RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 HDGFP51858 240 aaKnown RBP21.05■□□□□ 0.96
SPARC-203ENST00000521327 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
SPARC-203ENST00000521327 KDM5AP29375 1690 aaKnown RBP21.03■□□□□ 0.96
SPARC-203ENST00000521327 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
SPARC-203ENST00000521327 NKTRP30414 1462 aaKnown RBP21.02■□□□□ 0.96
SPARC-203ENST00000521327 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
SPARC-203ENST00000521327 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
SPARC-203ENST00000521327 PLEKHG1Q9ULL1 1385 aa21■□□□□ 0.95
SPARC-203ENST00000521327 ROBO1Q9Y6N7 1651 aa20.99■□□□□ 0.95
SPARC-203ENST00000521327 ZFYVE9O95405 1425 aa20.99■□□□□ 0.95
SPARC-203ENST00000521327 RIMS2Q9UQ26 1411 aa20.99■□□□□ 0.95
SPARC-203ENST00000521327 TBX22Q9Y458 520 aa20.99■□□□□ 0.95
SPARC-203ENST00000521327 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
SPARC-203ENST00000521327 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
SPARC-203ENST00000521327 C14orf37Q86TY3 774 aa20.98■□□□□ 0.95
SPARC-203ENST00000521327 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
SPARC-203ENST00000521327 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPARC-203ENST00000521327 JCADQ9P266 1359 aa20.96■□□□□ 0.95
SPARC-203ENST00000521327 C19orf44Q9H6X5 657 aa20.91■□□□□ 0.94
SPARC-203ENST00000521327 ATF3P18847 181 aa20.9■□□□□ 0.94
SPARC-203ENST00000521327 CADPS2Q86UW7 1296 aa20.9■□□□□ 0.94
SPARC-203ENST00000521327 NCOA3Q9Y6Q9 1424 aa20.89■□□□□ 0.94
SPARC-203ENST00000521327 ADAMTS13Q76LX8 1427 aa20.88■□□□□ 0.93
SPARC-203ENST00000521327 TMEM131LA2VDJ0 1609 aa20.87■□□□□ 0.93
SPARC-203ENST00000521327 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
SPARC-203ENST00000521327 SPATA31A6Q5VVP1 1343 aa20.86■□□□□ 0.93
SPARC-203ENST00000521327 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
SPARC-203ENST00000521327 PHLPP1O60346 1717 aa20.85■□□□□ 0.93
SPARC-203ENST00000521327 PIK3R4Q99570 1358 aa20.85■□□□□ 0.93
SPARC-203ENST00000521327 NUP155O75694 1391 aa20.84■□□□□ 0.93
SPARC-203ENST00000521327 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.93
SPARC-203ENST00000521327 ITGAEP38570 1179 aa20.83■□□□□ 0.93
SPARC-203ENST00000521327 ZNF772Q68DY9 489 aaPredicted RBP20.83■□□□□ 0.93
SPARC-203ENST00000521327 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.92
SPARC-203ENST00000521327 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
SPARC-203ENST00000521327 BRINP3Q76B58 766 aa20.81■□□□□ 0.92
SPARC-203ENST00000521327 LRP6O75581 1613 aa20.81■□□□□ 0.92
SPARC-203ENST00000521327 COL16A1Q07092 1604 aaPredicted RBP20.8■□□□□ 0.92
SPARC-203ENST00000521327 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
SPARC-203ENST00000521327 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
SPARC-203ENST00000521327 MYO5BQ9ULV0 1848 aa20.79■□□□□ 0.92
SPARC-203ENST00000521327 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
SPARC-203ENST00000521327 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
SPARC-203ENST00000521327 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
SPARC-203ENST00000521327 UNC13BO14795 1591 aa20.79■□□□□ 0.92
SPARC-203ENST00000521327 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
SPARC-203ENST00000521327 E9PCH4 1651 aa20.77■□□□□ 0.91
SPARC-203ENST00000521327 DIP2AQ14689 1571 aa20.76■□□□□ 0.91
SPARC-203ENST00000521327 RXRBP28702 533 aa20.75■□□□□ 0.91
SPARC-203ENST00000521327 UPF1Q92900 1129 aaKnown RBP eCLIP20.75■□□□□ 0.91
SPARC-203ENST00000521327 TRPM2O94759 1503 aa20.74■□□□□ 0.91
SPARC-203ENST00000521327 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
SPARC-203ENST00000521327 AHDC1Q5TGY3 1603 aaPredicted RBP20.74■□□□□ 0.91
SPARC-203ENST00000521327 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
SPARC-203ENST00000521327 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
SPARC-203ENST00000521327 IQGAP3Q86VI3 1631 aa20.71■□□□□ 0.91
SPARC-203ENST00000521327 METP08581 1390 aa20.71■□□□□ 0.91
SPARC-203ENST00000521327 DCCP43146 1447 aa20.7■□□□□ 0.9
SPARC-203ENST00000521327 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
SPARC-203ENST00000521327 AFF2P51816 1311 aa20.69■□□□□ 0.9
SPARC-203ENST00000521327 DDX17Q92841 729 aaKnown RBP20.68■□□□□ 0.9
SPARC-203ENST00000521327 MST1RQ04912 1400 aa20.67■□□□□ 0.9
SPARC-203ENST00000521327 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
SPARC-203ENST00000521327 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
SPARC-203ENST00000521327 SHPRHQ149N8 1683 aa20.64■□□□□ 0.9
SPARC-203ENST00000521327 C8orf37Q96NL8 207 aa20.64■□□□□ 0.89
SPARC-203ENST00000521327 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
SPARC-203ENST00000521327 QTRT2Q9H974 415 aaKnown RBP20.62■□□□□ 0.89
SPARC-203ENST00000521327 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
SPARC-203ENST00000521327 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
SPARC-203ENST00000521327 XRN1Q8IZH2 1706 aaKnown RBP20.6■□□□□ 0.89
SPARC-203ENST00000521327 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
SPARC-203ENST00000521327 RBM6P78332 1123 aaKnown RBP20.59■□□□□ 0.89
SPARC-203ENST00000521327 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
SPARC-203ENST00000521327 ADAMTS2O95450 1211 aa20.58■□□□□ 0.89
SPARC-203ENST00000521327 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
SPARC-203ENST00000521327 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
SPARC-203ENST00000521327 ORAI2Q96SN7 254 aa20.56■□□□□ 0.88
SPARC-203ENST00000521327 C1orf167Q5SNV9 1468 aa20.55■□□□□ 0.88
SPARC-203ENST00000521327 NEXMIFQ5QGS0 1516 aa20.53■□□□□ 0.88
SPARC-203ENST00000521327 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
SPARC-203ENST00000521327 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
SPARC-203ENST00000521327 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
SPARC-203ENST00000521327 RGS12O14924 1447 aa20.52■□□□□ 0.87
SPARC-203ENST00000521327 SOS2Q07890 1332 aaPredicted RBP20.52■□□□□ 0.87
SPARC-203ENST00000521327 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
SPARC-203ENST00000521327 USP21Q9UK80 565 aa20.49■□□□□ 0.87
SPARC-203ENST00000521327 NAIPQ13075 1403 aa20.48■□□□□ 0.87
SPARC-203ENST00000521327 PTCH1Q13635 1447 aa20.48■□□□□ 0.87
SPARC-203ENST00000521327 RPGRIP1LQ68CZ1 1315 aa20.48■□□□□ 0.87
SPARC-203ENST00000521327 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
SPARC-203ENST00000521327 NALCNQ8IZF0 1738 aa20.45■□□□□ 0.86
SPARC-203ENST00000521327 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
SPARC-203ENST00000521327 FNBP4Q8N3X1 1017 aaPredicted RBP20.45■□□□□ 0.86
SPARC-203ENST00000521327 TRPC5Q9UL62 973 aaPredicted RBP20.45■□□□□ 0.86
SPARC-203ENST00000521327 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
SPARC-203ENST00000521327 RRBP1Q9P2E9 1410 aaKnown RBP20.43■□□□□ 0.86
SPARC-203ENST00000521327 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
SPARC-203ENST00000521327 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
SPARC-203ENST00000521327 FOXO3O43524 673 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms