RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 SLC52A1Q9NWF4 448 aa32.89■■■□□ 2.86
HOXA3-205ENST00000522456 HFM1A2PYH4 1435 aa32.88■■■□□ 2.85
HOXA3-205ENST00000522456 PHF23Q9BUL5 403 aaPredicted RBP32.86■■■□□ 2.85
HOXA3-205ENST00000522456 KCNA6P17658 529 aa32.84■■■□□ 2.85
HOXA3-205ENST00000522456 SLC26A8Q96RN1 970 aa32.84■■■□□ 2.85
HOXA3-205ENST00000522456 TMEM94Q12767 1356 aa32.83■■■□□ 2.85
HOXA3-205ENST00000522456 NWD1Q149M9 1564 aa32.79■■■□□ 2.84
HOXA3-205ENST00000522456 NKTRP30414 1462 aaKnown RBP32.78■■■□□ 2.84
HOXA3-205ENST00000522456 E9PCH4 1651 aa32.78■■■□□ 2.84
HOXA3-205ENST00000522456 TRIM52Q96A61 297 aa32.77■■■□□ 2.84
HOXA3-205ENST00000522456 ZFYVE9O95405 1425 aa32.77■■■□□ 2.84
HOXA3-205ENST00000522456 FAM135BQ49AJ0 1406 aa32.77■■■□□ 2.84
HOXA3-205ENST00000522456 MYO5BQ9ULV0 1848 aa32.75■■■□□ 2.83
HOXA3-205ENST00000522456 PROSER2Q86WR7 435 aaPredicted RBP32.75■■■□□ 2.83
HOXA3-205ENST00000522456 BCANQ96GW7 911 aa32.75■■■□□ 2.83
HOXA3-205ENST00000522456 TMEM131LA2VDJ0 1609 aa32.73■■■□□ 2.83
HOXA3-205ENST00000522456 PLEKHG1Q9ULL1 1385 aa32.72■■■□□ 2.83
HOXA3-205ENST00000522456 RIMS2Q9UQ26 1411 aa32.72■■■□□ 2.83
HOXA3-205ENST00000522456 RBM33Q96EV2 1170 aaKnown RBP32.71■■■□□ 2.83
HOXA3-205ENST00000522456 PPP1R15AO75807 674 aaPredicted RBP32.69■■■□□ 2.82
HOXA3-205ENST00000522456 ROBO1Q9Y6N7 1651 aa32.69■■■□□ 2.82
HOXA3-205ENST00000522456 HDGFP51858 240 aaKnown RBP32.67■■■□□ 2.82
HOXA3-205ENST00000522456 MSH6P52701 1360 aa32.64■■■□□ 2.82
HOXA3-205ENST00000522456 SETD5Q9C0A6 1442 aa32.64■■■□□ 2.82
HOXA3-205ENST00000522456 CHD2O14647 1828 aaKnown RBP32.63■■■□□ 2.81
HOXA3-205ENST00000522456 CHGAP10645 457 aaKnown RBP32.62■■■□□ 2.81
HOXA3-205ENST00000522456 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.6■■■□□ 2.81
HOXA3-205ENST00000522456 SLC4A1APQ9BWU0 796 aaKnown RBP32.6■■■□□ 2.81
HOXA3-205ENST00000522456 SPHKAPQ2M3C7 1700 aa32.6■■■□□ 2.81
HOXA3-205ENST00000522456 TBX22Q9Y458 520 aa32.57■■■□□ 2.8
HOXA3-205ENST00000522456 DIP2AQ14689 1571 aa32.56■■■□□ 2.8
HOXA3-205ENST00000522456 RGS17Q9UGC6 210 aaPredicted RBP32.55■■■□□ 2.8
HOXA3-205ENST00000522456 ACIN1Q9UKV3 1341 aaKnown RBP32.54■■■□□ 2.8
HOXA3-205ENST00000522456 ADAMTS13Q76LX8 1427 aa32.54■■■□□ 2.8
HOXA3-205ENST00000522456 SLAIN2Q9P270 581 aa32.53■■■□□ 2.8
HOXA3-205ENST00000522456 NUTM2DQ5VT03 806 aaPredicted RBP32.52■■■□□ 2.8
HOXA3-205ENST00000522456 RAB3GAP2Q9H2M9 1393 aa32.51■■■□□ 2.79
HOXA3-205ENST00000522456 NCOA3Q9Y6Q9 1424 aa32.51■■■□□ 2.79
HOXA3-205ENST00000522456 TRPM2O94759 1503 aa32.49■■■□□ 2.79
HOXA3-205ENST00000522456 PHLPP1O60346 1717 aa32.48■■■□□ 2.79
HOXA3-205ENST00000522456 PIK3R4Q99570 1358 aa32.48■■■□□ 2.79
HOXA3-205ENST00000522456 MPHOSPH9Q99550 1183 aa32.48■■■□□ 2.79
HOXA3-205ENST00000522456 C14orf37Q86TY3 774 aa32.44■■■□□ 2.78
HOXA3-205ENST00000522456 FOXD1Q16676 465 aa32.43■■■□□ 2.78
HOXA3-205ENST00000522456 CLTCL1P53675 1640 aa32.41■■■□□ 2.78
HOXA3-205ENST00000522456 JCADQ9P266 1359 aa32.4■■■□□ 2.78
HOXA3-205ENST00000522456 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.4■■■□□ 2.78
HOXA3-205ENST00000522456 COL16A1Q07092 1604 aaPredicted RBP32.39■■■□□ 2.78
HOXA3-205ENST00000522456 HRCP23327 699 aa32.37■■■□□ 2.77
HOXA3-205ENST00000522456 CADPS2Q86UW7 1296 aa32.37■■■□□ 2.77
HOXA3-205ENST00000522456 PTPRUQ92729 1446 aa32.36■■■□□ 2.77
HOXA3-205ENST00000522456 POTEAQ6S8J7 498 aa32.36■■■□□ 2.77
HOXA3-205ENST00000522456 C19orf44Q9H6X5 657 aa32.36■■■□□ 2.77
HOXA3-205ENST00000522456 NRXN3Q9Y4C0 1643 aa32.36■■■□□ 2.77
HOXA3-205ENST00000522456 AMOTL2Q9Y2J4 779 aa32.35■■■□□ 2.77
HOXA3-205ENST00000522456 SETBP1Q9Y6X0 1596 aa32.35■■■□□ 2.77
HOXA3-205ENST00000522456 ATF3P18847 181 aa32.34■■■□□ 2.77
HOXA3-205ENST00000522456 KIF1BO60333 1816 aa32.34■■■□□ 2.77
HOXA3-205ENST00000522456 AHDC1Q5TGY3 1603 aaPredicted RBP32.31■■■□□ 2.76
HOXA3-205ENST00000522456 ZNF326Q5BKZ1 582 aaKnown RBP32.31■■■□□ 2.76
HOXA3-205ENST00000522456 XRN1Q8IZH2 1706 aaKnown RBP32.31■■■□□ 2.76
HOXA3-205ENST00000522456 DCCP43146 1447 aa32.26■■■□□ 2.76
HOXA3-205ENST00000522456 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
HOXA3-205ENST00000522456 NEXMIFQ5QGS0 1516 aa32.24■■■□□ 2.75
HOXA3-205ENST00000522456 SPATA31A6Q5VVP1 1343 aa32.24■■■□□ 2.75
HOXA3-205ENST00000522456 LRP6O75581 1613 aa32.23■■■□□ 2.75
HOXA3-205ENST00000522456 CCDC144AA2RUR9 1427 aa32.22■■■□□ 2.75
HOXA3-205ENST00000522456 SHPRHQ149N8 1683 aa32.21■■■□□ 2.75
HOXA3-205ENST00000522456 METP08581 1390 aa32.21■■■□□ 2.75
HOXA3-205ENST00000522456 BRINP3Q76B58 766 aa32.2■■■□□ 2.75
HOXA3-205ENST00000522456 ASXL1Q8IXJ9 1541 aa32.17■■■□□ 2.74
HOXA3-205ENST00000522456 RPGRIP1LQ68CZ1 1315 aa32.16■■■□□ 2.74
HOXA3-205ENST00000522456 MST1RQ04912 1400 aa32.16■■■□□ 2.74
HOXA3-205ENST00000522456 MEX3CQ5U5Q3 659 aaKnown RBP32.15■■■□□ 2.74
HOXA3-205ENST00000522456 SETD1AO15047 1707 aaKnown RBP32.14■■■□□ 2.74
HOXA3-205ENST00000522456 ADGRL3Q9HAR2 1447 aa32.12■■■□□ 2.73
HOXA3-205ENST00000522456 VGFO15240 615 aaPredicted RBP32.11■■■□□ 2.73
HOXA3-205ENST00000522456 RGL3Q3MIN7 710 aa32.1■■■□□ 2.73
HOXA3-205ENST00000522456 NALCNQ8IZF0 1738 aa32.09■■■□□ 2.73
HOXA3-205ENST00000522456 NHSL1Q5SYE7 1610 aa32.09■■■□□ 2.73
HOXA3-205ENST00000522456 PPLO60437 1756 aa32.08■■■□□ 2.73
HOXA3-205ENST00000522456 ZNF772Q68DY9 489 aaPredicted RBP32.07■■■□□ 2.72
HOXA3-205ENST00000522456 ANKRD30BQ9BXX2 1392 aa32.07■■■□□ 2.72
HOXA3-205ENST00000522456 SPATA31E1Q6ZUB1 1445 aa32.05■■■□□ 2.72
HOXA3-205ENST00000522456 PTCH1Q13635 1447 aa32.03■■■□□ 2.72
HOXA3-205ENST00000522456 NUTM2BA6NNL0 878 aaPredicted RBP32.02■■■□□ 2.72
HOXA3-205ENST00000522456 NUTM2EB1AL46 878 aaPredicted RBP32.02■■■□□ 2.72
HOXA3-205ENST00000522456 NUTM2AQ8IVF1 878 aaPredicted RBP32.02■■■□□ 2.72
HOXA3-205ENST00000522456 LRRC59Q96AG4 307 aaKnown RBP31.98■■■□□ 2.71
HOXA3-205ENST00000522456 IFT172Q9UG01 1749 aa31.97■■■□□ 2.71
HOXA3-205ENST00000522456 PRAG1Q86YV5 1406 aa31.96■■■□□ 2.71
HOXA3-205ENST00000522456 C1orf167Q5SNV9 1468 aa31.96■■■□□ 2.71
HOXA3-205ENST00000522456 ROBO2Q9HCK4 1378 aa31.95■■■□□ 2.71
HOXA3-205ENST00000522456 DDX17Q92841 729 aaKnown RBP31.95■■■□□ 2.71
HOXA3-205ENST00000522456 PNPLA6Q8IY17 1366 aa31.93■■■□□ 2.7
HOXA3-205ENST00000522456 AFF2P51816 1311 aa31.91■■■□□ 2.7
HOXA3-205ENST00000522456 RXRBP28702 533 aa31.9■■■□□ 2.7
HOXA3-205ENST00000522456 ADGRF5Q8IZF2 1346 aa31.9■■■□□ 2.7
HOXA3-205ENST00000522456 LAMC1P11047 1609 aa31.89■■■□□ 2.7
HOXA3-205ENST00000522456 CDK12Q9NYV4 1490 aaPredicted RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms