RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.2■■■□□ 2.11
LAMA4-215ENST00000521398 NEXMIFQ5QGS0 1516 aa28.2■■■□□ 2.1
LAMA4-215ENST00000521398 STAC3Q96MF2 364 aa28.19■■■□□ 2.1
LAMA4-215ENST00000521398 TIMELESSQ9UNS1 1208 aa28.18■■■□□ 2.1
LAMA4-215ENST00000521398 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
LAMA4-215ENST00000521398 TONSLQ96HA7 1378 aa28.18■■■□□ 2.1
LAMA4-215ENST00000521398 EID1Q9Y6B2 187 aa28.18■■■□□ 2.1
LAMA4-215ENST00000521398 PPLO60437 1756 aa28.17■■■□□ 2.1
LAMA4-215ENST00000521398 ANKLE2Q86XL3 938 aa28.16■■■□□ 2.1
LAMA4-215ENST00000521398 SCAF11Q99590 1463 aaKnown RBP28.15■■■□□ 2.1
LAMA4-215ENST00000521398 MYOM2P54296 1465 aa28.14■■■□□ 2.1
LAMA4-215ENST00000521398 VGFO15240 615 aaPredicted RBP28.14■■■□□ 2.09
LAMA4-215ENST00000521398 HSPA2P54652 639 aa28.14■■■□□ 2.09
LAMA4-215ENST00000521398 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
LAMA4-215ENST00000521398 L3MBTL2Q969R5 705 aa28.12■■■□□ 2.09
LAMA4-215ENST00000521398 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
LAMA4-215ENST00000521398 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
LAMA4-215ENST00000521398 PPP1R15AO75807 674 aaPredicted RBP28.1■■■□□ 2.09
LAMA4-215ENST00000521398 LTKP29376 864 aa28.1■■■□□ 2.09
LAMA4-215ENST00000521398 MED14O60244 1454 aa28.08■■■□□ 2.09
LAMA4-215ENST00000521398 PLEKHG1Q9ULL1 1385 aa28.07■■■□□ 2.08
LAMA4-215ENST00000521398 NRXN1Q9ULB1 1477 aa28.06■■■□□ 2.08
LAMA4-215ENST00000521398 NUTM2DQ5VT03 806 aaPredicted RBP28.03■■■□□ 2.08
LAMA4-215ENST00000521398 STRCQ7RTU9 1775 aa28.03■■■□□ 2.08
LAMA4-215ENST00000521398 KDM2AQ9Y2K7 1162 aa28.02■■■□□ 2.08
LAMA4-215ENST00000521398 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
LAMA4-215ENST00000521398 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
LAMA4-215ENST00000521398 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
LAMA4-215ENST00000521398 NPHP4O75161 1426 aaPredicted RBP28.02■■■□□ 2.08
LAMA4-215ENST00000521398 PIK3C2GO75747 1445 aa28.01■■■□□ 2.07
LAMA4-215ENST00000521398 IQGAP1P46940 1657 aa28■■■□□ 2.07
LAMA4-215ENST00000521398 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
LAMA4-215ENST00000521398 DMRT2Q9Y5R5 561 aa27.97■■■□□ 2.07
LAMA4-215ENST00000521398 DIP2AQ14689 1571 aa27.97■■■□□ 2.07
LAMA4-215ENST00000521398 LAMC1P11047 1609 aa27.95■■■□□ 2.06
LAMA4-215ENST00000521398 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
LAMA4-215ENST00000521398 BCANQ96GW7 911 aa27.94■■■□□ 2.06
LAMA4-215ENST00000521398 ADAMTS13Q76LX8 1427 aa27.93■■■□□ 2.06
LAMA4-215ENST00000521398 ALKQ9UM73 1620 aa27.91■■■□□ 2.06
LAMA4-215ENST00000521398 KIAA1210Q9ULL0 1709 aa27.91■■■□□ 2.06
LAMA4-215ENST00000521398 TBX22Q9Y458 520 aa27.91■■■□□ 2.06
LAMA4-215ENST00000521398 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
LAMA4-215ENST00000521398 ZEB1P37275 1124 aaPredicted RBP27.88■■■□□ 2.05
LAMA4-215ENST00000521398 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
LAMA4-215ENST00000521398 PIK3R4Q99570 1358 aa27.87■■■□□ 2.05
LAMA4-215ENST00000521398 SLC26A8Q96RN1 970 aa27.86■■■□□ 2.05
LAMA4-215ENST00000521398 TRPM1Q7Z4N2 1603 aa27.85■■■□□ 2.05
LAMA4-215ENST00000521398 NBPF8Q3BBV2 869 aa27.85■■■□□ 2.05
LAMA4-215ENST00000521398 CFAP70Q5T0N1 1121 aa27.85■■■□□ 2.05
LAMA4-215ENST00000521398 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
LAMA4-215ENST00000521398 RALGAPBQ86X10 1494 aa27.82■■■□□ 2.04
LAMA4-215ENST00000521398 ADGRB1O14514 1584 aa27.79■■■□□ 2.04
LAMA4-215ENST00000521398 METP08581 1390 aa27.79■■■□□ 2.04
LAMA4-215ENST00000521398 ASXL1Q8IXJ9 1541 aa27.78■■■□□ 2.04
LAMA4-215ENST00000521398 ROCK2O75116 1388 aaKnown RBP27.77■■■□□ 2.04
LAMA4-215ENST00000521398 GPRASP1Q5JY77 1395 aa27.77■■■□□ 2.04
LAMA4-215ENST00000521398 CHD2O14647 1828 aaKnown RBP27.75■■■□□ 2.03
LAMA4-215ENST00000521398 NWD1Q149M9 1564 aa27.74■■■□□ 2.03
LAMA4-215ENST00000521398 NBPF1Q3BBV0 1214 aa27.73■■■□□ 2.03
LAMA4-215ENST00000521398 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
LAMA4-215ENST00000521398 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
LAMA4-215ENST00000521398 TMEM132EQ6IEE7 984 aa27.72■■■□□ 2.03
LAMA4-215ENST00000521398 KCNA6P17658 529 aa27.71■■■□□ 2.03
LAMA4-215ENST00000521398 XRN1Q8IZH2 1706 aaKnown RBP27.71■■■□□ 2.03
LAMA4-215ENST00000521398 PTPRUQ92729 1446 aa27.71■■■□□ 2.03
LAMA4-215ENST00000521398 ABCC11Q96J66 1382 aa27.71■■■□□ 2.03
LAMA4-215ENST00000521398 TECPR2O15040 1411 aa27.7■■■□□ 2.02
LAMA4-215ENST00000521398 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.02
LAMA4-215ENST00000521398 AMOTL2Q9Y2J4 779 aa27.68■■■□□ 2.02
LAMA4-215ENST00000521398 NKTRP30414 1462 aaKnown RBP27.68■■■□□ 2.02
LAMA4-215ENST00000521398 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
LAMA4-215ENST00000521398 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
LAMA4-215ENST00000521398 PTCH1Q13635 1447 aa27.66■■■□□ 2.02
LAMA4-215ENST00000521398 CPS1P31327 1500 aa27.66■■■□□ 2.02
LAMA4-215ENST00000521398 SIRT1Q96EB6 747 aa27.65■■■□□ 2.02
LAMA4-215ENST00000521398 ZNF335Q9H4Z2 1342 aaPredicted RBP27.64■■■□□ 2.02
LAMA4-215ENST00000521398 STK26Q9P289 416 aa27.63■■■□□ 2.01
LAMA4-215ENST00000521398 STRCP1A6NGW2 1772 aa27.62■■■□□ 2.01
LAMA4-215ENST00000521398 FAM135BQ49AJ0 1406 aa27.62■■■□□ 2.01
LAMA4-215ENST00000521398 EIF3AQ14152 1382 aaKnown RBP27.62■■■□□ 2.01
LAMA4-215ENST00000521398 TRAK1Q9UPV9 953 aa27.6■■■□□ 2.01
LAMA4-215ENST00000521398 ARHGEF28Q8N1W1 1705 aaKnown RBP27.59■■■□□ 2.01
LAMA4-215ENST00000521398 ROBO2Q9HCK4 1378 aa27.58■■■□□ 2.01
LAMA4-215ENST00000521398 LTBP4Q8N2S1 1624 aa27.56■■■□□ 2
LAMA4-215ENST00000521398 NCOA3Q9Y6Q9 1424 aa27.55■■■□□ 2
LAMA4-215ENST00000521398 USP47Q96K76 1375 aa27.54■■■□□ 2
LAMA4-215ENST00000521398 PROSER2Q86WR7 435 aaPredicted RBP27.54■■■□□ 2
LAMA4-215ENST00000521398 LRRC7Q96NW7 1537 aa27.52■■■□□ 2
LAMA4-215ENST00000521398 PRAM1Q96QH2 718 aa27.52■■■□□ 2
LAMA4-215ENST00000521398 POGKQ9P215 609 aa27.52■■■□□ 2
LAMA4-215ENST00000521398 CENPJQ9HC77 1338 aaPredicted RBP27.5■■□□□ 1.99
LAMA4-215ENST00000521398 EIF4G2P78344 907 aaKnown RBP eCLIP27.49■■□□□ 1.99
LAMA4-215ENST00000521398 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
LAMA4-215ENST00000521398 WAPLQ7Z5K2 1190 aa27.48■■□□□ 1.99
LAMA4-215ENST00000521398 PLEKHH1Q9ULM0 1364 aa27.47■■□□□ 1.99
LAMA4-215ENST00000521398 SBNO2Q9Y2G9 1366 aa27.46■■□□□ 1.99
LAMA4-215ENST00000521398 ADGRL3Q9HAR2 1447 aa27.45■■□□□ 1.98
LAMA4-215ENST00000521398 QRICH2Q9H0J4 1663 aa27.45■■□□□ 1.98
LAMA4-215ENST00000521398 SLC24A1O60721 1099 aa27.44■■□□□ 1.98
LAMA4-215ENST00000521398 XIRP1Q702N8 1843 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms