RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 IQGAP3Q86VI3 1631 aa30.16■■■□□ 2.42
CERNA3-201ENST00000521403 PPP1R15AO75807 674 aaPredicted RBP30.16■■■□□ 2.42
CERNA3-201ENST00000521403 KCNA6P17658 529 aa30.16■■■□□ 2.42
CERNA3-201ENST00000521403 XIRP1Q702N8 1843 aaKnown RBP30.15■■■□□ 2.42
CERNA3-201ENST00000521403 SOCS7O14512 581 aa30.14■■■□□ 2.42
CERNA3-201ENST00000521403 ZFYVE9O95405 1425 aa30.13■■■□□ 2.41
CERNA3-201ENST00000521403 RIMS2Q9UQ26 1411 aa30.13■■■□□ 2.41
CERNA3-201ENST00000521403 TMEM131LA2VDJ0 1609 aa30.13■■■□□ 2.41
CERNA3-201ENST00000521403 TMEM94Q12767 1356 aa30.13■■■□□ 2.41
CERNA3-201ENST00000521403 MED1Q15648 1581 aaPredicted RBP30.12■■■□□ 2.41
CERNA3-201ENST00000521403 HDGFP51858 240 aaKnown RBP30.12■■■□□ 2.41
CERNA3-201ENST00000521403 PROSER2Q86WR7 435 aaPredicted RBP30.1■■■□□ 2.41
CERNA3-201ENST00000521403 RBM33Q96EV2 1170 aaKnown RBP30.09■■■□□ 2.41
CERNA3-201ENST00000521403 PLEKHG1Q9ULL1 1385 aa30.09■■■□□ 2.41
CERNA3-201ENST00000521403 NKTRP30414 1462 aaKnown RBP30.06■■■□□ 2.4
CERNA3-201ENST00000521403 NUTM2DQ5VT03 806 aaPredicted RBP30.05■■■□□ 2.4
CERNA3-201ENST00000521403 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.05■■■□□ 2.4
CERNA3-201ENST00000521403 NWD1Q149M9 1564 aa30.05■■■□□ 2.4
CERNA3-201ENST00000521403 RRBP1Q9P2E9 1410 aaKnown RBP30.02■■■□□ 2.4
CERNA3-201ENST00000521403 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
CERNA3-201ENST00000521403 TBX22Q9Y458 520 aa29.97■■■□□ 2.39
CERNA3-201ENST00000521403 FAM135BQ49AJ0 1406 aa29.96■■■□□ 2.39
CERNA3-201ENST00000521403 MSH6P52701 1360 aa29.96■■■□□ 2.39
CERNA3-201ENST00000521403 CHD2O14647 1828 aaKnown RBP29.96■■■□□ 2.39
CERNA3-201ENST00000521403 SPHKAPQ2M3C7 1700 aa29.93■■■□□ 2.38
CERNA3-201ENST00000521403 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
CERNA3-201ENST00000521403 NAIPQ13075 1403 aa29.9■■■□□ 2.38
CERNA3-201ENST00000521403 ROBO1Q9Y6N7 1651 aa29.9■■■□□ 2.38
CERNA3-201ENST00000521403 DIP2AQ14689 1571 aa29.9■■■□□ 2.38
CERNA3-201ENST00000521403 ZNF326Q5BKZ1 582 aaKnown RBP29.88■■■□□ 2.37
CERNA3-201ENST00000521403 C14orf37Q86TY3 774 aa29.88■■■□□ 2.37
CERNA3-201ENST00000521403 SLAIN2Q9P270 581 aa29.85■■■□□ 2.37
CERNA3-201ENST00000521403 PIK3R4Q99570 1358 aa29.85■■■□□ 2.37
CERNA3-201ENST00000521403 TRPM2O94759 1503 aa29.83■■■□□ 2.37
CERNA3-201ENST00000521403 TRIM52Q96A61 297 aa29.83■■■□□ 2.37
CERNA3-201ENST00000521403 NCOA3Q9Y6Q9 1424 aa29.8■■■□□ 2.36
CERNA3-201ENST00000521403 AMOTL2Q9Y2J4 779 aa29.8■■■□□ 2.36
CERNA3-201ENST00000521403 CLTCL1P53675 1640 aa29.8■■■□□ 2.36
CERNA3-201ENST00000521403 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
CERNA3-201ENST00000521403 PTPRUQ92729 1446 aa29.77■■■□□ 2.36
CERNA3-201ENST00000521403 NRXN3Q9Y4C0 1643 aa29.76■■■□□ 2.35
CERNA3-201ENST00000521403 SETBP1Q9Y6X0 1596 aa29.76■■■□□ 2.35
CERNA3-201ENST00000521403 ATF3P18847 181 aa29.74■■■□□ 2.35
CERNA3-201ENST00000521403 CADPS2Q86UW7 1296 aa29.74■■■□□ 2.35
CERNA3-201ENST00000521403 C19orf44Q9H6X5 657 aa29.74■■■□□ 2.35
CERNA3-201ENST00000521403 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.73■■■□□ 2.35
CERNA3-201ENST00000521403 PHLPP1O60346 1717 aa29.72■■■□□ 2.35
CERNA3-201ENST00000521403 SLC4A1APQ9BWU0 796 aaKnown RBP29.72■■■□□ 2.35
CERNA3-201ENST00000521403 NEXMIFQ5QGS0 1516 aa29.71■■■□□ 2.35
CERNA3-201ENST00000521403 KIF1BO60333 1816 aa29.71■■■□□ 2.35
CERNA3-201ENST00000521403 METP08581 1390 aa29.69■■■□□ 2.34
CERNA3-201ENST00000521403 RGS17Q9UGC6 210 aaPredicted RBP29.69■■■□□ 2.34
CERNA3-201ENST00000521403 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
CERNA3-201ENST00000521403 JCADQ9P266 1359 aa29.64■■■□□ 2.34
CERNA3-201ENST00000521403 COL16A1Q07092 1604 aaPredicted RBP29.62■■■□□ 2.33
CERNA3-201ENST00000521403 DCCP43146 1447 aa29.6■■■□□ 2.33
CERNA3-201ENST00000521403 VGFO15240 615 aaPredicted RBP29.59■■■□□ 2.33
CERNA3-201ENST00000521403 FOXD1Q16676 465 aa29.59■■■□□ 2.33
CERNA3-201ENST00000521403 BRINP3Q76B58 766 aa29.57■■■□□ 2.32
CERNA3-201ENST00000521403 AHDC1Q5TGY3 1603 aaPredicted RBP29.56■■■□□ 2.32
CERNA3-201ENST00000521403 RPGRIP1LQ68CZ1 1315 aa29.55■■■□□ 2.32
CERNA3-201ENST00000521403 POTEAQ6S8J7 498 aa29.54■■■□□ 2.32
CERNA3-201ENST00000521403 ADGRL3Q9HAR2 1447 aa29.53■■■□□ 2.32
CERNA3-201ENST00000521403 MST1RQ04912 1400 aa29.52■■■□□ 2.32
CERNA3-201ENST00000521403 ASXL1Q8IXJ9 1541 aa29.5■■■□□ 2.31
CERNA3-201ENST00000521403 SPATA31A6Q5VVP1 1343 aa29.49■■■□□ 2.31
CERNA3-201ENST00000521403 CCDC144AA2RUR9 1427 aa29.49■■■□□ 2.31
CERNA3-201ENST00000521403 PPLO60437 1756 aa29.49■■■□□ 2.31
CERNA3-201ENST00000521403 SETD1AO15047 1707 aaKnown RBP29.48■■■□□ 2.31
CERNA3-201ENST00000521403 NALCNQ8IZF0 1738 aa29.48■■■□□ 2.31
CERNA3-201ENST00000521403 MPHOSPH9Q99550 1183 aa29.48■■■□□ 2.31
CERNA3-201ENST00000521403 MEX3CQ5U5Q3 659 aaKnown RBP29.47■■■□□ 2.31
CERNA3-201ENST00000521403 PTCH1Q13635 1447 aa29.46■■■□□ 2.31
CERNA3-201ENST00000521403 LRP6O75581 1613 aa29.46■■■□□ 2.31
CERNA3-201ENST00000521403 SHPRHQ149N8 1683 aa29.44■■■□□ 2.3
CERNA3-201ENST00000521403 ROBO2Q9HCK4 1378 aa29.44■■■□□ 2.3
CERNA3-201ENST00000521403 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
CERNA3-201ENST00000521403 NHSL1Q5SYE7 1610 aa29.4■■■□□ 2.3
CERNA3-201ENST00000521403 NUTM2BA6NNL0 878 aaPredicted RBP29.39■■■□□ 2.3
CERNA3-201ENST00000521403 NUTM2EB1AL46 878 aaPredicted RBP29.39■■■□□ 2.3
CERNA3-201ENST00000521403 NUTM2AQ8IVF1 878 aaPredicted RBP29.39■■■□□ 2.3
CERNA3-201ENST00000521403 DDX17Q92841 729 aaKnown RBP29.39■■■□□ 2.3
CERNA3-201ENST00000521403 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
CERNA3-201ENST00000521403 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
CERNA3-201ENST00000521403 SETD5Q9C0A6 1442 aa29.37■■■□□ 2.29
CERNA3-201ENST00000521403 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
CERNA3-201ENST00000521403 C1orf167Q5SNV9 1468 aa29.36■■■□□ 2.29
CERNA3-201ENST00000521403 LRRC59Q96AG4 307 aaKnown RBP29.35■■■□□ 2.29
CERNA3-201ENST00000521403 ANKRD30BQ9BXX2 1392 aa29.34■■■□□ 2.29
CERNA3-201ENST00000521403 ZNF772Q68DY9 489 aaPredicted RBP29.33■■■□□ 2.29
CERNA3-201ENST00000521403 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
CERNA3-201ENST00000521403 STK26Q9P289 416 aa29.3■■■□□ 2.28
CERNA3-201ENST00000521403 IFT172Q9UG01 1749 aa29.3■■■□□ 2.28
CERNA3-201ENST00000521403 ORAI2Q96SN7 254 aa29.29■■■□□ 2.28
CERNA3-201ENST00000521403 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.28
CERNA3-201ENST00000521403 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
CERNA3-201ENST00000521403 TMEM132EQ6IEE7 984 aa29.25■■■□□ 2.27
CERNA3-201ENST00000521403 PIK3C2GO75747 1445 aa29.25■■■□□ 2.27
CERNA3-201ENST00000521403 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
CERNA3-201ENST00000521403 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms