RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 LMTK2Q8IWU2 1503 aa17.79■□□□□ 0.44
MRPS28-206ENST00000520946 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
MRPS28-206ENST00000520946 KDM5AP29375 1690 aaKnown RBP17.79■□□□□ 0.44
MRPS28-206ENST00000520946 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
MRPS28-206ENST00000520946 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.44
MRPS28-206ENST00000520946 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
MRPS28-206ENST00000520946 ADGRB3O60242 1522 aa17.77■□□□□ 0.43
MRPS28-206ENST00000520946 NOS1P29475 1434 aa17.76■□□□□ 0.43
MRPS28-206ENST00000520946 JCADQ9P266 1359 aa17.76■□□□□ 0.43
MRPS28-206ENST00000520946 TET3O43151 1660 aa17.75■□□□□ 0.43
MRPS28-206ENST00000520946 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
MRPS28-206ENST00000520946 ATF3P18847 181 aa17.74■□□□□ 0.43
MRPS28-206ENST00000520946 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
MRPS28-206ENST00000520946 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
MRPS28-206ENST00000520946 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
MRPS28-206ENST00000520946 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
MRPS28-206ENST00000520946 CADPS2Q86UW7 1296 aa17.72■□□□□ 0.43
MRPS28-206ENST00000520946 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
MRPS28-206ENST00000520946 PHLPP1O60346 1717 aa17.71■□□□□ 0.43
MRPS28-206ENST00000520946 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
MRPS28-206ENST00000520946 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
MRPS28-206ENST00000520946 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
MRPS28-206ENST00000520946 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
MRPS28-206ENST00000520946 SPATA31A6Q5VVP1 1343 aa17.68■□□□□ 0.42
MRPS28-206ENST00000520946 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
MRPS28-206ENST00000520946 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
MRPS28-206ENST00000520946 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
MRPS28-206ENST00000520946 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
MRPS28-206ENST00000520946 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
MRPS28-206ENST00000520946 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
MRPS28-206ENST00000520946 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
MRPS28-206ENST00000520946 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.41
MRPS28-206ENST00000520946 AMOTL2Q9Y2J4 779 aa17.63■□□□□ 0.41
MRPS28-206ENST00000520946 ITGAEP38570 1179 aa17.62■□□□□ 0.41
MRPS28-206ENST00000520946 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
MRPS28-206ENST00000520946 MYO5BQ9ULV0 1848 aa17.62■□□□□ 0.41
MRPS28-206ENST00000520946 RXRBP28702 533 aa17.61■□□□□ 0.41
MRPS28-206ENST00000520946 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
MRPS28-206ENST00000520946 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
MRPS28-206ENST00000520946 NUP155O75694 1391 aa17.6■□□□□ 0.41
MRPS28-206ENST00000520946 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.4
MRPS28-206ENST00000520946 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
MRPS28-206ENST00000520946 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
MRPS28-206ENST00000520946 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
MRPS28-206ENST00000520946 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
MRPS28-206ENST00000520946 TRPM2O94759 1503 aa17.57■□□□□ 0.4
MRPS28-206ENST00000520946 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.55■□□□□ 0.4
MRPS28-206ENST00000520946 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.4
MRPS28-206ENST00000520946 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
MRPS28-206ENST00000520946 LRP6O75581 1613 aa17.54■□□□□ 0.4
MRPS28-206ENST00000520946 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
MRPS28-206ENST00000520946 UNC13BO14795 1591 aa17.53■□□□□ 0.4
MRPS28-206ENST00000520946 E9PCH4 1651 aa17.53■□□□□ 0.4
MRPS28-206ENST00000520946 AHDC1Q5TGY3 1603 aaPredicted RBP17.52■□□□□ 0.4
MRPS28-206ENST00000520946 AFF2P51816 1311 aa17.51■□□□□ 0.39
MRPS28-206ENST00000520946 C8orf37Q96NL8 207 aa17.51■□□□□ 0.39
MRPS28-206ENST00000520946 SHPRHQ149N8 1683 aa17.49■□□□□ 0.39
MRPS28-206ENST00000520946 DCCP43146 1447 aa17.49■□□□□ 0.39
MRPS28-206ENST00000520946 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
MRPS28-206ENST00000520946 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
MRPS28-206ENST00000520946 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
MRPS28-206ENST00000520946 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
MRPS28-206ENST00000520946 ASXL1Q8IXJ9 1541 aa17.46■□□□□ 0.39
MRPS28-206ENST00000520946 ADAMTS2O95450 1211 aa17.45■□□□□ 0.38
MRPS28-206ENST00000520946 RBM6P78332 1123 aaKnown RBP17.45■□□□□ 0.38
MRPS28-206ENST00000520946 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
MRPS28-206ENST00000520946 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
MRPS28-206ENST00000520946 METP08581 1390 aa17.44■□□□□ 0.38
MRPS28-206ENST00000520946 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
MRPS28-206ENST00000520946 MST1RQ04912 1400 aa17.43■□□□□ 0.38
MRPS28-206ENST00000520946 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
MRPS28-206ENST00000520946 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
MRPS28-206ENST00000520946 FOXD1Q16676 465 aa17.41■□□□□ 0.38
MRPS28-206ENST00000520946 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
MRPS28-206ENST00000520946 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
MRPS28-206ENST00000520946 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
MRPS28-206ENST00000520946 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
MRPS28-206ENST00000520946 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
MRPS28-206ENST00000520946 USP21Q9UK80 565 aa17.37■□□□□ 0.37
MRPS28-206ENST00000520946 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
MRPS28-206ENST00000520946 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
MRPS28-206ENST00000520946 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
MRPS28-206ENST00000520946 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
MRPS28-206ENST00000520946 RGS12O14924 1447 aa17.34■□□□□ 0.37
MRPS28-206ENST00000520946 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
MRPS28-206ENST00000520946 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.36
MRPS28-206ENST00000520946 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
MRPS28-206ENST00000520946 KIF1BO60333 1816 aa17.31■□□□□ 0.36
MRPS28-206ENST00000520946 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
MRPS28-206ENST00000520946 NEXMIFQ5QGS0 1516 aa17.31■□□□□ 0.36
MRPS28-206ENST00000520946 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
MRPS28-206ENST00000520946 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
MRPS28-206ENST00000520946 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
MRPS28-206ENST00000520946 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
MRPS28-206ENST00000520946 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
MRPS28-206ENST00000520946 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
MRPS28-206ENST00000520946 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
MRPS28-206ENST00000520946 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
MRPS28-206ENST00000520946 HFM1A2PYH4 1435 aa17.27■□□□□ 0.35
MRPS28-206ENST00000520946 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms