RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
MEG3-220ENST00000522771 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
MEG3-220ENST00000522771 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
MEG3-220ENST00000522771 MRE11P49959 708 aa13.22□□□□□ -0.29
MEG3-220ENST00000522771 NUCB2P80303 420 aa13.22□□□□□ -0.29
MEG3-220ENST00000522771 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
MEG3-220ENST00000522771 VPS53Q5VIR6 699 aa13.21□□□□□ -0.29
MEG3-220ENST00000522771 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
MEG3-220ENST00000522771 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.3
MEG3-220ENST00000522771 PRM3Q9NNZ6 103 aa13.21□□□□□ -0.3
MEG3-220ENST00000522771 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.3
MEG3-220ENST00000522771 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.3
MEG3-220ENST00000522771 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
MEG3-220ENST00000522771 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
MEG3-220ENST00000522771 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
MEG3-220ENST00000522771 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
MEG3-220ENST00000522771 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
MEG3-220ENST00000522771 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
MEG3-220ENST00000522771 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
MEG3-220ENST00000522771 LNPKQ9C0E8 428 aa13.19□□□□□ -0.3
MEG3-220ENST00000522771 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
MEG3-220ENST00000522771 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
MEG3-220ENST00000522771 TRAK2O60296 914 aa13.18□□□□□ -0.3
MEG3-220ENST00000522771 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
MEG3-220ENST00000522771 FOSBP53539 338 aa13.18□□□□□ -0.3
MEG3-220ENST00000522771 TRIM29Q14134 588 aa13.18□□□□□ -0.3
MEG3-220ENST00000522771 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
MEG3-220ENST00000522771 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
MEG3-220ENST00000522771 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
MEG3-220ENST00000522771 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
MEG3-220ENST00000522771 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
MEG3-220ENST00000522771 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
MEG3-220ENST00000522771 RIPK4P57078 832 aa13.16□□□□□ -0.3
MEG3-220ENST00000522771 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
MEG3-220ENST00000522771 CCDC7Q96M83 1385 aa13.16□□□□□ -0.3
MEG3-220ENST00000522771 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
MEG3-220ENST00000522771 ARGLU1Q9NWB6 273 aaPredicted RBP13.16□□□□□ -0.3
MEG3-220ENST00000522771 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
MEG3-220ENST00000522771 COG3Q96JB2 828 aa13.15□□□□□ -0.3
MEG3-220ENST00000522771 TMX4Q9H1E5 349 aaPredicted RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
MEG3-220ENST00000522771 EIF2S2P20042 333 aaKnown RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
MEG3-220ENST00000522771 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
MEG3-220ENST00000522771 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 EVC2Q86UK5 1308 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 CAVIN1Q6NZI2 390 aaKnown RBP13.14□□□□□ -0.31
MEG3-220ENST00000522771 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
MEG3-220ENST00000522771 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
MEG3-220ENST00000522771 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
MEG3-220ENST00000522771 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
MEG3-220ENST00000522771 CPLX1O14810 134 aa13.13□□□□□ -0.31
MEG3-220ENST00000522771 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
MEG3-220ENST00000522771 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
MEG3-220ENST00000522771 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
MEG3-220ENST00000522771 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
MEG3-220ENST00000522771 G3V3G9 751 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 AK7Q96M32 723 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 RUFY1Q96T51 708 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
MEG3-220ENST00000522771 C1orf141Q5JVX7 400 aa13.12□□□□□ -0.31
MEG3-220ENST00000522771 CDC45O75419 566 aa13.11□□□□□ -0.31
MEG3-220ENST00000522771 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
MEG3-220ENST00000522771 APPP05067 770 aa13.11□□□□□ -0.31
MEG3-220ENST00000522771 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
MEG3-220ENST00000522771 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
MEG3-220ENST00000522771 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.1□□□□□ -0.31
MEG3-220ENST00000522771 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
MEG3-220ENST00000522771 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
MEG3-220ENST00000522771 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
MEG3-220ENST00000522771 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
MEG3-220ENST00000522771 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
MEG3-220ENST00000522771 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
MEG3-220ENST00000522771 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
MEG3-220ENST00000522771 PDILTQ8N807 584 aa13.09□□□□□ -0.31
MEG3-220ENST00000522771 NFXL1Q6ZNB6 911 aa13.09□□□□□ -0.31
MEG3-220ENST00000522771 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
MEG3-220ENST00000522771 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
MEG3-220ENST00000522771 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
MEG3-220ENST00000522771 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.31
MEG3-220ENST00000522771 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.31
MEG3-220ENST00000522771 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
MEG3-220ENST00000522771 TEFQ10587 303 aa13.08□□□□□ -0.32
MEG3-220ENST00000522771 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
MEG3-220ENST00000522771 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
MEG3-220ENST00000522771 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
MEG3-220ENST00000522771 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.08□□□□□ -0.32
MEG3-220ENST00000522771 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
MEG3-220ENST00000522771 G3BP1Q13283 466 aaKnown RBP eCLIP13.07□□□□□ -0.32
MEG3-220ENST00000522771 TRDNQ13061 729 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms