 LTBP4Q8N2S1 1624 aa6.46□□□□□ -1.38
NPM1-210ENST00000523339 ATP10AO60312 1499 aa6.46□□□□□ -1.38
NPM1-210ENST00000523339 SCAPERQ9BY12 1400 aa6.45□□□□□ -1.38
NPM1-210ENST00000523339 HCSTQ9UBK5 93 aa6.45□□□□□ -1.38
NPM1-210ENST00000523339 ATP1B4Q9UN42 357 aaPredicted RBP6.45□□□□□ -1.38
NPM1-210ENST00000523339 CFAP74Q9C0B2 1584 aa6.44□□□□□ -1.38
NPM1-210ENST00000523339 TRAPPC8Q9Y2L5 1435 aa6.44□□□□□ -1.38
NPM1-210ENST00000523339 PSDA5PKW4 1024 aaPredicted RBP6.44□□□□□ -1.38
NPM1-210ENST00000523339 GTPBP6O43824 516 aaPredicted RBP6.44□□□□□ -1.38
NPM1-210ENST00000523339 KCTD12Q96CX2 325 aaKnown RBP6.44□□□□□ -1.38
NPM1-210ENST00000523339 VPS9D1Q9Y2B5 631 aa6.44□□□□□ -1.38
NPM1-210ENST00000523339 STRCQ7RTU9 1775 aa6.44□□□□□ -1.38
NPM1-210ENST00000523339 NCOA1Q15788 1441 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 TBC1D12O60347 775 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 PPP4R3BQ5MIZ7 849 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 EFCAB2Q5VUJ9 269 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 KCNK17Q96T54 332 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 ANO8Q9HCE9 1232 aaPredicted RBP6.43□□□□□ -1.38
NPM1-210ENST00000523339 ARHGEF12Q9NZN5 1544 aa6.43□□□□□ -1.38
NPM1-210ENST00000523339 ZMYM4Q5VZL5 1548 aa6.42□□□□□ -1.38
NPM1-210ENST00000523339 HECW1Q76N89 1606 aa6.42□□□□□ -1.38
NPM1-210ENST00000523339 CAMSAP1Q5T5Y3 1602 aa6.41□□□□□ -1.38
NPM1-210ENST00000523339 BHMG1C9JSJ3 638 aaPredicted RBP6.41□□□□□ -1.38
NPM1-210ENST00000523339 PPP1R15BQ5SWA1 713 aa6.41□□□□□ -1.38
NPM1-210ENST00000523339 ZNF454Q8N9F8 522 aa6.41□□□□□ -1.38
NPM1-210ENST00000523339 RICTORQ6R327 1708 aa6.4□□□□□ -1.38
NPM1-210ENST00000523339 FOSBP53539 338 aa6.4□□□□□ -1.38
NPM1-210ENST00000523339 AFAP1Q8N556 730 aa6.4□□□□□ -1.38
NPM1-210ENST00000523339 PTPN5P54829 565 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 CADPS2Q86UW7 1296 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 PTPRKQ15262 1439 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 CNTLNQ9NXG0 1405 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 RAPGEF6Q8TEU7 1601 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 CTTNBP2Q8WZ74 1663 aa6.39□□□□□ -1.39
NPM1-210ENST00000523339 PDE4AP27815 886 aa6.38□□□□□ -1.39
NPM1-210ENST00000523339 LARP6Q9BRS8 491 aaKnown RBP6.38□□□□□ -1.39
NPM1-210ENST00000523339 ADAM33Q9BZ11 813 aa6.38□□□□□ -1.39
NPM1-210ENST00000523339 BCL2L12Q9HB09 334 aa6.38□□□□□ -1.39
NPM1-210ENST00000523339 EMILIN3Q9NT22 766 aa6.38□□□□□ -1.39
NPM1-210ENST00000523339 CDK11AQ9UQ88 783 aaPredicted RBP6.38□□□□□ -1.39
NPM1-210ENST00000523339 ZNF518AQ6AHZ1 1483 aa6.38□□□□□ -1.39
NPM1-210ENST00000523339 SIGLEC1Q9BZZ2 1709 aa6.37□□□□□ -1.39
NPM1-210ENST00000523339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.37□□□□□ -1.395e-17■□□□□ 10.1
NPM1-210ENST00000523339 EVI5O60447 810 aa6.37□□□□□ -1.39
NPM1-210ENST00000523339 ZBED2Q9BTP6 218 aa6.37□□□□□ -1.39
NPM1-210ENST00000523339 NUP153P49790 1475 aaKnown RBP6.36□□□□□ -1.39
NPM1-210ENST00000523339 PLCH2O75038 1416 aa6.36□□□□□ -1.39
NPM1-210ENST00000523339 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
NPM1-210ENST00000523339 CPS1P31327 1500 aa6.35□□□□□ -1.39
NPM1-210ENST00000523339 NPATQ14207 1427 aa6.35□□□□□ -1.39
NPM1-210ENST00000523339 ZMYM3Q14202 1370 aa6.35□□□□□ -1.39
NPM1-210ENST00000523339 GGT6Q6P531 493 aa6.35□□□□□ -1.39
NPM1-210ENST00000523339 SETD1BQ9UPS6 1966 aaKnown RBP6.35□□□□□ -1.39
NPM1-210ENST00000523339 ARHGAP5Q13017 1502 aa6.35□□□□□ -1.39
NPM1-210ENST00000523339 C3P01024 1663 aa6.34□□□□□ -1.39
NPM1-210ENST00000523339 MFSD10Q14728 455 aa6.34□□□□□ -1.39
NPM1-210ENST00000523339 ANKLE2Q86XL3 938 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms