RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 KCNA6P17658 529 aa28.02■■■□□ 2.08
TOP1MT-216ENST00000522121 ZFYVE9O95405 1425 aa28.01■■■□□ 2.07
TOP1MT-216ENST00000522121 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.07
TOP1MT-216ENST00000522121 ABCF1Q8NE71 845 aaKnown RBP eCLIP28■■■□□ 2.07
TOP1MT-216ENST00000522121 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
TOP1MT-216ENST00000522121 ALKQ9UM73 1620 aa28■■■□□ 2.07
TOP1MT-216ENST00000522121 PLEKHG1Q9ULL1 1385 aa27.99■■■□□ 2.07
TOP1MT-216ENST00000522121 PROSER2Q86WR7 435 aaPredicted RBP27.96■■■□□ 2.07
TOP1MT-216ENST00000522121 SENP3Q9H4L4 574 aaPredicted RBP27.95■■■□□ 2.06
TOP1MT-216ENST00000522121 TMEM94Q12767 1356 aa27.94■■■□□ 2.06
TOP1MT-216ENST00000522121 ILDR2Q71H61 639 aa27.93■■■□□ 2.06
TOP1MT-216ENST00000522121 MYO5BQ9ULV0 1848 aa27.92■■■□□ 2.06
TOP1MT-216ENST00000522121 NAIPQ13075 1403 aa27.9■■■□□ 2.06
TOP1MT-216ENST00000522121 NKTRP30414 1462 aaKnown RBP27.89■■■□□ 2.06
TOP1MT-216ENST00000522121 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
TOP1MT-216ENST00000522121 TBX22Q9Y458 520 aa27.89■■■□□ 2.06
TOP1MT-216ENST00000522121 XIRP1Q702N8 1843 aaKnown RBP27.88■■■□□ 2.05
TOP1MT-216ENST00000522121 NWD1Q149M9 1564 aa27.87■■■□□ 2.05
TOP1MT-216ENST00000522121 RBM33Q96EV2 1170 aaKnown RBP27.85■■■□□ 2.05
TOP1MT-216ENST00000522121 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
TOP1MT-216ENST00000522121 HFM1A2PYH4 1435 aa27.82■■■□□ 2.04
TOP1MT-216ENST00000522121 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
TOP1MT-216ENST00000522121 ZNF326Q5BKZ1 582 aaKnown RBP27.81■■■□□ 2.04
TOP1MT-216ENST00000522121 MSH6P52701 1360 aa27.81■■■□□ 2.04
TOP1MT-216ENST00000522121 FAM135BQ49AJ0 1406 aa27.81■■■□□ 2.04
TOP1MT-216ENST00000522121 ADAMTS13Q76LX8 1427 aa27.8■■■□□ 2.04
TOP1MT-216ENST00000522121 MED1Q15648 1581 aaPredicted RBP27.8■■■□□ 2.04
TOP1MT-216ENST00000522121 DIP2AQ14689 1571 aa27.79■■■□□ 2.04
TOP1MT-216ENST00000522121 PIK3R4Q99570 1358 aa27.78■■■□□ 2.04
TOP1MT-216ENST00000522121 SOCS7O14512 581 aa27.78■■■□□ 2.04
TOP1MT-216ENST00000522121 CHD2O14647 1828 aaKnown RBP27.77■■■□□ 2.04
TOP1MT-216ENST00000522121 NCOA3Q9Y6Q9 1424 aa27.74■■■□□ 2.03
TOP1MT-216ENST00000522121 TRPM2O94759 1503 aa27.73■■■□□ 2.03
TOP1MT-216ENST00000522121 C14orf37Q86TY3 774 aa27.73■■■□□ 2.03
TOP1MT-216ENST00000522121 SLC4A1APQ9BWU0 796 aaKnown RBP27.73■■■□□ 2.03
TOP1MT-216ENST00000522121 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
TOP1MT-216ENST00000522121 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
TOP1MT-216ENST00000522121 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
TOP1MT-216ENST00000522121 CLTCL1P53675 1640 aa27.69■■■□□ 2.02
TOP1MT-216ENST00000522121 ROBO1Q9Y6N7 1651 aa27.67■■■□□ 2.02
TOP1MT-216ENST00000522121 SETBP1Q9Y6X0 1596 aa27.66■■■□□ 2.02
TOP1MT-216ENST00000522121 C19orf44Q9H6X5 657 aa27.65■■■□□ 2.02
TOP1MT-216ENST00000522121 PTPRUQ92729 1446 aa27.64■■■□□ 2.02
TOP1MT-216ENST00000522121 ATF3P18847 181 aa27.63■■■□□ 2.01
TOP1MT-216ENST00000522121 CADPS2Q86UW7 1296 aa27.63■■■□□ 2.01
TOP1MT-216ENST00000522121 NEXMIFQ5QGS0 1516 aa27.62■■■□□ 2.01
TOP1MT-216ENST00000522121 NRXN3Q9Y4C0 1643 aa27.61■■■□□ 2.01
TOP1MT-216ENST00000522121 KIF1BO60333 1816 aa27.61■■■□□ 2.01
TOP1MT-216ENST00000522121 VGFO15240 615 aaPredicted RBP27.6■■■□□ 2.01
TOP1MT-216ENST00000522121 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
TOP1MT-216ENST00000522121 METP08581 1390 aa27.58■■■□□ 2.01
TOP1MT-216ENST00000522121 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.54■■■□□ 2
TOP1MT-216ENST00000522121 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
TOP1MT-216ENST00000522121 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
TOP1MT-216ENST00000522121 FOXD1Q16676 465 aa27.53■■■□□ 2
TOP1MT-216ENST00000522121 MPHOSPH9Q99550 1183 aa27.52■■■□□ 2
TOP1MT-216ENST00000522121 DCCP43146 1447 aa27.51■■□□□ 1.99
TOP1MT-216ENST00000522121 PHLPP1O60346 1717 aa27.51■■□□□ 1.99
TOP1MT-216ENST00000522121 CCDC144AA2RUR9 1427 aa27.5■■□□□ 1.99
TOP1MT-216ENST00000522121 JCADQ9P266 1359 aa27.49■■□□□ 1.99
TOP1MT-216ENST00000522121 BRINP3Q76B58 766 aa27.44■■□□□ 1.98
TOP1MT-216ENST00000522121 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
TOP1MT-216ENST00000522121 RGS17Q9UGC6 210 aaPredicted RBP27.43■■□□□ 1.98
TOP1MT-216ENST00000522121 ADGRL3Q9HAR2 1447 aa27.42■■□□□ 1.98
TOP1MT-216ENST00000522121 COL16A1Q07092 1604 aaPredicted RBP27.41■■□□□ 1.98
TOP1MT-216ENST00000522121 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
TOP1MT-216ENST00000522121 AHDC1Q5TGY3 1603 aaPredicted RBP27.41■■□□□ 1.98
TOP1MT-216ENST00000522121 PTCH1Q13635 1447 aa27.4■■□□□ 1.98
TOP1MT-216ENST00000522121 PPLO60437 1756 aa27.4■■□□□ 1.98
TOP1MT-216ENST00000522121 MST1RQ04912 1400 aa27.39■■□□□ 1.97
TOP1MT-216ENST00000522121 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
TOP1MT-216ENST00000522121 ANKRD30BQ9BXX2 1392 aa27.36■■□□□ 1.97
TOP1MT-216ENST00000522121 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
TOP1MT-216ENST00000522121 ROBO2Q9HCK4 1378 aa27.35■■□□□ 1.97
TOP1MT-216ENST00000522121 SETD1AO15047 1707 aaKnown RBP27.35■■□□□ 1.97
TOP1MT-216ENST00000522121 ASXL1Q8IXJ9 1541 aa27.35■■□□□ 1.97
TOP1MT-216ENST00000522121 ADGRF5Q8IZF2 1346 aa27.35■■□□□ 1.97
TOP1MT-216ENST00000522121 PRAG1Q86YV5 1406 aa27.33■■□□□ 1.97
TOP1MT-216ENST00000522121 NALCNQ8IZF0 1738 aa27.32■■□□□ 1.96
TOP1MT-216ENST00000522121 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
TOP1MT-216ENST00000522121 MEX3CQ5U5Q3 659 aaKnown RBP27.31■■□□□ 1.96
TOP1MT-216ENST00000522121 POTEAQ6S8J7 498 aa27.3■■□□□ 1.96
TOP1MT-216ENST00000522121 LRRC59Q96AG4 307 aaKnown RBP27.28■■□□□ 1.96
TOP1MT-216ENST00000522121 C1orf167Q5SNV9 1468 aa27.27■■□□□ 1.96
TOP1MT-216ENST00000522121 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
TOP1MT-216ENST00000522121 STK26Q9P289 416 aa27.25■■□□□ 1.95
TOP1MT-216ENST00000522121 LRP6O75581 1613 aa27.24■■□□□ 1.95
TOP1MT-216ENST00000522121 NHSL1Q5SYE7 1610 aa27.23■■□□□ 1.95
TOP1MT-216ENST00000522121 IFT172Q9UG01 1749 aa27.23■■□□□ 1.95
TOP1MT-216ENST00000522121 PIK3C2GO75747 1445 aa27.23■■□□□ 1.95
TOP1MT-216ENST00000522121 NUTM2BA6NNL0 878 aaPredicted RBP27.22■■□□□ 1.95
TOP1MT-216ENST00000522121 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
TOP1MT-216ENST00000522121 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
TOP1MT-216ENST00000522121 DDX17Q92841 729 aaKnown RBP27.22■■□□□ 1.95
TOP1MT-216ENST00000522121 LRPPRCP42704 1394 aaKnown RBP27.22■■□□□ 1.95
TOP1MT-216ENST00000522121 ZNF772Q68DY9 489 aaPredicted RBP27.2■■□□□ 1.94
TOP1MT-216ENST00000522121 TMEM132EQ6IEE7 984 aa27.2■■□□□ 1.94
TOP1MT-216ENST00000522121 ORAI2Q96SN7 254 aa27.2■■□□□ 1.94
TOP1MT-216ENST00000522121 TECPR2O15040 1411 aa27.19■■□□□ 1.94
TOP1MT-216ENST00000522121 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms