RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 TMEM2Q9UHN6 1383 aa15.69■□□□□ 0.1
DENND3-220ENST00000523066 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
DENND3-220ENST00000523066 MED14O60244 1454 aa15.68■□□□□ 0.1
DENND3-220ENST00000523066 SCAF11Q99590 1463 aaKnown RBP15.68■□□□□ 0.1
DENND3-220ENST00000523066 MPHOSPH9Q99550 1183 aa15.67■□□□□ 0.1
DENND3-220ENST00000523066 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
DENND3-220ENST00000523066 TRPM2O94759 1503 aa15.66■□□□□ 0.1
DENND3-220ENST00000523066 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
DENND3-220ENST00000523066 KIF1BO60333 1816 aa15.64■□□□□ 0.09
DENND3-220ENST00000523066 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
DENND3-220ENST00000523066 EID1Q9Y6B2 187 aa15.64■□□□□ 0.09
DENND3-220ENST00000523066 STRCP1A6NGW2 1772 aa15.64■□□□□ 0.09
DENND3-220ENST00000523066 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
DENND3-220ENST00000523066 RIMS2Q9UQ26 1411 aa15.63■□□□□ 0.09
DENND3-220ENST00000523066 CERKQ8TCT0 537 aa15.63■□□□□ 0.09
DENND3-220ENST00000523066 SLC26A8Q96RN1 970 aa15.59■□□□□ 0.09
DENND3-220ENST00000523066 ZNF326Q5BKZ1 582 aaKnown RBP15.58■□□□□ 0.08
DENND3-220ENST00000523066 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
DENND3-220ENST00000523066 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
DENND3-220ENST00000523066 BCANQ96GW7 911 aa15.56■□□□□ 0.08
DENND3-220ENST00000523066 NEXMIFQ5QGS0 1516 aa15.56■□□□□ 0.08
DENND3-220ENST00000523066 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
DENND3-220ENST00000523066 NRXN3Q9Y4C0 1643 aa15.54■□□□□ 0.08
DENND3-220ENST00000523066 CCDC144AA2RUR9 1427 aa15.53■□□□□ 0.08
DENND3-220ENST00000523066 HRCP23327 699 aa15.53■□□□□ 0.08
DENND3-220ENST00000523066 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.53■□□□□ 0.08
DENND3-220ENST00000523066 PPLO60437 1756 aa15.53■□□□□ 0.08
DENND3-220ENST00000523066 ADAMTS13Q76LX8 1427 aa15.52■□□□□ 0.08
DENND3-220ENST00000523066 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.08
DENND3-220ENST00000523066 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
DENND3-220ENST00000523066 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
DENND3-220ENST00000523066 CPS1P31327 1500 aa15.52■□□□□ 0.07
DENND3-220ENST00000523066 XIRP1Q702N8 1843 aaKnown RBP15.52■□□□□ 0.07
DENND3-220ENST00000523066 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
DENND3-220ENST00000523066 CHD2O14647 1828 aaKnown RBP15.51■□□□□ 0.07
DENND3-220ENST00000523066 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
DENND3-220ENST00000523066 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
DENND3-220ENST00000523066 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
DENND3-220ENST00000523066 IFT172Q9UG01 1749 aa15.49■□□□□ 0.07
DENND3-220ENST00000523066 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
DENND3-220ENST00000523066 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
DENND3-220ENST00000523066 IQSEC2Q5JU85 1478 aa15.47■□□□□ 0.07
DENND3-220ENST00000523066 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
DENND3-220ENST00000523066 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
DENND3-220ENST00000523066 KCNA6P17658 529 aa15.46■□□□□ 0.07
DENND3-220ENST00000523066 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
DENND3-220ENST00000523066 TBX22Q9Y458 520 aa15.46■□□□□ 0.07
DENND3-220ENST00000523066 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.06
DENND3-220ENST00000523066 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
DENND3-220ENST00000523066 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
DENND3-220ENST00000523066 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
DENND3-220ENST00000523066 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
DENND3-220ENST00000523066 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
DENND3-220ENST00000523066 UBAP1LF5GYI3 381 aa15.43■□□□□ 0.06
DENND3-220ENST00000523066 METP08581 1390 aa15.43■□□□□ 0.06
DENND3-220ENST00000523066 VGFO15240 615 aaPredicted RBP15.42■□□□□ 0.06
DENND3-220ENST00000523066 TMEM94Q12767 1356 aa15.41■□□□□ 0.06
DENND3-220ENST00000523066 ZBTB22O15209 634 aa15.41■□□□□ 0.06
DENND3-220ENST00000523066 PROSER2Q86WR7 435 aaPredicted RBP15.41■□□□□ 0.06
DENND3-220ENST00000523066 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
DENND3-220ENST00000523066 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
DENND3-220ENST00000523066 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
DENND3-220ENST00000523066 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
DENND3-220ENST00000523066 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
DENND3-220ENST00000523066 PIP4K2BP78356 416 aa15.37■□□□□ 0.05
DENND3-220ENST00000523066 PIK3C2GO75747 1445 aa15.35■□□□□ 0.05
DENND3-220ENST00000523066 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
DENND3-220ENST00000523066 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
DENND3-220ENST00000523066 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
DENND3-220ENST00000523066 MYOM2P54296 1465 aa15.34■□□□□ 0.05
DENND3-220ENST00000523066 TOM1O60784 492 aa15.34■□□□□ 0.05
DENND3-220ENST00000523066 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.05
DENND3-220ENST00000523066 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
DENND3-220ENST00000523066 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
DENND3-220ENST00000523066 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
DENND3-220ENST00000523066 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
DENND3-220ENST00000523066 PCGF6Q9BYE7 350 aa15.32■□□□□ 0.04
DENND3-220ENST00000523066 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
DENND3-220ENST00000523066 NALCNQ8IZF0 1738 aa15.3■□□□□ 0.04
DENND3-220ENST00000523066 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
DENND3-220ENST00000523066 STK26Q9P289 416 aa15.3■□□□□ 0.04
DENND3-220ENST00000523066 MSH6P52701 1360 aa15.29■□□□□ 0.04
DENND3-220ENST00000523066 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
DENND3-220ENST00000523066 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
DENND3-220ENST00000523066 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
DENND3-220ENST00000523066 LAMC1P11047 1609 aa15.28■□□□□ 0.04
DENND3-220ENST00000523066 KNDC1Q76NI1 1749 aa15.27■□□□□ 0.04
DENND3-220ENST00000523066 NCOA3Q9Y6Q9 1424 aa15.26■□□□□ 0.03
DENND3-220ENST00000523066 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
DENND3-220ENST00000523066 HSPA1LP34931 641 aa15.26■□□□□ 0.03
DENND3-220ENST00000523066 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
DENND3-220ENST00000523066 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
DENND3-220ENST00000523066 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
DENND3-220ENST00000523066 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
DENND3-220ENST00000523066 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
DENND3-220ENST00000523066 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
DENND3-220ENST00000523066 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
DENND3-220ENST00000523066 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
DENND3-220ENST00000523066 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
DENND3-220ENST00000523066 SLAIN2Q9P270 581 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms