RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 BRINP3Q76B58 766 aa14.88□□□□□ -0.03
PVT1-210ENST00000521122 CADPS2Q86UW7 1296 aa14.88□□□□□ -0.03
PVT1-210ENST00000521122 LRRIQ1Q96JM4 1722 aa14.87□□□□□ -0.03
PVT1-210ENST00000521122 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
PVT1-210ENST00000521122 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
PVT1-210ENST00000521122 PNPLA6Q8IY17 1366 aa14.86□□□□□ -0.03
PVT1-210ENST00000521122 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
PVT1-210ENST00000521122 UTRNP46939 3433 aa14.85□□□□□ -0.03
PVT1-210ENST00000521122 MROH1Q8NDA8 1641 aa14.85□□□□□ -0.03
PVT1-210ENST00000521122 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
PVT1-210ENST00000521122 FNBP4Q8N3X1 1017 aaPredicted RBP14.85□□□□□ -0.03
PVT1-210ENST00000521122 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
PVT1-210ENST00000521122 UNC13BO14795 1591 aa14.84□□□□□ -0.03
PVT1-210ENST00000521122 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.83□□□□□ -0.03
PVT1-210ENST00000521122 ATF3P18847 181 aa14.83□□□□□ -0.04
PVT1-210ENST00000521122 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
PVT1-210ENST00000521122 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
PVT1-210ENST00000521122 C19orf44Q9H6X5 657 aa14.81□□□□□ -0.04
PVT1-210ENST00000521122 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
PVT1-210ENST00000521122 R3HDM1Q15032 1099 aaKnown RBP14.8□□□□□ -0.04
PVT1-210ENST00000521122 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
PVT1-210ENST00000521122 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
PVT1-210ENST00000521122 CFAP65Q6ZU64 1925 aaKnown RBP14.8□□□□□ -0.04
PVT1-210ENST00000521122 CFDP1Q9UEE9 299 aaPredicted RBP14.79□□□□□ -0.04
PVT1-210ENST00000521122 GJD4Q96KN9 370 aaPredicted RBP14.77□□□□□ -0.05
PVT1-210ENST00000521122 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
PVT1-210ENST00000521122 PTCH1Q13635 1447 aa14.76□□□□□ -0.05
PVT1-210ENST00000521122 SPHKAPQ2M3C7 1700 aa14.76□□□□□ -0.05
PVT1-210ENST00000521122 BAG6P46379 1132 aa14.76□□□□□ -0.05
PVT1-210ENST00000521122 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
PVT1-210ENST00000521122 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
PVT1-210ENST00000521122 SLC34A2O95436 690 aa14.74□□□□□ -0.05
PVT1-210ENST00000521122 EFCAB6Q5THR3 1501 aa14.74□□□□□ -0.05
PVT1-210ENST00000521122 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
PVT1-210ENST00000521122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
PVT1-210ENST00000521122 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
PVT1-210ENST00000521122 BRWD3Q6RI45 1802 aa14.72□□□□□ -0.05
PVT1-210ENST00000521122 NINLQ9Y2I6 1382 aa14.72□□□□□ -0.05
PVT1-210ENST00000521122 BCANQ96GW7 911 aa14.7□□□□□ -0.06
PVT1-210ENST00000521122 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
PVT1-210ENST00000521122 DCCP43146 1447 aa14.69□□□□□ -0.06
PVT1-210ENST00000521122 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
PVT1-210ENST00000521122 ZNF644Q9H582 1327 aaPredicted RBP14.68□□□□□ -0.06
PVT1-210ENST00000521122 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
PVT1-210ENST00000521122 GLI3P10071 1580 aa14.68□□□□□ -0.06
PVT1-210ENST00000521122 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
PVT1-210ENST00000521122 MST1RQ04912 1400 aa14.66□□□□□ -0.06
PVT1-210ENST00000521122 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
PVT1-210ENST00000521122 CEP152O94986 1710 aa14.66□□□□□ -0.06
PVT1-210ENST00000521122 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
PVT1-210ENST00000521122 PPP1R1BQ9UD71 204 aaPredicted RBP14.66□□□□□ -0.06
PVT1-210ENST00000521122 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.64□□□□□ -0.07
PVT1-210ENST00000521122 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
PVT1-210ENST00000521122 PLEKHG1Q9ULL1 1385 aa14.63□□□□□ -0.07
PVT1-210ENST00000521122 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
PVT1-210ENST00000521122 SEPT12Q8IYM1 358 aa14.63□□□□□ -0.07
PVT1-210ENST00000521122 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
PVT1-210ENST00000521122 TBX22Q9Y458 520 aa14.62□□□□□ -0.07
PVT1-210ENST00000521122 CHD4Q14839 1912 aa14.61□□□□□ -0.07
PVT1-210ENST00000521122 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
PVT1-210ENST00000521122 IDI1Q13907 227 aa14.61□□□□□ -0.07
PVT1-210ENST00000521122 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
PVT1-210ENST00000521122 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
PVT1-210ENST00000521122 COL22A1Q8NFW1 1626 aaPredicted RBP14.6□□□□□ -0.07
PVT1-210ENST00000521122 DISP2A7MBM2 1401 aa14.59□□□□□ -0.07
PVT1-210ENST00000521122 MYOM2P54296 1465 aa14.59□□□□□ -0.07
PVT1-210ENST00000521122 EIF2AK4Q9P2K8 1649 aaKnown RBP14.59□□□□□ -0.07
PVT1-210ENST00000521122 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.07
PVT1-210ENST00000521122 UNC5CLQ8IV45 518 aa14.58□□□□□ -0.08
PVT1-210ENST00000521122 SPON1Q9HCB6 807 aa14.58□□□□□ -0.08
PVT1-210ENST00000521122 SOS2Q07890 1332 aaPredicted RBP14.58□□□□□ -0.08
PVT1-210ENST00000521122 LAMC1P11047 1609 aa14.58□□□□□ -0.08
PVT1-210ENST00000521122 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
PVT1-210ENST00000521122 RGPD1P0DJD0 1748 aa14.58□□□□□ -0.08
PVT1-210ENST00000521122 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
PVT1-210ENST00000521122 ONECUT3O60422 494 aaPredicted RBP14.56□□□□□ -0.08
PVT1-210ENST00000521122 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
PVT1-210ENST00000521122 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
PVT1-210ENST00000521122 ZFYVE9O95405 1425 aa14.55□□□□□ -0.08
PVT1-210ENST00000521122 KCNQ2O43526 872 aa14.54□□□□□ -0.08
PVT1-210ENST00000521122 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
PVT1-210ENST00000521122 SLIT2O94813 1529 aa14.53□□□□□ -0.08
PVT1-210ENST00000521122 TRPM2O94759 1503 aa14.52□□□□□ -0.08
PVT1-210ENST00000521122 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.08
PVT1-210ENST00000521122 EEA1Q15075 1411 aa14.51□□□□□ -0.09
PVT1-210ENST00000521122 CAPN15O75808 1086 aa14.51□□□□□ -0.09
PVT1-210ENST00000521122 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
PVT1-210ENST00000521122 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
PVT1-210ENST00000521122 CAMKK2Q96RR4 588 aa14.5□□□□□ -0.09
PVT1-210ENST00000521122 AMOTL2Q9Y2J4 779 aa14.5□□□□□ -0.09
PVT1-210ENST00000521122 TNS1Q9HBL0 1735 aaKnown RBP14.49□□□□□ -0.09
PVT1-210ENST00000521122 TSPY4P0CV99 314 aa14.49□□□□□ -0.09
PVT1-210ENST00000521122 TSPY10P0CW01 314 aa14.49□□□□□ -0.09
PVT1-210ENST00000521122 RPRD2Q5VT52 1461 aaKnown RBP14.49□□□□□ -0.09
PVT1-210ENST00000521122 RIMS2Q9UQ26 1411 aa14.49□□□□□ -0.09
PVT1-210ENST00000521122 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
PVT1-210ENST00000521122 PTPRUQ92729 1446 aa14.48□□□□□ -0.09
PVT1-210ENST00000521122 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
PVT1-210ENST00000521122 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
PVT1-210ENST00000521122 PRELPP51888 382 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms